RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 FAM213AQ9BRX8 229 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 NEO1Q92859 1461 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 GYG2O15488 501 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 KRT38O76015 456 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 KITP10721 976 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PHKA2P46019 1235 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TFDP2Q14188 446 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PADI6Q6TGC4 694 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 TMEM270Q6UE05 265 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 RMDN3Q96TC7 470 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 HPCAL4Q9UM19 191 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 POLIQ9UNA4 740 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 ARAP3Q8WWN8 1544 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 RXRBP28702 533 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PRCPP42785 496 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 COPS2P61201 443 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 DEUP1Q05D60 604 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 COASYQ13057 564 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 KLHL38Q2WGJ6 581 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 SARM1Q6SZW1 724 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 PIGBQ92521 554 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 MASTLQ96GX5 879 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 MXD3Q9BW11 206 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 EDEM3Q9BZQ6 932 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
LAMA4-201ENST00000230538 LAMC1P11047 1609 aa12.33□□□□□ -0.44
LAMA4-201ENST00000230538 NCK2O43639 380 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 CAV1Q03135 178 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 CAPRIN1Q14444 709 aaKnown RBP12.32□□□□□ -0.44
LAMA4-201ENST00000230538 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 TOPORSQ9NS56 1045 aaPredicted RBP12.32□□□□□ -0.44
LAMA4-201ENST00000230538 MOSPD1Q9UJG1 213 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 HUS1O60921 280 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 HADHAP40939 763 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
LAMA4-201ENST00000230538 DYDC2Q96IM9 177 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 SLC16A4O15374 487 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 CREB3O43889 395 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 ANP32DO95626 131 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 IFNA8P32881 189 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 ZNF772Q68DY9 489 aaPredicted RBP12.32□□□□□ -0.44
LAMA4-201ENST00000230538 PDCD6IPQ8WUM4 868 aaKnown RBP12.32□□□□□ -0.44
LAMA4-201ENST00000230538 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 KIFC3Q9BVG8 833 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 NUP85Q9BW27 656 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 TMEM260Q9NX78 707 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 MCF2P10911 925 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 RECQLP46063 649 aaPredicted RBP12.32□□□□□ -0.44
LAMA4-201ENST00000230538 CACNB3P54284 484 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 IMPG1Q17R60 797 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 C1orf228Q6PIY5 440 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 VPS11Q9H270 941 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 ZFP69BQ9UJL9 534 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 TSPY1Q01534 308 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 HLFQ16534 295 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 SCN4BQ8IWT1 228 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 BEST2Q8NFU1 509 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
LAMA4-201ENST00000230538 CCDC195A0A1B0GUA6 201 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 E2F6O75461 281 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
LAMA4-201ENST00000230538 NR1H3Q13133 447 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 RASSF3Q86WH2 238 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 ELMOD1Q8N336 334 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 N4BP2L2Q92802 583 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-201ENST00000230538 E9PMD0 336 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 PDCLQ13371 301 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 LRRC31Q6UY01 552 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-201ENST00000230538 BPIFA3Q9BQP9 254 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TRPV6Q9H1D0 765 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 M0QYV0 167 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 PMS2P54278 862 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TTLL6Q8N841 843 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 FAM96AQ9H5X1 160 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 NPHP4O75161 1426 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-201ENST00000230538 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 ZNF302Q9NR11 478 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 H7C1W4 665 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 VAMP7P51809 220 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 FAM47EQ6ZV65 393 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 TTC30BQ8N4P2 665 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 GCOM2Q9BZD3 368 aaPredicted RBP12.31□□□□□ -0.44
LAMA4-201ENST00000230538 HOXC10Q9NYD6 342 aa12.31□□□□□ -0.44
LAMA4-201ENST00000230538 ERBB3P21860 1342 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms