RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 STK32AQ8WU08 396 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 NACC2Q96BF6 587 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 EVI5LQ96CN4 794 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 TRIM11Q96F44 468 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CAPNS2Q96L46 248 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 FSD1Q9BTV5 496 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 ARMT1Q9H993 441 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 ITM2BQ9Y287 266 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
CCNA1-201ENST00000255465 DDX60LQ5H9U9 1706 aaKnown RBP12.78□□□□□ -0.36
CCNA1-201ENST00000255465 TRIM43BA6NCK2 446 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 EIF3FO00303 357 aaPredicted RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 O00370 1275 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 KRT86O43790 486 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ATP5HO75947 161 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 KRT14P02533 472 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ITGA2BP08514 1039 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ECE1P42892 770 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ZNF157P51786 506 aaPredicted RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 MCL1Q07820 350 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 GRM1Q13255 1194 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 STK38Q15208 465 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 PDCD4Q53EL6 469 aaKnown RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ERMARDQ5T6L9 678 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 DCAF15Q66K64 600 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ANKK1Q8NFD2 765 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 HAUS1Q96CS2 278 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 FAM129AQ9BZQ8 928 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 MRPL46Q9H2W6 279 aaKnown RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 FAM114A2Q9NRY5 505 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 SCHIP1Q9P0W5 487 aaPredicted RBP12.77□□□□□ -0.37
CCNA1-201ENST00000255465 DKK3Q9UBP4 350 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 EFR3BQ9Y2G0 817 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 ATAD5Q96QE3 1844 aa12.77□□□□□ -0.37
CCNA1-201ENST00000255465 MAP3K13O43283 966 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 GEMIN4P57678 1058 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 COPS2P61201 443 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 HPCAP84074 193 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 OCRLQ01968 901 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 RBL2Q08999 1139 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 BNIP1Q12981 228 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 MTMR3Q13615 1198 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 ITGA9Q13797 1035 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 ASRGL1Q7L266 308 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 DIS3LQ8TF46 1054 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 APPBP2Q92624 585 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 EPB41L1Q9H4G0 881 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 RHBDL2Q9NX52 303 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 CYP39A1Q9NYL5 469 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 THSD7BQ9C0I4 1608 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 LAMB1P07942 1786 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 UNCXA6NJT0 531 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 SPTLC2O15270 562 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 ATP1A1P05023 1023 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 RARAP10276 462 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 PMS2P54278 862 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 CDK17Q00537 523 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 MAP3K10Q02779 954 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 FOXB2Q5VYV0 432 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 GRAMD4Q6IC98 578 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 ANKRD13AQ8IZ07 590 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 ATP6V0A1Q93050 837 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 AIDAQ96BJ3 306 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 LRRC45Q96CN5 670 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 KLHL29Q96CT2 875 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 XPO6Q96QU8 1125 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 ZNF341Q9BYN7 854 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 DHX36Q9H2U1 1008 aaKnown RBP12.76□□□□□ -0.37
CCNA1-201ENST00000255465 RABL2BQ9UNT1 228 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 HPSEQ9Y251 543 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 FADS3Q9Y5Q0 445 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 MYH8P13535 1937 aa12.76□□□□□ -0.37
CCNA1-201ENST00000255465 A0A0J9YVX5 310 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 CYTH3O43739 400 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 MGEA5O60502 916 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 ZMYND10O75800 440 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 EIF2S1P05198 315 aaKnown RBP12.75□□□□□ -0.37
CCNA1-201ENST00000255465 SLURP2P0DP57 97 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 CACNA2D1P54289 1103 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCNA1-201ENST00000255465 CNGA3Q16281 694 aa12.75□□□□□ -0.37
CCNA1-201ENST00000255465 RASIP1Q5U651 963 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms