RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 PrameQ9D4Z5 464 aa10.87□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Alg13Q9D8C3 1166 aaKnown RBP10.87□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Lama3Q61789 3330 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 SprtnG3X912 497 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Ap1b1O35643 943 aaKnown RBP10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Nck2O55033 380 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 GpiP06745 558 aaKnown RBP10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 DmpkP54265 631 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Znf354cQ571J5 560 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Zkscan4Q5SZT6 480 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Mkrn3Q60764 544 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Mns1Q61884 491 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 IqceQ6PCQ0 778 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Vps52Q8C754 723 aaKnown RBP10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Phtf2Q8CB19 747 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Copb1Q9JIF7 953 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Tnfsf13bQ9WU72 309 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gon4lQ9DB00 2260 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Rnf19aP50636 840 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 PrkcbP68404 671 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Asap3Q5U464 904 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 AlcamQ61490 583 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 EregQ61521 162 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Cyp3a11Q64459 504 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gemin4Q6P6L6 1058 aaKnown RBP10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Chtf18Q8BIW9 969 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Slc15a5Q8CBB2 566 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Grin3bQ91ZU9 1003 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Polr3eQ9CZT4 710 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Xrn2Q9DBR1 951 aaKnown RBP10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 B4galt5Q9JMK0 388 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Scgb2b18A0A087WPA9 112 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Pate3B3GLJ3 98 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Zfp781Q0P5U5 243 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Pnpla5Q32LZ8 432 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Nom1Q3UFM5 854 aaKnown RBP10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Mief2Q5NCS9 454 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Six6os1Q9CTN5 574 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Ubxn11Q9D572 484 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 March8Q9DBD2 286 aa10.86□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Mmrn2A6H6E2 943 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Magea4F2Z493 315 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gm21973F6WEZ7 68 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Eif3dO70194 548 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Slc6a20bO88575 635 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 IppP28575 584 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Pstpip1P97814 415 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Acot6Q32Q92 419 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Tcaf1Q8BNE1 924 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 AsphQ8BSY0 741 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Tmem206Q9D771 350 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Olig1Q9JKN5 260 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Odf2A3KGV1 830 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Cavin1O54724 392 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Btg4O70552 250 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gna14P30677 355 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Snx27Q3UHD6 539 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Snx25Q3ZT31 840 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Oog4Q4G0C7 502 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Smarca1Q6PGB8 1046 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Slc38a7Q8BWH0 463 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Fam126bQ8C729 530 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 AclyQ91V92 1091 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Csde1Q91W50 798 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gnl2Q99LH1 728 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Hspbp1Q99P31 357 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Q9CYI0 393 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Ttll10A4Q9F3 704 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 PotegA5H0M4 473 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gm6133B2RY53 190 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Prl6a1O35257 230 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Tnfrsf11aO35305 625 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gtf2bP62915 316 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Mark3Q03141 753 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 PoliQ6R3M4 717 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Ano5Q75UR0 904 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Arid5bQ8BM75 1188 aaKnown RBP10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 DcpsQ9DAR7 338 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Pold3Q9EQ28 462 aa10.85□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gm1993A6X8I0 212 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 SlxD3Z347 212 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 E030030I06RikJ3QML9 246 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Cyth3O08967 399 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Sema4dO09126 861 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Icam5Q60625 917 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Crhr2Q60748 411 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Tcf12Q61286 706 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 PodnQ7TQ62 611 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 4933409G03RikQ8C5U0 320 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Gm8298J3QPI0 401 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Chrna1P04756 457 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Sox5P35710 763 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Rasal3Q8C2K5 1041 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Tmem161bQ8C2L6 487 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Mtmr14Q8VEL2 648 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Wfdc1Q9ESH5 211 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Asah2Q9JHE3 756 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Itga2bQ9QUM0 1033 aa10.84□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Pip4k2aO70172 405 aa10.83□□□□□ -0.67
Ccdc38-201ENSMUST00000092215 Wnt7bP28047 349 aa10.83□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms