RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SFPQP23246 707 aaKnown RBP eCLIP19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 GATMP50440 423 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 ERVK-21P61565 698 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 FAM189BP81408 668 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 ZRSR1Q15695 479 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 CATSPER4Q7RTX7 472 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 POLR3FQ9H1D9 316 aaPredicted RBP19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 BHMT2Q9H2M3 363 aa19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 RC3H2Q9HBD1 1191 aaKnown RBP19.97■□□□□ 0.79
SNRPA1-201ENST00000254193 E9PMD0 336 aa19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 GLRA2P23416 452 aa19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 BTG3Q14201 252 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 MXD4Q14582 209 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 FAM102BQ5T8I3 360 aa19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 FIBCD1Q8N539 461 aa19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 MAFAQ8NHW3 353 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 ZNF689Q96CS4 500 aaPredicted RBP19.96■□□□□ 0.79
SNRPA1-201ENST00000254193 CYP11B2P19099 503 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 PHKA2P46019 1235 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 CEBPZQ03701 1054 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 GRIN1Q05586 938 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 CAPSQ13938 189 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 FOXD4L5Q5VV16 416 aaPredicted RBP19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 KCNK18Q7Z418 384 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 SRGAP1Q7Z6B7 1085 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 MCPH1Q8NEM0 835 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 FOXD4L4Q8WXT5 416 aaPredicted RBP19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 PLIN2Q99541 437 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 POLD4Q9HCU8 107 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 DNM3Q9UQ16 869 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 PIN4Q9Y237 131 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 ADGRA3Q8IWK6 1321 aa19.95■□□□□ 0.78
SNRPA1-201ENST00000254193 PTENP60484 403 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 GRB10Q13322 594 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 TFDP1Q14186 410 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 PTPAQ15257 358 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 RNF169Q8NCN4 708 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 GDPD5Q8WTR4 605 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 PNMA5Q96PV4 448 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 ZSCAN16Q9H4T2 348 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 CHST12Q9NRB3 414 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 TMEM161AQ9NX61 479 aa19.94■□□□□ 0.78
SNRPA1-201ENST00000254193 CHD9Q3L8U1 2897 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 MICAL3Q7RTP6 2002 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 EVPLQ92817 2033 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 LPXNO60711 386 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 EYA4O95677 639 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 FGFR1P11362 822 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 MARCKSP29966 332 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 EPC2Q52LR7 807 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 ECHDC2Q86YB7 292 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 TMEM192Q8IY95 271 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 CMTR2Q8IYT2 770 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 FBXO22Q8NEZ5 403 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 ELAC1Q9H777 363 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 DACT1Q9NYF0 836 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 MRPL42Q9Y6G3 142 aaKnown RBP19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 PTPRSQ13332 1948 aa19.93■□□□□ 0.78
SNRPA1-201ENST00000254193 A0A0U1RQF3 1178 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 TBKBP1A7MCY6 615 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 LINC00271P0C7V0 271 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 HOXA11P31270 313 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 POU5F1BQ06416 359 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 HYIQ5T013 277 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 TWF2Q6IBS0 349 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 CABP7Q86V35 215 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 PPM1EQ8WY54 764 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 BSNDQ8WZ55 320 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 CDK5RAP3Q96JB5 506 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 AK8Q96MA6 479 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 USP28Q96RU2 1077 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 AGPAT5Q9NUQ2 364 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 RNF216Q9NWF9 866 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 WDR81Q562E7 1941 aa19.92■□□□□ 0.78
SNRPA1-201ENST00000254193 LRRIQ4A6NIV6 560 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 INO80B-WBP1J3KQ70 363 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 LONP1P36776 959 aaKnown RBP19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 UBA7P41226 1012 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 MBTD1Q05BQ5 628 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 CCDC85BQ15834 202 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 IFNLR1Q8IU57 520 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 MICALL1Q8N3F8 863 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 SAMD11Q96NU1 681 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 RUSC1Q9BVN2 902 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 RNF19AQ9NV58 838 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 MTCH2Q9Y6C9 303 aa19.91■□□□□ 0.78
SNRPA1-201ENST00000254193 GTPBP6O43824 516 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 TSPAN1O60635 241 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 ERLIN2O94905 339 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 SSBP05455 408 aaKnown RBP eCLIP19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 ATF7P17544 494 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 CTNNB1P35222 781 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 BMPR1AP36894 532 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 PKP1Q13835 747 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 LONRF3Q496Y0 759 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 TMEM119Q4V9L6 283 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 SPECC1Q5M775 1068 aa19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 ZNF598Q86UK7 904 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-201ENST00000254193 CLP1Q92989 425 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms