RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 MED24O75448 989 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 CHRNA1P02708 482 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 KCNQ1P51787 676 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 CLCN3P51790 818 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 NPEPPSP55786 919 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 MGAT3Q09327 533 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 MXD4Q14582 209 aaPredicted RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 GPNMBQ14956 572 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 SLC39A14Q15043 492 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 PLEKHG4Q58EX7 1191 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 PLA2G4FQ68DD2 849 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 TSHZ1Q6ZSZ6 1077 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 LRRC71Q8N4P6 559 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 MCPH1Q8NEM0 835 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 PHOSPHO2Q8TCD6 241 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 PSPC1Q8WXF1 523 aaKnown RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 UHRF1Q96T88 793 aaPredicted RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 MTRQ99707 1265 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 FTHL17Q9BXU8 183 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 IFIH1Q9BYX4 1025 aaKnown RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 DHX33Q9H6R0 707 aaKnown RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 SUCLA2Q9P2R7 463 aaPredicted RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 WRAP73Q9P2S5 460 aaPredicted RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 KIAA1024Q9UPX6 916 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 GINS2Q9Y248 185 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 SRPRBQ9Y5M8 271 aaKnown RBP12.55□□□□□ -0.4
SF3B6-201ENST00000233468 CLIC4Q9Y696 253 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 BRWD1Q9NSI6 2320 aa12.55□□□□□ -0.4
SF3B6-201ENST00000233468 GPR182O15218 404 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 YEATS4O95619 227 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 BRD1O95696 1058 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 BMP1P13497 986 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 RARRES1P49788 294 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 NLRP11P59045 1033 aaKnown RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 TAP1Q03518 808 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 CEBPZQ03701 1054 aaKnown RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 PAK2Q13177 524 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 TFDP1Q14186 410 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 EMC2Q15006 297 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 ZRSR1Q15695 479 aaKnown RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 IL17AQ16552 155 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 TCTN1Q2MV58 587 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 FBXO47Q5MNV8 452 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 CABP7Q86V35 215 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 LINC01465Q8N7H1 131 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 DBF4BQ8NFT6 615 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 KCNG4Q8TDN1 519 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 PIGOQ8TEQ8 1089 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 FOXD4L4Q8WXT5 416 aaPredicted RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 ZBTB10Q96DT7 871 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 USP28Q96RU2 1077 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 DDX19AQ9NUU7 478 aaKnown RBP12.54□□□□□ -0.4
SF3B6-201ENST00000233468 CCDC39Q9UFE4 941 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 MTCH2Q9Y6C9 303 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
SF3B6-201ENST00000233468 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 SPTLC2O15270 562 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 PPP6R2O75170 966 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 AMHP03971 560 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 VTNP04004 478 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 GHRP10912 638 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 MARCKSP29966 332 aaPredicted RBP12.53□□□□□ -0.4
SF3B6-201ENST00000233468 MBTPS1Q14703 1052 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 PTPAQ15257 358 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 HYIQ5T013 277 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 RHPN2Q8IUC4 686 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 ARNTL2Q8WYA1 636 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 CEP89Q96ST8 783 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 KCNG1Q9UIX4 513 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 COL4A3BPQ9Y5P4 624 aa12.53□□□□□ -0.4
SF3B6-201ENST00000233468 LCHNA4D1U4 455 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 ZBTB39O15060 712 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 GPR32O75388 356 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 EYA4O95677 639 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 SFPQP23246 707 aaKnown RBP eCLIP12.52□□□□□ -0.41
SF3B6-201ENST00000233468 EIF4BP23588 611 aaKnown RBP12.52□□□□□ -0.41
SF3B6-201ENST00000233468 GPC3P51654 580 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 EMP3P54852 163 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 KRT85P78386 507 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
SF3B6-201ENST00000233468 LPIN1Q14693 890 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
SF3B6-201ENST00000233468 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
SF3B6-201ENST00000233468 KIZQ2M2Z5 673 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 HERC6Q8IVU3 1022 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
SF3B6-201ENST00000233468 PRPF31Q8WWY3 499 aaKnown RBP12.52□□□□□ -0.41
SF3B6-201ENST00000233468 OSMRQ99650 979 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms