RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Zswim7Q9CWQ2 152 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Usp54Q8BL06 1588 aaKnown RBP16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ppp3ccP48455 513 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 RenbpP82343 430 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Rab3ipQ68EF0 428 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Zfp341Q6PGC9 846 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Cpa5Q8R4H4 436 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Mis18aQ9CZJ6 204 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Fam84aQ9D650 292 aa16.63■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Plekhg4A0A1L1SU27 1217 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Iqca1lA6H690 825 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Krt1P04104 637 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Grin1P35438 938 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Wfs1P56695 890 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Frmd8Q3UFK8 466 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Srp68Q8BMA6 625 aaKnown RBP16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Trip10Q8CJ53 603 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 FtcdQ91XD4 541 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Sash1P59808 1230 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Hif1aQ61221 836 aaKnown RBP16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Spata32Q8C5V0 334 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ipo11Q8K2V6 975 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Snx5Q9D8U8 404 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Magi3Q9EQJ9 1476 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Apol11bE9PUZ0 337 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Gm20721E9Q2U8 318 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ppp1r13lQ5I1X5 824 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Slc25a24Q8BMD8 475 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ccdc90bQ8C3X2 256 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Agr3Q8R3W7 165 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 CalcbQ99MP3 130 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ndc80Q9D0F1 642 aaKnown RBP16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Pard6bQ9JK83 371 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ubxn8Q9QZ49 277 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Stag2O35638 1231 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 ItgaeQ60677 1167 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Pacsin1Q61644 441 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Armc6Q8BNU0 468 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ccdc103Q9D9P2 237 aa16.62■□□□□ 0.25
Ubr2-201ENSMUST00000113335 D1Pas1P16381 660 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Impdh2P24547 514 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Usp10P52479 792 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Fam49aQ8BHZ0 323 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Scfd1Q8BRF7 639 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 TnrQ8BYI9 1358 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Paip2bQ91W45 136 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Psmd9Q9CR00 222 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Sertad1Q9JL10 236 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Slc2a13Q3UHK1 637 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ece1Q4PZA2 769 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Senp6Q6P7W0 1132 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Dcaf15Q6PFH3 600 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Akap7Q7TN79 314 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Slc2a5Q9WV38 501 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Kif1bQ60575 1816 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Dthd1E9PZX1 795 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Sema4dO09126 861 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 KitP05532 979 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 ScocQ78YZ6 125 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Smyd3Q9CWR2 428 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Nr1i3O35627 358 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Gm136Q3V037 328 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ino80dQ66JY2 873 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Smg5Q6ZPY2 1017 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Tdrd7Q8K1H1 1086 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Micu3Q9CTY5 523 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Map3k4O08648 1597 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Pabpc1lA2A5N3 607 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Nlrp4eQ66X19 978 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Trim65Q8BFW4 522 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Nlrp4aQ8BU40 982 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Kiaa0391Q8JZY4 584 aaKnown RBP16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ces1dQ8VCT4 565 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Abtb1Q99LJ2 478 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Nsmce3Q9CPR8 279 aa16.61■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Gm3182K7N6T8 263 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Chil3O35744 398 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 LmnaP48678 665 aaKnown RBP16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Akap4Q60662 849 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Krt31Q61765 416 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 FscbA1EGX6 1074 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Psmc1P62192 440 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Pid1Q3UBG2 217 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Olfr1415Q7TQS4 311 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 BC048507Q80ZS7 89 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Olfr1416Q8VGU4 312 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Rfc4Q99J62 364 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 NptxrQ99J85 493 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 St13Q99L47 371 aaKnown RBP16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Ppp1r2Q9DCL8 206 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Osbpl9A2A8Z1 736 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Supt3B0QZW4 406 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Man1a2P39098 641 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Nedd4P46935 887 aaKnown RBP16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Chp1P61022 195 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 GmncQ3URY2 333 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Apobec2Q9WV35 224 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Slc35g2D3YVE8 412 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Kcna1P16388 495 aa16.6■□□□□ 0.25
Ubr2-201ENSMUST00000113335 Lsg1Q3UM18 644 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 58.2 ms