RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 PorcnQ9JJJ7 461 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Akt3Q9WUA6 479 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Clk2O35491 499 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pgrmc1O55022 195 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 AgtP11859 477 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Acsl1P41216 699 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ccr1P51675 355 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cyp2c39P56656 490 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Taf3Q5HZG4 932 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mybpc2Q5XKE0 1136 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mrps31Q61733 384 aaKnown RBP9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ctnna3Q65CL1 895 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tbc1d31Q6NXY1 996 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Epn1Q80VP1 575 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tmem161bQ8C2L6 487 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pop1Q8K205 1045 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Serpina10Q8R121 448 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Rtfdc1Q99K95 307 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 1700020D05RikQ99PB1 294 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Abcb6Q9DC29 842 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pidd1Q9ERV7 915 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fmnl1Q9JL26 1094 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Klra10Q9R1G6 266 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tlk2O55047 718 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 AdssP46664 456 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 SlmapQ3URD3 845 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Zfp957Q3UT76 567 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Oog4Q4G0C7 502 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fam214aQ69ZK7 1075 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Rhbdf1Q6PIX5 856 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Frmd3Q8BHD4 595 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 D130040H23RikQ8BII3 405 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ttc26Q8BS45 554 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Rapgef5Q8C0Q9 814 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mamdc2Q8CG85 686 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Vmn1r191Q8K4D0 298 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Klhl20Q8VCK5 604 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tekt1Q9DAJ2 418 aa9.5□□□□□ -0.89
Trim39-201ENSMUST00000042717 Atad5Q4QY64 1826 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 4930544D05RikJ3QK56 214 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Irs1P35569 1233 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 EdnrbP48302 442 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 MafP54843 370 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 SobpQ0P5V2 864 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Adamts18Q4VC17 1219 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 FcgrtQ61559 365 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tlr13Q6R5N8 991 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ano5Q75UR0 904 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pdcl2Q78Y63 240 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Usp37Q8C0R0 979 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Olfr395Q8VGR3 312 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Olig1Q9JKN5 260 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tlr5Q9JLF7 859 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tll2Q9WVM6 1012 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fmr1P35922 614 aaKnown RBP9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Samsn1P57725 372 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 PrkczQ02956 592 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 L1td1Q587J6 782 aaKnown RBP9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 LbpQ61805 481 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mtmr10Q7TPM9 771 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Dzip3Q7TPV2 1204 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pramel7Q810Y8 479 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ppp2r2cQ8BG02 447 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Drd5Q8BLD9 478 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gpr180Q8BPS4 441 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Pkn2Q8BWW9 983 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Celf3Q8CIN6 465 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Xpo5Q924C1 1204 aaKnown RBP9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tmod3Q9JHJ0 352 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Hyou1Q9JKR6 999 aaKnown RBP9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cdc42ep5Q9Z0X0 150 aa9.49□□□□□ -0.89
Trim39-201ENSMUST00000042717 Odf2A3KGV1 830 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Fam129cD3YZB0 591 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 ByslO54825 436 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 SarsP26638 512 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Gjb1P28230 283 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Actn4P57780 912 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ogfod1Q3U0K8 545 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Cyp4f37Q3V1F1 546 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Wdr18Q4VBE8 431 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Klra7Q60654 280 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mkrn3Q60764 544 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ccpg1Q640L3 753 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 GartQ64737 1010 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ppp2r5aQ6PD03 486 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tcaf3Q6QR59 914 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 LppQ8BFW7 613 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tcaf1Q8BNE1 924 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Elmo3Q8BYZ7 720 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mettl24Q8CCB5 363 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Sgms1Q8VCQ6 419 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Dis3Q9CSH3 958 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Ipo7Q9EPL8 1038 aaKnown RBP9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Usp29Q9ES63 869 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Lekr1B2RVN1 116 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Jakmip2D3YXK0 820 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Rnaseh1O70338 285 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Map2k1P31938 393 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Mgat3Q10470 538 aa9.48□□□□□ -0.89
Trim39-201ENSMUST00000042717 Tcf12Q61286 706 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms