RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 MAGEF1Q9HAY2 307 aa15.52■□□□□ 0.08
SPTLC2-201ENST00000216484 SH3TC1Q8TE82 1336 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 ABCC1P33527 1531 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 HNRNPRO43390 633 aaKnown RBP15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 PSMC6P62333 389 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 SYNGAP1Q96PV0 1343 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 USP17L12C9JPN9 530 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 USP17L21D6R901 530 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 RNF103O00237 685 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 CDH2P19022 906 aaPredicted RBP15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 CEP170P1Q96L14 293 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 C10orf88Q9H8K7 445 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 CYP26B1Q9NR63 512 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 ANAPC7Q9UJX3 599 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 CTIFO43310 598 aaKnown RBP15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 GYS2P54840 703 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 CUL3Q13618 768 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 HIC1Q14526 733 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 DPY19L2Q6NUT2 758 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 APOA5Q6Q788 366 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 FBXO18Q8NFZ0 1043 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 STAMBPL1Q96FJ0 436 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 TMEM206Q9H813 350 aa15.52■□□□□ 0.07
SPTLC2-201ENST00000216484 M0R3G1 203 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 LRRC41Q15345 812 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 TEX2Q8IWB9 1127 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 PRPF18Q99633 342 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 ZBED2Q9BTP6 218 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 SPRTNQ9H040 489 aaPredicted RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 HSPBP1Q9NZL4 362 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 CACNA1FO60840 1977 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 POTEFA5A3E0 1075 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 UBAP1LF5GYI3 381 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 SGSM2O43147 1006 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 PWP1Q13610 501 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 MAN2A1Q16706 1144 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 PARP10Q53GL7 1025 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 COBLL1Q53SF7 1204 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 GCOM2Q9BZD3 368 aaPredicted RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 RNF14Q9UBS8 474 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 EIF4G3O43432 1585 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 STXBP3O00186 592 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 NOS1P29475 1434 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 SCNN1DP51172 638 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 TAS2R42Q7RTR8 314 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 DYRK4Q9NR20 520 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 ZBTB40Q9NUA8 1239 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 DTNAQ9Y4J8 743 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 SP110Q9HB58 689 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 EXOSC4Q9NPD3 245 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 CMA1P23946 247 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 TRIM25Q14258 630 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 OR6P1Q8NGX9 317 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 SPATA2Q9UM82 520 aa15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 ENO1P06733 434 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 NARS2Q96I59 477 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-201ENST00000216484 WDR17Q8IZU2 1322 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 HMGB3O15347 200 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 SOX11P35716 441 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 PSMD2Q13200 908 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 KRT24Q2M2I5 525 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 DHTKD1Q96HY7 919 aaPredicted RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 RERGLQ9H628 205 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 ETNK1Q9HBU6 452 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 BLOC1S6Q9UL45 172 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 MYO1CO00159 1063 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 OR6B3Q8NGW1 331 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 C19orf60Q96EN9 201 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 C16orf96A6NNT2 1141 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 GPS1Q13098 491 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 C11orf88Q6PI97 169 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 SARM1Q6SZW1 724 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 LRRC31Q6UY01 552 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 MYH7P12883 1935 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 SOX6P35712 828 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 KDSRQ06136 332 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 KRT84Q9NSB2 600 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 HAUS5O94927 633 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 ICA1Q05084 483 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 SLC10A5Q5PT55 438 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 STK32BQ9NY57 414 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 GMNCA6NCL1 334 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 TEX28O15482 410 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 TLR2O60603 784 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 EIF4A3P38919 411 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 HEATR4Q86WZ0 1026 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 EME1Q96AY2 570 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 DTNBP1Q96EV8 351 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 CDK13Q14004 1512 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 HMOX2P30519 316 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 CLCN6P51797 869 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 SCN4BQ8IWT1 228 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms