RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Fgfr4Q03142 799 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ice2Q3UZ18 988 aaKnown RBP16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ccdc84Q4VA36 332 aaKnown RBP16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ccdc92bQ5SUE3 299 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Atp2b4Q6Q477 1205 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Scfd1Q8BRF7 639 aaKnown RBP16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Lmo3Q8BZL8 145 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Efl1Q8C0D5 1127 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 CnstQ8CBC4 711 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Champ1Q8K327 802 aaKnown RBP16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Havcr2Q8VIM0 281 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Q922C1 641 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Akt1s1Q9D1F4 257 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 SmapQ9R0P4 181 aaKnown RBP16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Astn1Q61137 1302 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Col4a5Q63ZW6 1691 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Mmrn1B2RPV6 1210 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Rasal2E9PW37 1286 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Vmn2r77L7N2B7 854 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Nrg3O35181 713 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Cacnb3P54285 484 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Dok7Q18PE0 504 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Acot6Q32Q92 419 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 TraddQ3U0V2 310 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Abl2Q4JIM5 1182 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Kiaa0319Q5SZV5 1081 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ppp2r5aQ6PD03 486 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ssxb10Q6XAR7 170 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Znf18Q810A1 556 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Btbd7Q8CFE5 1130 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Unc5bQ8K1S3 945 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Atp2a1Q8R429 994 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Atp6v1e2Q9D593 226 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ccdc91Q9D8L5 442 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Znf354bQ9QXT9 601 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Krt71Q9R0H5 524 aa16.19■□□□□ 0.18
Nup54-201ENSMUST00000038514 Fam205aA2APU8 1308 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gimap9G3X987 291 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gm5814J3QP80 125 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Abi2P62484 446 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 ItgaeQ60677 1167 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ctnna2Q61301 953 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Trpm8Q8R4D5 1104 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Slc14a1Q8VHL0 384 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Mrfap1Q9CQL7 125 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Thumpd2Q9CZB3 528 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 NynrinQ5DTZ0 1840 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Syngap1F6SEU4 1340 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Apba1B2RUJ5 842 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gm8994E9PV04 411 aaKnown RBP16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Frmd8Q3UFK8 466 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ttf2Q5NC05 1138 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Kif5bQ61768 963 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Trim37Q6PCX9 961 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ggt6Q6PDE7 497 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Atxn7Q8R4I1 867 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gimap4Q99JY3 219 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Rtn3Q9ES97 964 aa16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gys1Q9Z1E4 738 aaKnown RBP16.18■□□□□ 0.18
Nup54-201ENSMUST00000038514 Frmpd3A0A140LIW3 1774 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gm3127E9Q9P5 263 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Usp17ldG5E8G2 545 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Usp17lcG5E8I7 545 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gm3453K7N724 263 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Siah1bQ06985 282 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 YdjcQ14BV6 310 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Trmt1Q3TX08 663 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 CrkQ64010 304 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Fmnl3Q6ZPF4 1028 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Q8VDP2 222 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gmcl1Q920G9 524 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 4930449I24RikQ9D5E3 319 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Gtf2h1Q9DBA9 547 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ptf1aQ9QX98 324 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 Nrxn2E9Q7X7 1710 aa16.17■□□□□ 0.18
Nup54-201ENSMUST00000038514 4930523C07RikE9Q2T4 99 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ptprn2P80560 1001 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Cnot7Q60809 285 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Retreg2Q6NS82 541 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Uts2bQ765I1 113 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Depdc1bQ8BH88 529 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ago4Q8CJF8 861 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 MlxiplQ99MZ3 864 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Tacc3Q9JJ11 631 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Stk11Q9WTK7 436 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Patl2A2ARM1 529 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Skor2A7M7C7 1008 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Pex5O09012 639 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Rad51bO35719 350 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Cd68P31996 326 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Nt5c2Q3V1L4 560 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ctc1Q5SUQ9 1212 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ppp2r5cQ60996 524 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 TbataQ7TSD4 393 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 SpidrQ8BGX7 933 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 BbxQ8VBW5 907 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Ttc5Q99LG4 440 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Grk1Q9WVL4 564 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Mtmr2Q9Z2D1 643 aa16.16■□□□□ 0.18
Nup54-201ENSMUST00000038514 Adamtsl1Q8BLI0 1745 aa16.16■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms