RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 Ephb4P54761 987 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 YdjcQ14BV6 310 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Muc3aQ3U5A2 218 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 R3hdm2Q80TM6 1044 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Ccdc134Q8C7V8 229 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Pym1Q8CHP5 203 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Nup58Q8R332 587 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Pstpip2Q99M15 334 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Pabpc6Q9D4E6 643 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Nmt1O70310 496 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 CatspereP0DP43 985 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 FechP22315 420 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 NfibP97863 570 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Ttf2Q5NC05 1138 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Hdac10Q6P3E7 666 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Dync1li2Q6PDL0 492 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Champ1Q8K327 802 aaKnown RBP12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 AagabQ8R2R3 316 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Fam205a1D3YZF6 1314 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Adamtsl1Q8BLI0 1745 aa12.91□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Ttc38A3KMP2 465 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Fam71aB7XG49 585 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Cetn3O35648 167 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Idh1O88844 414 aaKnown RBP12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Agbl1Q09M05 972 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Trmt1Q3TX08 663 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 SynrgQ5SV85 1306 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Zdhhc24Q6IR37 284 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Gramd4Q8CB44 633 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Anapc4Q91W96 807 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Snx10Q9CWT3 201 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Krt71Q9R0H5 524 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Nfs1Q9Z1J3 459 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Trappc11B2RXC1 1133 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Kcnu1O54982 1121 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Cep126Q0VBV7 1103 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Abl2Q4JIM5 1182 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Pla2g4eQ50L42 875 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Dph1Q5NCQ5 438 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 TwistnbQ78WZ7 330 aaKnown RBP12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Kirrel3Q8BR86 778 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Ccdc28aQ8CEI3 192 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Scyl2Q8CFE4 930 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Calml4Q91WQ9 153 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Slc25a38Q91XD8 326 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Ly6iQ9WU67 134 aa12.9□□□□□ -0.34
Ptchd3-201ENSMUST00000036690 Fbf1A2A870 1173 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Zfy1P10925 782 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Etv6P97360 485 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Tom1l2Q5SRX1 507 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Kif5bQ61768 963 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Nr2e1Q64104 385 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 CbarpQ66L44 698 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 LdhdQ7TNG8 484 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Sap130Q8BIH0 1057 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Tbx22Q8K402 517 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Xpo6Q924Z6 1125 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Acsl3Q9CZW4 720 aaKnown RBP12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Atp6v1e2Q9D593 226 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 C87977A2A958 498 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Apba1B2RUJ5 842 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Scgb2b7D3YYY1 112 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Gm5814J3QP80 125 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Casp8O89110 480 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 H2afzP0C0S6 128 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Rbm46P86049 533 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 H2afvQ3THW5 128 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Mier3Q3UHF3 551 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 HnrnpdQ60668 355 aaKnown RBP12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Sin3bQ62141 1098 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Mcf2lQ64096 1149 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Rps6ka6Q7TPS0 764 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Pank4Q80YV4 820 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Atp5c1Q91VR2 298 aaKnown RBP12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ranbp17Q99NF8 1088 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Mrfap1Q9CQL7 125 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Dph5Q9CWQ0 281 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ubiad1Q9DC60 336 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Net1Q9Z206 595 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Serpinb6cW4VSP4 379 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ap1b1O35643 943 aaKnown RBP12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 GclcP97494 637 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Klra9Q2TJJ8 266 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Stambpl1Q76N33 436 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Pwp2Q8BU03 919 aaKnown RBP12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Rbm41Q8JZV4 413 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ccdc65Q8VHI7 493 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ddah1Q9CWS0 285 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Q9CYI0 393 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ifi202Q9R002 445 aa12.89□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Gm4758L7N258 96 aa12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Ccdc84Q4VA36 332 aaKnown RBP12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Q6PD19 689 aa12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Sestd1Q80UK0 696 aa12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Pgrmc2Q80UU9 217 aaKnown RBP12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Sgms1Q8VCQ6 419 aa12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Q922C1 641 aa12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Edf1Q9JMG1 148 aaKnown RBP12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Rnf4Q9QZS2 194 aa12.88□□□□□ -0.35
Ptchd3-201ENSMUST00000036690 Hsf3D0VYS2 492 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 44.6 ms