RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 TBC1D22AQ8WUA7 517 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 DDX23Q9BUQ8 820 aaKnown RBP15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 PAPPAQ13219 1627 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 SHANK3Q9BYB0 1731 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 ESYT2A0FGR8 921 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 TISP43B9A030 160 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 BIRC3Q13489 604 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 SLC29A2Q14542 456 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 TMED2Q15363 201 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 ZCWPW2Q504Y3 356 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 IQCKQ8N0W5 287 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 FGFR1OP2Q9NVK5 253 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 DDX60Q8IY21 1712 aaKnown RBP15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 CASZ1Q86V15 1759 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 EML1O00423 815 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 SPAG7O75391 227 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 GPATCH4Q5T3I0 446 aaKnown RBP15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 TEKT1Q969V4 418 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 DYDC2Q96IM9 177 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 BTBD6Q96KE9 485 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 LRRC4CQ9HCJ2 640 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 GDF3Q9NR23 364 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 TAS2R14Q9NYV8 317 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 KLHL14Q9P2G3 628 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 F5H6K3 240 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 FAM107AO95990 144 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 KLRC3Q07444 240 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 QPCTQ16769 361 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 PPP4R3AQ6IN85 833 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 TPCN2Q8NHX9 752 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 CHMP6Q96FZ7 201 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 GANQ9H2C0 597 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 KCTD10Q9H3F6 313 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 DDTLA6NHG4 134 aaPredicted RBP15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 HIP1RO75146 1068 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 EPC2Q52LR7 807 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 DDX20Q9UHI6 824 aaKnown RBP15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 GOLGA8SH3BPF8 625 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 GOLGA8MH3BSY2 632 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 GH2P01242 217 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 SLC20A2Q08357 652 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 GLE1Q53GS7 698 aaKnown RBP15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 IRF2BP2Q7Z5L9 587 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 SYCE1Q8N0S2 351 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 TRIM6Q9C030 488 aaPredicted RBP15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 PPP1R9AQ9ULJ8 1098 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 BCORQ6W2J9 1755 aa15.1■□□□□ 0.01
TUBGCP3-201ENST00000261965 DDX3XO00571 662 aaKnown RBP eCLIP15.09■□□□□ 0.015e-7■■■■■ 27.4
TUBGCP3-201ENST00000261965 GCLMP48507 274 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 USP11P51784 963 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 TAF11Q15544 211 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 TAOK1Q7L7X3 1001 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 SLC35G2Q8TBE7 412 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 EPS8L3Q8TE67 593 aaKnown RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 NSMCE1Q8WV22 266 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 CAVIN3Q969G5 261 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 FAM84AQ96KN4 292 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 SH3GL2Q99962 352 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 AMNQ9BXJ7 453 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 DCTN4Q9UJW0 460 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 USP21Q9UK80 565 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 LRRC34Q8IZ02 419 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 PRCCQ92733 491 aaPredicted RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 STAMBPL1Q96FJ0 436 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 EIF2AK1Q9BQI3 630 aaKnown RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 CCDC77Q9BR77 488 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.09■□□□□ 0.011e-6■■■□□ 15.4
TUBGCP3-201ENST00000261965 HOMER3Q9NSC5 361 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 PPP1R1BQ9UD71 204 aaPredicted RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 CLRN2A0PK11 232 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 ARHGEF35A5YM69 484 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 PIK3R5Q8WYR1 880 aa15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 TDRD3Q9H7E2 651 aaKnown RBP15.09■□□□□ 0.01
TUBGCP3-201ENST00000261965 DOT1LQ8TEK3 1739 aa15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 GCFC2P16383 781 aaKnown RBP15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 IFI35P80217 286 aaPredicted RBP15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 NAIF1Q69YI7 327 aaPredicted RBP15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 FBXO25Q8TCJ0 367 aa15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 C9orf72Q96LT7 481 aa15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 ETNK1Q9HBU6 452 aa15.08■□□□□ 0.01
TUBGCP3-201ENST00000261965 DOCK2Q92608 1830 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 LGR5O75473 907 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 LCA5LO95447 670 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 SLC8A1P32418 973 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 PMS2P54278 862 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 TTC16Q8NEE8 873 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 SLC30A5Q8TAD4 765 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 IFT74Q96LB3 600 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 TCHPQ9BT92 498 aa15.08■□□□□ 0
TUBGCP3-201ENST00000261965 KLHL11Q9NVR0 708 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms