RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 NPHS2Q9NP85 383 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ADA2Q9NZK5 511 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 CHMP2BQ9UQN3 213 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ANP32DO95626 131 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 ALDH18A1P54886 795 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 MED21Q13503 144 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 TAF12Q16514 161 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 HABP4Q5JVS0 413 aaKnown RBP10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 FOXR1Q6PIV2 292 aa10.41□□□□□ -0.74
CTDSPL2-201ENST00000260327 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 GSG1L2A8MUP6 293 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 GNAT1P11488 350 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 CARSP49589 748 aaKnown RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 TSPY1Q01534 308 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 SLC44A5Q8NCS7 719 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 SLC13A1Q9BZW2 595 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 SLAIN2Q9P270 581 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCPG1Q9ULG6 757 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 ABCA6Q8N139 1617 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 LRRIQ3A6PVS8 624 aaPredicted RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 GOLGA8RI6L899 631 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 CAPN9O14815 690 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 CYP27B1O15528 508 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 LPXNO60711 386 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 FDPSP14324 419 aaKnown RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 FOXO4P98177 505 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 DLGAP5Q15398 846 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 ACCSQ96QU6 501 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 WDR19Q8NEZ3 1342 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 TTI1O43156 1089 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 FAM107AO95990 144 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 S100BP04271 92 aaPredicted RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCDC159P0C7I6 412 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 TMEM191BP0C7N4 346 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 MXI1P50539 228 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 KIF19Q2TAC6 998 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 STAG2Q8N3U4 1231 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 LARGE2Q8N3Y3 721 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 SGSM3Q96HU1 749 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 RIOK1Q9BRS2 568 aaKnown RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 ADD3Q9UEY8 706 aaKnown RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 ATXN3P54252 364 aaPredicted RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 COASYQ13057 564 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 DNAJC24Q6P3W2 148 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 CCDC137Q6PK04 289 aaKnown RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 AGR3Q8TD06 166 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 SH3RF3Q8TEJ3 882 aaPredicted RBP10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 C1orf54Q8WWF1 131 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 PIGBQ92521 554 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 TRIM11Q96F44 468 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 AXIN2Q9Y2T1 843 aa10.4□□□□□ -0.74
CTDSPL2-201ENST00000260327 PLEKHG1Q9ULL1 1385 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 PRDX5P30044 214 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 CNGA3Q16281 694 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 SLC44A4Q53GD3 710 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 BTBD6Q96KE9 485 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 SENP2Q9HC62 589 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 UBN1Q9NPG3 1134 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 ANAPC7Q9UJX3 599 aa10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP42Q9H9J4 1324 aaKnown RBP10.4□□□□□ -0.75
CTDSPL2-201ENST00000260327 USP17L5A8MUK1 530 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 P4HA1P13674 534 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 DDX42Q86XP3 938 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 RHOT2Q8IXI1 618 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 LRRN4CLQ8ND94 238 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 FAF2Q96CS3 445 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SH3GLB2Q9NR46 395 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SEPT9Q9UHD8 586 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 WDR64B1ANS9 1081 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 IPO5O00410 1097 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 TNNC2P02585 160 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 BPIFB4P59827 614 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ATP2C1P98194 919 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 GRIN1Q05586 938 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 IFRD2Q12894 506 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SFR1Q86XK3 245 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 EXT2Q93063 718 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 NACC1Q96RE7 527 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 MED10Q9BTT4 135 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SERPINB13Q9UIV8 391 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 DIS3Q9Y2L1 958 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 KRT37O76014 449 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ATG9AQ7Z3C6 839 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 REXO1L1PQ8IX06 675 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZBED8Q8IZ13 594 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SPDYE1Q8NFV5 336 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 HSPH1Q92598 858 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 RAD54LQ92698 747 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 KMT5AQ9NQR1 393 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 TUBE1Q9UJT0 475 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ARHGEF40Q8TER5 1519 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 UBAP1LF5GYI3 381 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 H3BRJ5 948 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 SYF2O95926 243 aaKnown RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 ZNF746Q6NUN9 644 aaPredicted RBP10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 TRIM59Q8IWR1 403 aa10.39□□□□□ -0.75
CTDSPL2-201ENST00000260327 RYBPQ8N488 228 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms