RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 KDM6AO15550 1401 aaPredicted RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 PDXDC1Q6P996 788 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 CYFIP1Q7L576 1253 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 VCX3BQ9H321 246 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 IPO11Q9UI26 975 aaKnown RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 PODXLO00592 558 aa15□□□□□ -0.01
CDH3-201ENST00000264012 YWHABP31946 246 aaKnown RBP15□□□□□ -0.01
CDH3-201ENST00000264012 EIF3BP55884 814 aaKnown RBP15□□□□□ -0.01
CDH3-201ENST00000264012 TERF2Q15554 542 aa15□□□□□ -0.01
CDH3-201ENST00000264012 NFRKBQ6P4R8 1299 aa15□□□□□ -0.01
CDH3-201ENST00000264012 CCDC197Q8NCU1 140 aa15□□□□□ -0.01
CDH3-201ENST00000264012 TEX13BQ9BXU2 312 aa15□□□□□ -0.01
CDH3-201ENST00000264012 EFCC1Q9HA90 598 aa15□□□□□ -0.01
CDH3-201ENST00000264012 JPH1Q9HDC5 661 aaPredicted RBP15□□□□□ -0.01
CDH3-201ENST00000264012 EXOC1LA0A1B0GW35 172 aa15□□□□□ -0.01
CDH3-201ENST00000264012 ZBED1O96006 694 aa15□□□□□ -0.01
CDH3-201ENST00000264012 ARPP19P56211 112 aa15□□□□□ -0.01
CDH3-201ENST00000264012 GLYCTKQ8IVS8 523 aa15□□□□□ -0.01
CDH3-201ENST00000264012 PDIK1LQ8N165 341 aa15□□□□□ -0.01
CDH3-201ENST00000264012 SPATA33Q96N06 139 aa15□□□□□ -0.01
CDH3-201ENST00000264012 OSBPL9Q96SU4 736 aa15□□□□□ -0.01
CDH3-201ENST00000264012 MMP19Q99542 508 aa15□□□□□ -0.01
CDH3-201ENST00000264012 DNAJC17Q9NVM6 304 aaKnown RBP15□□□□□ -0.01
CDH3-201ENST00000264012 SNX24Q9Y343 169 aa15□□□□□ -0.01
CDH3-201ENST00000264012 ARHGAP42A6NI28 874 aa15□□□□□ -0.01
CDH3-201ENST00000264012 MYMKA6NI61 221 aa15□□□□□ -0.01
CDH3-201ENST00000264012 TJP3O95049 919 aa15□□□□□ -0.01
CDH3-201ENST00000264012 FTLP02792 175 aaPredicted RBP15□□□□□ -0.01
CDH3-201ENST00000264012 TBXAS1P24557 533 aaPredicted RBP15□□□□□ -0.01
CDH3-201ENST00000264012 GPC3P51654 580 aa15□□□□□ -0.01
CDH3-201ENST00000264012 BAATQ14032 418 aaPredicted RBP15□□□□□ -0.01
CDH3-201ENST00000264012 MRPL4Q9BYD3 311 aaKnown RBP15□□□□□ -0.01
CDH3-201ENST00000264012 NCK2O43639 380 aa15□□□□□ -0.01
CDH3-201ENST00000264012 SMARCA1P28370 1054 aa15□□□□□ -0.01
CDH3-201ENST00000264012 KIAA1841Q6NSI8 718 aa15□□□□□ -0.01
CDH3-201ENST00000264012 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
CDH3-201ENST00000264012 GSTA1P08263 222 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 GSTA2P09210 222 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 HSPH1Q92598 858 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 SH2D3AQ9BRG2 576 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 HEMGNQ9BXL5 484 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 HDAC6Q9UBN7 1215 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 SLC12A6Q9UHW9 1150 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 PSMD14O00487 310 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 CALB1P05937 261 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 NR1D1P20393 614 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 IFT88Q13099 833 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 SLC10A5Q5PT55 438 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 GPD1LQ8N335 351 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 ZNF564Q8TBZ8 553 aaPredicted RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 RBM41Q96IZ5 413 aaKnown RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 RAB3IPQ96QF0 476 aaPredicted RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 RBAKQ9NYW8 714 aaPredicted RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 ATP8B3O60423 1300 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 SALL3Q9BXA9 1300 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 GNAT1P11488 350 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 PPP6R3Q5H9R7 873 aaPredicted RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 STYK1Q6J9G0 422 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 FBXL13Q8NEE6 735 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 REEP2Q9BRK0 252 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 AGO2Q9UKV8 859 aaKnown RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 NOL3O60936 208 aaKnown RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 ACSL3O95573 720 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 MT-ND3P03897 115 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 RAPH1Q70E73 1250 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 CNOT10Q9H9A5 744 aaKnown RBP14.99□□□□□ -0.01
CDH3-201ENST00000264012 SMYD2Q9NRG4 433 aa14.99□□□□□ -0.01
CDH3-201ENST00000264012 FGFR2P21802 821 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 TWF2Q6IBS0 349 aaKnown RBP14.98□□□□□ -0.01
CDH3-201ENST00000264012 NUP85Q9BW27 656 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 VWDEQ8N2E2 1590 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 COPB2P35606 906 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 SOX5P35711 763 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 MAP2K2P36507 400 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 GRIN1Q05586 938 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 CENPUQ71F23 418 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 RNF139Q8WU17 664 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 BCAP29Q9UHQ4 241 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 NCOA3Q9Y6Q9 1424 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 CALR3Q96L12 384 aaKnown RBP14.98□□□□□ -0.01
CDH3-201ENST00000264012 STRIP2Q9ULQ0 834 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 MAGED2Q9UNF1 606 aaPredicted RBP14.98□□□□□ -0.01
CDH3-201ENST00000264012 UBE4BO95155 1302 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 ESYT2A0FGR8 921 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 SRGNP10124 158 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 GNA15P30679 374 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 ZNF211Q13398 564 aaPredicted RBP14.98□□□□□ -0.01
CDH3-201ENST00000264012 ENOSF1Q7L5Y1 443 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 ZNF280CQ8ND82 737 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 ENGASEQ8NFI3 743 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 PYROXD1Q8WU10 500 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 VCXQ9H320 206 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 PXDNQ92626 1479 aa14.98□□□□□ -0.01
CDH3-201ENST00000264012 TYW5A2RUC4 315 aaKnown RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 STAT5BP51692 787 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 CC2D1AQ6P1N0 951 aaPredicted RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 C4orf50Q6ZRC1 276 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 RBM46Q8TBY0 533 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms