RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 OTUD6AQ7L8S5 288 aa9□□□□□ -0.97
LDB3-201ENST00000263066 SCUBE1Q8IWY4 988 aa9□□□□□ -0.97
LDB3-201ENST00000263066 SERBP1Q8NC51 408 aaKnown RBP eCLIP9□□□□□ -0.97
LDB3-201ENST00000263066 TRAPPC9Q96Q05 1148 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CRAMP1Q96RY5 1269 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CORO1BQ9BR76 489 aa9□□□□□ -0.97
LDB3-201ENST00000263066 EXOC1Q9NV70 894 aa9□□□□□ -0.97
LDB3-201ENST00000263066 ETNK2Q9NVF9 386 aa9□□□□□ -0.97
LDB3-201ENST00000263066 NKIRAS1Q9NYS0 192 aa9□□□□□ -0.97
LDB3-201ENST00000263066 SERPINB13Q9UIV8 391 aa9□□□□□ -0.97
LDB3-201ENST00000263066 GGA2Q9UJY4 613 aa9□□□□□ -0.97
LDB3-201ENST00000263066 GINS2Q9Y248 185 aa9□□□□□ -0.97
LDB3-201ENST00000263066 CCDC194A0A1B0GVG4 234 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 GSTTP1A0A1W2PQM5 241 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 FOXN1O15353 648 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 KRT18P05783 430 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 FAM153BP0C7A2 387 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 ATP6V1C1P21283 382 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 PEX5P50542 639 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TRIM14Q14142 442 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 MYBPC2Q14324 1141 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 FAM153CQ494X1 144 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 LRRC8BQ6P9F7 803 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 C1orf228Q6PIY5 440 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 PIGOQ8TEQ8 1089 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 UCMAQ8WVF2 138 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 GPKOWQ92917 476 aaPredicted RBP eCLIP8.99□□□□□ -0.97
LDB3-201ENST00000263066 IQCDQ96DY2 449 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 CLIC5Q9NZA1 410 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 FAM153AQ9UHL3 310 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 DOLKQ9UPQ8 538 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TNKSO95271 1327 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 LTBP4Q8N2S1 1624 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 POTEFA5A3E0 1075 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 DDX39AO00148 427 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 ACTN4O43707 911 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 GSTA1P08263 222 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 LMNB1P20700 586 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 PHBP35232 272 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 SPP2Q13103 211 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 LRRC36Q1X8D7 754 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 KANK3Q6NY19 840 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 ENOX1Q8TC92 643 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 MS4A14Q96JA4 679 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 NOX5Q96PH1 765 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 ZHX2Q9Y6X8 837 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 KIF1AQ12756 1690 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TRIM64CA6NLI5 447 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 ONECUT3O60422 494 aaPredicted RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 LCA5LO95447 670 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TUBP50607 506 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 EVX2Q03828 476 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
LDB3-201ENST00000263066 IRGCQ6NXR0 463 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TMEM53Q6P2H8 277 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 MOB2Q70IA6 237 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TAOK1Q7L7X3 1001 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 TMEM139Q8IV31 216 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 IQCF2Q8IXL9 164 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 LRRC43Q8N309 656 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 CXorf38Q8TB03 319 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 PIP4K2CQ8TBX8 421 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 EIF2AQ9BY44 585 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 DNAJC17Q9NVM6 304 aaKnown RBP8.99□□□□□ -0.97
LDB3-201ENST00000263066 EURLQ9NYK6 297 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 MAN1B1Q9UKM7 699 aa8.99□□□□□ -0.97
LDB3-201ENST00000263066 PALM3A6NDB9 673 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 MYCLP1P12525 358 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 ALAS1P13196 640 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 TM4SF1P30408 202 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 RNASELQ05823 741 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 EHHADHQ08426 723 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 ABCB5Q2M3G0 1257 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 SPATA1Q5VX52 437 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 PPP1R21Q6ZMI0 780 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 USP33Q8TEY7 942 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 CCT6BQ92526 530 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 LENG1Q96BZ8 264 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 ERLEC1Q96DZ1 483 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 DNAJC1Q96KC8 554 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 TTC1Q99614 292 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 BEGAINQ9BUH8 593 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 RBM12Q9NTZ6 932 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 FGFR1OP2Q9NVK5 253 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 DKK3Q9UBP4 350 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 SATB2Q9UPW6 733 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 DAGLAQ9Y4D2 1042 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 PDE2AO00408 941 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 EPB41P11171 864 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 MYCLP12524 364 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 CALB2P22676 271 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 PLCD1P51178 756 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 RIPK1Q13546 671 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 SH3GL1Q99961 368 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 MLXIPQ9HAP2 919 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 NLRC4Q9NPP4 1024 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 VPS54Q9P1Q0 977 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 SUN2Q9UH99 717 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 FBXL5Q9UKA1 691 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms