RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 DNAJC12Q9UKB3 198 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 PPP2R3BQ9Y5P8 575 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 F8VZ95 297 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 MAFGO15525 162 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 GFPT2O94808 682 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 KRT13P13646 458 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 SOX5P35711 763 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 NPEPPSP55786 919 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 SMC1AQ14683 1233 aaKnown RBP27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 NOL9Q5SY16 702 aaKnown RBP27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 VPS36Q86VN1 386 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 NLGN2Q8NFZ4 835 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 NSUN6Q8TEA1 469 aaKnown RBP27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 PCIF1Q9H4Z3 704 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 SUGCTQ9HAC7 445 aa27.44■■□□□ 1.98
TMEM55B-201ENST00000250489 PEX3P56589 373 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 DMTNQ08495 405 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 INTS8Q75QN2 995 aaKnown RBP27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 SPATA4Q8NEY3 305 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 CBWD1Q9BRT8 395 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 TEX13BQ9BXU2 312 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 TMOD4Q9NZQ9 345 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 DAAM1Q9Y4D1 1078 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 PCDHA10Q9Y5I2 948 aa27.43■■□□□ 1.98
TMEM55B-201ENST00000250489 GRID2IPA4D2P6 1211 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 MEI1Q5TIA1 1274 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 ANO5Q75V66 913 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 TRMT1LQ7Z2T5 733 aaKnown RBP27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 APEX2Q9UBZ4 518 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 SLC16A4O15374 487 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 EVI5O60447 810 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 RGS20O76081 388 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 FTCDO95954 541 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 KCNA2P16389 499 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 HIRAP54198 1017 aaPredicted RBP27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 DRAP1Q14919 205 aaPredicted RBP27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 FAM102BQ5T8I3 360 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 CCDC181Q5TID7 509 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 MSL3Q8N5Y2 521 aaKnown RBP27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 GPR88Q9GZN0 384 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 ACAD9Q9H845 621 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 CYP39A1Q9NYL5 469 aa27.42■■□□□ 1.98
TMEM55B-201ENST00000250489 DDX3XO00571 662 aaKnown RBP eCLIP27.41■■□□□ 1.982e-8■■□□□ 14.3
TMEM55B-201ENST00000250489 SNRPFP62306 86 aaKnown RBP27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 TERF2Q15554 542 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 SLC17A8Q8NDX2 589 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 OLIG1Q8TAK6 271 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 LMO3Q8TAP4 145 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 IWS1Q96ST2 819 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 A1CFQ9NQ94 594 aaKnown RBP27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 SMARCAL1Q9NZC9 954 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 HSPBP1Q9NZL4 362 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 EHD2Q9NZN4 543 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 AFG3L2Q9Y4W6 797 aa27.41■■□□□ 1.98
TMEM55B-201ENST00000250489 PAFAH1B1P43034 410 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 VAMP7P51809 220 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 DLG4P78352 724 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 XXYLT1Q8NBI6 393 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 OAS2P29728 719 aaKnown RBP27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 GPC2Q8N158 579 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 GABBR1Q9UBS5 961 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 RNF14Q9UBS8 474 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 EMSYQ7Z589 1322 aa27.4■■□□□ 1.98
TMEM55B-201ENST00000250489 SPDYE16A6NNV3 312 aaPredicted RBP27.39■■□□□ 1.98
TMEM55B-201ENST00000250489 MAPK13O15264 365 aa27.39■■□□□ 1.98
TMEM55B-201ENST00000250489 CASP8Q14790 479 aa27.39■■□□□ 1.98
TMEM55B-201ENST00000250489 CCDC70Q6NSX1 233 aa27.39■■□□□ 1.98
TMEM55B-201ENST00000250489 MYPNQ86TC9 1320 aa27.39■■□□□ 1.98
TMEM55B-201ENST00000250489 KIAA1217Q5T5P2 1943 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 ZNF862O60290 1169 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 RFX1P22670 979 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 DNAAF5Q86Y56 855 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.39■■□□□ 1.971e-8■■■■■ 51.1
TMEM55B-201ENST00000250489 SLC30A5Q8TAD4 765 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 LNX1Q8TBB1 728 aaPredicted RBP27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 HOXC10Q9NYD6 342 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 INTUQ9ULD6 942 aa27.39■■□□□ 1.97
TMEM55B-201ENST00000250489 WDR90Q96KV7 1748 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 NFASCO94856 1347 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 N4BP1O75113 896 aaKnown RBP27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 STBD1O95210 358 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 H2AFZP0C0S5 128 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 PPP3CAQ08209 521 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 IFI16Q16666 785 aaKnown RBP27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 SUPT20HL1Q3ZLR7 823 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 CFAP221Q4G0U5 840 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 C1orf220Q5T0J3 134 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 PHLDB3Q6NSJ2 640 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 H2AFVQ71UI9 128 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 OTUD6AQ7L8S5 288 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 FMNL3Q8IVF7 1028 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 TMEM161BQ8NDZ6 487 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 ZSWIM2Q8NEG5 633 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 ATP6V0A1Q93050 837 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 SYT11Q9BT88 431 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 MAF1Q9H063 256 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 WDR81Q562E7 1941 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 LOC285556D6RIA3 1793 aa27.38■■□□□ 1.97
TMEM55B-201ENST00000250489 P4HA2O15460 535 aa27.37■■□□□ 1.97
TMEM55B-201ENST00000250489 MAP9Q49MG5 647 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms