RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Mmp20P57748 482 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Atp2a3Q64518 1038 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Amigo3Q8C2S7 508 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Stap2Q8R0L1 411 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Ankrd49Q8VE42 238 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Dtnbp1Q91WZ8 352 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Plagl2Q925T4 496 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Mtfr1lQ9CWE0 289 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Ccdc182Q9D9C6 152 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Stk11Q9WTK7 436 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 S100a5P63084 93 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Adamts18Q4VC17 1219 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Bud13Q8R149 637 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Spdl1Q923A2 608 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Sgk1Q9WVC6 431 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 PhbP67778 272 aaKnown RBP16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Gm5622Q810Q0 167 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 PolrmtQ8BKF1 1207 aaKnown RBP16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Lrrc8cQ8R502 803 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Mmtag2Q99LX5 260 aaKnown RBP16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Psma8Q9CWH6 250 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Llcfc1Q9D9P8 108 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Gap43P06837 227 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Hace1Q3U0D9 909 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Trim80Q3V061 624 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Arhgap18Q8K0Q5 663 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Stard7Q8R1R3 373 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 CtsqQ91ZF4 343 aa16.65■□□□□ 0.26
Ccdc88b-201ENSMUST00000113440 Lrrc38A2VDH3 298 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 CnpP16330 420 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ccdc84Q4VA36 332 aaKnown RBP16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Btbd7Q8CFE5 1130 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gimap4Q99JY3 219 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cnot8Q9D8X5 292 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gadd45gQ9Z111 159 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Wnt7aP24383 349 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cap1P40124 474 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Lrch2Q3UMG5 773 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 EregQ61521 162 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cmtr1Q9DBC3 837 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gipc1Q9Z0G0 333 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Lmnb1P14733 588 aaKnown RBP16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mysm1Q69Z66 819 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Fbxo10Q7TQF2 950 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 MtrrQ8C1A3 696 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 YwhabQ9CQV8 246 aaKnown RBP16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Aldh1b1Q9CZS1 519 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rfpl4bJ3QPR6 266 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Lrrc1Q80VQ1 524 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Pnma1Q8C1C8 353 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mphosph6Q9D1Q1 161 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Drc3Q9D5E4 523 aa16.64■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gm7995L7N2E4 160 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cyfip1Q7TMB8 1253 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mrps22Q9CXW2 359 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 N4bp2F8VQG7 1678 aaKnown RBP16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 HscbQ8K3A0 234 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cyp2s1Q9DBX6 501 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 HnrnpcQ9Z204 313 aaKnown RBP16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 D630036H23RikQ3UQD6 204 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tmed1Q3V009 227 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Phf20Q8BLG0 1010 aaKnown RBP16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 E2f4Q8R0K9 410 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Polr3fQ921X6 316 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Abcb5B5X0E4 1255 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rpf1Q7TND5 349 aaKnown RBP16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mageb16Q9CWV4 363 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tnfrsf10bQ9QZM4 381 aa16.63■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Got1P05201 413 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 MgarpQ8VI64 283 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tmod3Q9JHJ0 352 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Adam22Q9R1V6 904 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 SynrgQ5SV85 1306 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gm10436L7N1Y3 520 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rab20P35295 233 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Zmym1Q3TJB1 983 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 OcrlQ6NVF0 900 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Bank1Q80VH0 783 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Dars2Q8BIP0 653 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Sept11Q8C1B7 431 aaKnown RBP16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Sox30Q8CGW4 782 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Fam20aQ8CID3 541 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ces4aQ8R0W5 563 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Serpina1aP07758 413 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Serpina1bP22599 413 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Serpina1cQ00896 412 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Serpina1dQ00897 413 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Fam198bQ3UPI1 517 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Snip1Q8BIZ6 383 aaKnown RBP16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Spats2lQ91WJ7 558 aaKnown RBP16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rnaseh2aQ9CWY8 301 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cyth1Q9QX11 398 aa16.62■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gm6588E9Q3K0 461 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Palb2Q3U0P1 1104 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Otud5Q3U2S4 566 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Plekhg6Q8R0J1 787 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ophn1Q99J31 802 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tsc1Q9EP53 1161 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ecel1Q9JMI0 775 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Diaph3Q9Z207 1171 aa16.61■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms