RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 PtgdrP70263 357 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ifnl2Q4VK74 193 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Sarm1Q6PDS3 724 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Q8C5C9 218 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 P3h2Q8CG71 703 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 FtcdQ91XD4 541 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 AatkQ80YE4 1365 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Prss51A0A286YDY8 319 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Klhl41A2AUC9 606 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Nrg3O35181 713 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Tdrd7Q8K1H1 1086 aaKnown RBP13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 GatbQ99JT1 557 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cbx8Q9QXV1 362 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Kifc3O35231 824 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Casp4P70343 373 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Gjb6P70689 261 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Runx2Q08775 607 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Krt72Q6IME9 520 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Szrd1Q6NXN1 152 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Nol6Q8R5K4 1152 aaKnown RBP13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Anapc4Q91W96 807 aa13.17□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Rgs10Q9CQE5 181 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ccdc80Q8R2G6 949 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Gid8Q9D7M1 228 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Dkc1Q9ESX5 509 aaKnown RBP13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cul3Q9JLV5 768 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Peg12Q9WVA7 283 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Deaf1Q9Z1T5 566 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Sik3Q6P4S6 1311 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 PxdnQ3UQ28 1475 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cdc27A2A6Q5 825 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ccdc144bE9PVZ3 520 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Gm7942L7N277 499 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Atxn10P28658 475 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 S100gP97816 79 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Nr1h4Q60641 488 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Usp17leQ7M764 540 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Arl8aQ8VEH3 186 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cnpy3Q9DAU1 276 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ehd4Q9EQP2 541 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Abcb5B5X0E4 1255 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Gnl1P36916 607 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Lig1P37913 916 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 SftpbP50405 377 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Map2k2Q63932 401 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Phf21aQ6ZPK0 659 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Sept10Q8C650 452 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Fbxo18Q8K2I9 1042 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Tasp1Q8R1G1 420 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Tnip2Q99JG7 430 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Abcc3B2RX12 1523 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Carmil3Q3UFQ8 1375 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Sash1P59808 1230 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Kctd1Q5M956 257 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Homer3Q99JP6 356 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Hsph1Q61699 858 aaKnown RBP13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Papd5Q68ED3 633 aaKnown RBP13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Taf11Q99JX1 211 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cct7P80313 544 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Xxylt1Q3U4G3 392 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Kirrel3Q8BR86 778 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Serpina1eQ00898 413 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Lrrc41Q8K1C9 807 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cnot8Q9D8X5 292 aa13.16□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Col1a2Q01149 1372 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Map7d3A2AEY4 876 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Adssl1P28650 457 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 RasefQ5RI75 627 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 CtcfQ61164 736 aaKnown RBP13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Rundc3bQ6PDC0 408 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Swi5Q8K3D3 89 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Tmed10Q9D1D4 219 aaKnown RBP13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Timm50Q9D880 353 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Fthl17aQ9DAX0 182 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Gm4871D3Z0W7 314 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Trim15G3UY57 292 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 C87499Q3UX49 493 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Hspa1aQ61696 641 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Plekha4Q8VC98 588 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Anapc7Q9WVM3 565 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Zbtb12Q9Z150 459 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Myh14Q6URW6 2000 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Cdk12Q14AX6 1484 aaKnown RBP13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Lrrc63A6H694 637 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Kpnb1P70168 876 aaKnown RBP13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ext2P70428 718 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Rhot1Q8BG51 631 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 PycardQ9EPB4 193 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ptch1Q61115 1434 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Erbb3Q61526 1339 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Kcna1P16388 495 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Lrig2Q52KR2 1054 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Sin3bQ62141 1098 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Avpr1aQ62463 423 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ccdc85bQ6PDY0 202 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Foxp4Q9DBY0 795 aaKnown RBP13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Tmod3Q9JHJ0 352 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Plod1Q9R0E2 728 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Ccdc85cE9Q6B2 420 aa13.15□□□□□ -0.3
Vcpip1-201ENSMUST00000057438 Gm7535F7CXE4 302 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms