RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 EOMESO95936 686 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
USE1-201ENST00000263897 MCM7P33993 719 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 NEK9Q8TD19 979 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 TMEM143Q96AN5 459 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 NLRP4Q96MN2 994 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 TMEM117Q9H0C3 514 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 RNF19AQ9NV58 838 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 PCDHB12Q9Y5F1 795 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 ASAP2O43150 1006 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 NCK2O43639 380 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 GAS2O43903 313 aaKnown RBP17.95■□□□□ 0.46
USE1-201ENST00000263897 KCNA5P22460 613 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 DNAJB1P25685 340 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 COL19A1Q14993 1142 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 ZNF174Q15697 407 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 LEXMQ3ZCV2 418 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 SPOUT1Q5T280 376 aaKnown RBP17.95■□□□□ 0.46
USE1-201ENST00000263897 ZNF598Q86UK7 904 aaKnown RBP17.95■□□□□ 0.46
USE1-201ENST00000263897 TCP11Q8WWU5 503 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 PSPC1Q8WXF1 523 aaKnown RBP17.95■□□□□ 0.46
USE1-201ENST00000263897 TRAIPQ9BWF2 469 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 CWH43Q9H720 699 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 ANKEF1Q9NU02 776 aa17.95■□□□□ 0.46
USE1-201ENST00000263897 ST18O60284 1047 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 SRGAP2CP0DJJ0 459 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 XRCC6P12956 609 aaKnown RBP eCLIP17.94■□□□□ 0.46
USE1-201ENST00000263897 LAMTOR4Q0VGL1 99 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 ORC2Q13416 577 aaPredicted RBP17.94■□□□□ 0.46
USE1-201ENST00000263897 EMC2Q15006 297 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 LRRC55Q6ZSA7 311 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 CATSPER4Q7RTX7 472 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 SRGAP1Q7Z6B7 1085 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 NOSTRINQ8IVI9 506 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 RNF169Q8NCN4 708 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 PABPC5Q96DU9 382 aaKnown RBP17.94■□□□□ 0.46
USE1-201ENST00000263897 NECAB3Q96P71 396 aaPredicted RBP17.94■□□□□ 0.46
USE1-201ENST00000263897 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
USE1-201ENST00000263897 ATG2AQ2TAZ0 1938 aa17.94■□□□□ 0.46
USE1-201ENST00000263897 POTEMA6NI47 508 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 SPATA31C1P0DKV0 1188 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 U2AF2P26368 475 aaKnown RBP eCLIP17.93■□□□□ 0.46
USE1-201ENST00000263897 GNL2Q13823 731 aaKnown RBP17.93■□□□□ 0.46
USE1-201ENST00000263897 CSPP1Q1MSJ5 1256 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 FERMT3Q86UX7 667 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 ABI1Q8IZP0 508 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 COLGALT1Q8NBJ5 622 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
USE1-201ENST00000263897 POF1BQ8WVV4 589 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 MTRQ99707 1265 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 XPNPEP1Q9NQW7 623 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 BMP2KQ9NSY1 1161 aaPredicted RBP17.93■□□□□ 0.46
USE1-201ENST00000263897 HCSTQ9UBK5 93 aa17.93■□□□□ 0.46
USE1-201ENST00000263897 A0A087WWV3 80 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 ATF7P17544 494 aaPredicted RBP17.92■□□□□ 0.46
USE1-201ENST00000263897 LAG3P18627 525 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 TECP42680 631 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 PHKA2P46019 1235 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 TRAPPC10P48553 1259 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 UBE3AQ05086 875 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 HYAL1Q12794 435 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 CLLU1OSQ5K130 101 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 TTC38Q5R3I4 469 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 TWF2Q6IBS0 349 aaKnown RBP17.92■□□□□ 0.46
USE1-201ENST00000263897 EP400NLQ6ZTU2 488 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 CATSPER3Q86XQ3 398 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 PIGOQ8TEQ8 1089 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 MINDY3Q9H8M7 445 aa17.92■□□□□ 0.46
USE1-201ENST00000263897 PIN4Q9Y237 131 aaKnown RBP17.92■□□□□ 0.46
USE1-201ENST00000263897 SPTBN5Q9NRC6 3674 aaKnown RBP17.92■□□□□ 0.46
USE1-201ENST00000263897 ARID2Q68CP9 1835 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 ZNF623O75123 536 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 DGAT1O75907 488 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 FGF18O76093 207 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 OR52Z1P0C646 297 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 SKIP12755 728 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 IRS1P35568 1242 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 LTBRP36941 435 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 RARRES1P49788 294 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 MXD4Q14582 209 aaPredicted RBP17.91■□□□□ 0.46
USE1-201ENST00000263897 THNSL1Q8IYQ7 743 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 C4orf32Q8N8J7 132 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 RNF149Q8NC42 400 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 HELQQ8TDG4 1101 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 TMX3Q96JJ7 454 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 POLR3CQ9BUI4 534 aaPredicted RBP17.91■□□□□ 0.46
USE1-201ENST00000263897 TUFT1Q9NNX1 390 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 CLDND1Q9NY35 253 aa17.91■□□□□ 0.46
USE1-201ENST00000263897 NOL7Q9UMY1 257 aaKnown RBP17.91■□□□□ 0.46
USE1-201ENST00000263897 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 H3BQ06 376 aaPredicted RBP17.9■□□□□ 0.46
USE1-201ENST00000263897 CSPG5O95196 566 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 GTF2F1P35269 517 aaKnown RBP eCLIP17.9■□□□□ 0.46
USE1-201ENST00000263897 POU5F1BQ06416 359 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 ADAM15Q13444 863 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms