RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Ccdc68Q8BVC4 333 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Tldc1Q8K0P3 455 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Dach2Q925Q8 634 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rmdn1Q9DCV4 305 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rtn3Q9ES97 964 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Arl6ip4Q9JM93 229 aa12.48□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Arhgap4B1AUY3 965 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Tmem132bF7BAB2 1078 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 CenpaO35216 134 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Zc3h18Q0P678 948 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Micall2Q3TN34 1009 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Q3UJP5 209 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Foxd1Q61345 456 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 SugctQ7TNE1 436 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 ChiaQ91XA9 473 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Catsper1Q91ZR5 686 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Xpo6Q924Z6 1125 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Igf2bp3Q9CPN8 579 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Snx10Q9CWT3 201 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ttc33Q9D6K7 262 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Stk32bQ9JJX8 414 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Acot3Q9QYR7 432 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 PapolbQ9WVP6 641 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Carmil3Q3UFQ8 1375 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Lamc1P02468 1607 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 EsrraO08580 422 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Eno3P21550 434 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ccdc138Q0VF22 680 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gm14685Q52KH6 695 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Srrm1Q52KI8 946 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Sh3tc2Q80VA5 1289 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Adamts2Q8C9W3 1213 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 HibchQ8QZS1 385 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nme5Q99MH5 211 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Fam173bQ9D1Z3 247 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Krt10P02535 570 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rasa3Q60790 834 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Scaf8Q6DID3 1268 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Glis3Q6XP49 780 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Asnsd1Q8BFS9 627 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rccd1Q8BTU7 377 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 LRWD1Q8BUI3 648 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Drc3Q9D5E4 523 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ybx3Q9JKB3 361 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Serpinb6cW4VSP4 379 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Cyp2d34L7N463 504 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 RargP18911 458 aaKnown RBP12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ext2P70428 718 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 E330034G19RikQ3UWX6 351 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Arhgap10Q6Y5D8 786 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ttc7aQ8BGB2 858 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ppm1mQ8BU27 406 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Trim60Q8VI40 466 aa12.47□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Cul4bA2A432 970 aaKnown RBP12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Mmrn2A6H6E2 943 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Trim75Q3UWZ0 467 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rhox12Q4TU81 186 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Rc3h1Q4VGL6 1130 aaKnown RBP12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ankrd6Q69ZU8 712 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Nme8Q715T0 586 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Vipas39Q8BGQ1 491 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 OscarQ8VBT3 265 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Trim16Q99PP9 556 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Klra10Q9R1G6 266 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 CemipQ8BI06 1361 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Gm5689F6Y2A6 97 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 IkbkbO88351 757 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Tmem120bQ3TA38 339 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Mylk3Q3UIZ8 795 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Pop1Q8K205 1045 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Basp1Q91XV3 226 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Pcdha5Q91Y15 934 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Ccdc130Q9D516 385 aa12.46□□□□□ -0.41
Ndc1-204ENSMUST00000139560 Psmd14O35593 310 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 NyxP83503 476 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 EgfrQ01279 1210 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Psen2Q61144 448 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Eps8l1Q8R5F8 716 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tti1Q91V83 1085 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Msantd4Q91YU3 345 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Wars2Q9CYK1 360 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 MrrfQ9D6S7 262 aaKnown RBP12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sapcd2Q9D818 391 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Fthl17aQ9DAX0 182 aa12.46□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm379J3QQ19 296 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Casp12O08736 419 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 D1Pas1P16381 660 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 YwhaeP62259 255 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Col6a1Q04857 1025 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ccdc85aQ5SP85 500 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Sin3bQ62141 1098 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 PnocQ64387 187 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 TbataQ7TSD4 393 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Spata21Q8BHW6 681 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Arfip2Q8K221 341 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Txndc5Q91W90 417 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ndufv1Q91YT0 464 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Abcg8Q9DBM0 673 aa12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Rpf2Q9JJ80 306 aaKnown RBP12.45□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Atp7bQ64446 1462 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms