RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Dnajc7Q9QYI3 494 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 ArcQ9WV31 396 aa17.6■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Abcb5B5X0E4 1255 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Zfp408H7BX78 710 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Msx3P70354 204 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tnip2Q99JG7 430 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Pfdn1Q9CWM4 122 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Kif23E9Q5G3 953 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Klc1O88447 541 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fnbp1Q80TY0 616 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Arfip2Q8K221 341 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Cnbd2Q9D5U8 673 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 PycardQ9EPB4 193 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Cdc27A2A6Q5 825 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Apol8A2VDH7 339 aaKnown RBP17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Atxn10P28658 475 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 EpgnQ924X1 152 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Mccc1Q99MR8 717 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Map3k15A2AQW0 1331 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tmem132bF7BAB2 1078 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gjb6P70689 261 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Sarm1Q6PDS3 724 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fthl17aQ9DAX0 182 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Serpinb6cW4VSP4 379 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 A0A1Y7VML8 143 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Map7d3A2AEY4 876 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gbp11A9YVJ5 442 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Avpr1aQ62463 423 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Slc12a8Q8VI23 705 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Rrp1bQ91YK2 724 aaKnown RBP17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fem1bQ9Z2G0 627 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Hdac6Q9Z2V5 1149 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Sik3Q6P4S6 1311 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Fbxo44Q8BK26 255 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ahi1Q8K3E5 1047 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 ParvbQ9ES46 365 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Gdf11Q9Z1W4 405 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Zfp850J3QPC5 689 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 CatspereP0DP43 985 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Krt72Q6IME9 520 aa17.59■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 PtgdrP70263 357 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Npas2P97460 816 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tmem132cQ8CEF9 1099 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Rgs10Q9CQE5 181 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Olfr552E9Q545 317 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Terb1Q8C0V1 768 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 MlphQ91V27 590 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Tmod3Q9JHJ0 352 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Dot1lQ6XZL8 1540 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 RereQ80TZ9 1558 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Itpripl1A2ASA8 547 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Usp17leQ7M764 540 aa17.58■□□□□ 0.41
Ccdc88a-201ENSMUST00000040182 Ifnb1P01575 182 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gucy2cQ3UWA6 1072 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Phf21aQ6ZPK0 659 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 PrcpQ7TMR0 491 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gm1141B9EJU1 475 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rgs22G3UYX5 1258 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Hspa1aQ61696 641 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Atp6v0d2Q80SY3 350 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 AbraQ8BUZ1 375 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Cnpy3Q9DAU1 276 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Myo18aQ9JMH9 2050 aaKnown RBP17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gemin5Q8BX17 1502 aaKnown RBP17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Asprv1Q09PK2 339 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Timm50Q9D880 353 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Inf2Q0GNC1 1273 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Hsph1Q61699 858 aaKnown RBP17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rhot1Q8BG51 631 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trpa1Q8BLA8 1125 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Erp29P57759 262 aaKnown RBP17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Skiv2lQ6NZR5 1244 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Ston1Q8CDJ8 730 aa17.58■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Lrrc63A6H694 637 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Trappc3O55013 180 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Glra4Q61603 456 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Adat2Q6P6J0 191 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Dnajc28Q8VCE1 385 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Anapc4Q91W96 807 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gtf2ird1Q9JI57 1104 aaKnown RBP17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Add2Q9QYB8 725 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Anapc7Q9WVM3 565 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Armc12Q80X86 340 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rbbp8Q80YR6 893 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Znrd1-asQ8R0E5 213 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Wdr47Q8CGF6 920 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Scyl3Q9DBQ7 735 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Pi16Q9ET66 489 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Adssl1P28650 457 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Upb1Q8VC97 393 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Zcrb1Q9CZ96 217 aaKnown RBP17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Tnrc6bQ8BKI2 1810 aaKnown RBP17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 GckP52792 465 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Casp4P70343 373 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Rrp36Q3UFY0 244 aaKnown RBP17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Kctd1Q5M956 257 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Acap3Q6NXL5 833 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Atl2Q6PA06 583 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Gins2Q9D600 185 aa17.57■□□□□ 0.4
Ccdc88a-201ENSMUST00000040182 Knl1Q66JQ7 1612 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms