RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TRIM72Q6ZMU5 477 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 PIK3R2O00459 728 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 ADGRL3Q9HAR2 1447 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 CDC25AP30304 524 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 SEL1LQ9UBV2 794 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 HEG1Q9ULI3 1381 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 TARSL2A2RTX5 802 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 RCAN1P53805 252 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 ZNF667Q5HYK9 610 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 TGS1Q96RS0 853 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 NGRNQ9NPE2 291 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 RFX7Q2KHR2 1363 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 PROSER3Q2NL68 480 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 RARS2Q5T160 578 aaKnown RBP18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 OR9Q1Q8NGQ5 310 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 ASPSCR1Q9BZE9 553 aa18.61■□□□□ 0.57
NOTCH3-201ENST00000263388 CDK8P49336 464 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 CATSPER1Q8NEC5 780 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 GRAMD1AQ96CP6 724 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 PEX3P56589 373 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 PTPN21Q16825 1174 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 IMPG1Q17R60 797 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 TBC1D1Q86TI0 1168 aaPredicted RBP18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 THEM5Q8N1Q8 247 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 LZICQ8WZA0 190 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 OSBP2Q969R2 916 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 OLFM3Q96PB7 478 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 NUP85Q9BW27 656 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 USP17L3A6NCW0 530 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 USP17L4A6NCW7 530 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 NR3C1P04150 777 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 MYBL1P10243 752 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 USP17L1Q7RTZ2 530 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 BAG6P46379 1132 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 CDC26Q8NHZ8 85 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 POLE3Q9NRF9 147 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 TNFAIP2Q03169 654 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 CHRNA3P32297 505 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 LRRC8BQ6P9F7 803 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 ANO5Q75V66 913 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 PFASO15067 1338 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 USP17L8P0C7I0 530 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 ATP1A3P13637 1013 aa18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 MRPL28Q13084 256 aaKnown RBP18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 FNDC3AQ9Y2H6 1198 aaKnown RBP18.6■□□□□ 0.57
NOTCH3-201ENST00000263388 OSTNP61366 133 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 EFTUD2Q15029 972 aaKnown RBP eCLIP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 PPP6R3Q5H9R7 873 aaPredicted RBP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 KIAA1755Q5JYT7 1200 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 RNF217Q8TC41 542 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 SAAL1Q96ER3 474 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 COG4Q9H9E3 785 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 SNX5Q9Y5X3 404 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 CLTCL1P53675 1640 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 ARHGAP10A1A4S6 786 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 CTIFO43310 598 aaKnown RBP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 TAP1Q03518 808 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 TMEM179Q6ZVK1 233 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 XXYLT1Q8NBI6 393 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 GRIN1Q05586 938 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 MTMR1Q13613 665 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 E2F4Q16254 413 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 SNF8Q96H20 258 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 ATP6V0A4Q9HBG4 840 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 TRPC5Q9UL62 973 aaPredicted RBP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 DIAPH2O60879 1101 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 PPP1R18Q6NYC8 613 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 FAM95CA0A1B0GW59 222 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 ASAP2O43150 1006 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 TMEM35BQ8NCS4 154 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 CNOT8Q9UFF9 292 aaKnown RBP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 GNAT1P11488 350 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 PMS2P54278 862 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 TTC39CQ8N584 583 aa18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 EML4Q9HC35 981 aaKnown RBP18.59■□□□□ 0.57
NOTCH3-201ENST00000263388 GDF11O95390 407 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 FAM167AQ96KS9 214 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 HEY1Q9Y5J3 304 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 CLRN2A0PK11 232 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 ASNSP08243 561 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 AARSP49588 968 aaKnown RBP eCLIP18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 KCNH2Q12809 1159 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 TFDP2Q14188 446 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 IFT43Q96FT9 208 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 BTBD6Q96KE9 485 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 BRIP1Q9BX63 1249 aa18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 BSDC1Q9NW68 430 aaPredicted RBP18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 DDX56Q9NY93 547 aaKnown RBP18.58■□□□□ 0.57
NOTCH3-201ENST00000263388 GPS1Q13098 491 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 UBE2SQ16763 222 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 DYDC2Q96IM9 177 aa18.58■□□□□ 0.56
NOTCH3-201ENST00000263388 ARHGAP26Q9UNA1 814 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms