RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B JJJ3P47138 172 aa2.87□□□□□ -1.95
snR39BsnR39B YJR098CP47139 656 aa2.87□□□□□ -1.95
snR39BsnR39B NSG2P53898 299 aa2.87□□□□□ -1.95
snR39BsnR39B YMR196WQ04336 1088 aa2.87□□□□□ -1.95
snR39BsnR39B YDL206WQ12424 762 aa2.87□□□□□ -1.95
snR39BsnR39B TCB1Q12466 1186 aa2.87□□□□□ -1.95
snR39BsnR39B AI1P03875 834 aa2.86□□□□□ -1.95
snR39BsnR39B NIS1P53939 407 aa2.86□□□□□ -1.95
snR39BsnR39B SBP1P10080 294 aaKnown RBP2.85□□□□□ -1.95
snR39BsnR39B YBL086CP38177 466 aa2.85□□□□□ -1.95
snR39BsnR39B DLD1P32891 587 aa2.83□□□□□ -1.96
snR39BsnR39B MDJ1P35191 511 aa2.83□□□□□ -1.96
snR39BsnR39B CCT8P47079 568 aaKnown RBP2.83□□□□□ -1.96
snR39BsnR39B FPK1P53739 893 aa2.83□□□□□ -1.96
snR39BsnR39B THI72Q08579 599 aa2.83□□□□□ -1.96
snR39BsnR39B CCP1P00431 361 aa2.82□□□□□ -1.96
snR39BsnR39B VAC17P25591 423 aa2.82□□□□□ -1.96
snR39BsnR39B YPR053CQ6Q5F3 151 aa2.82□□□□□ -1.96
snR39BsnR39B TRM1P15565 570 aaKnown RBP2.81□□□□□ -1.96
snR39BsnR39B DSF2P38213 736 aa2.8□□□□□ -1.96
snR39BsnR39B IES2P40154 320 aa2.8□□□□□ -1.96
snR39BsnR39B EMW1P42842 904 aaKnown RBP2.8□□□□□ -1.96
snR39BsnR39B VTC4P47075 721 aa2.8□□□□□ -1.96
snR39BsnR39B HST2P53686 357 aa2.8□□□□□ -1.96
snR39BsnR39B CEM1P39525 442 aa2.79□□□□□ -1.96
snR39BsnR39B ADE12P80210 433 aaKnown RBP2.79□□□□□ -1.96
snR39BsnR39B RPP2BP02400 110 aaKnown RBP2.78□□□□□ -1.96
snR39BsnR39B YFL066CP43538 392 aa2.78□□□□□ -1.96
snR39BsnR39B BDS1Q08347 646 aa2.78□□□□□ -1.96
snR39BsnR39B MMP1Q12372 583 aa2.78□□□□□ -1.96
snR39BsnR39B CDC19P00549 500 aaKnown RBP2.77□□□□□ -1.97
snR39BsnR39B MKS1P34072 584 aa2.77□□□□□ -1.97
snR39BsnR39B SKN7P38889 622 aa2.77□□□□□ -1.97
snR39BsnR39B NUP42P49686 430 aaKnown RBP2.77□□□□□ -1.97
snR39BsnR39B APP1P53933 587 aa2.77□□□□□ -1.97
snR39BsnR39B YMR187CQ03236 431 aa2.77□□□□□ -1.97
snR39BsnR39B GLN1P32288 370 aaKnown RBP2.76□□□□□ -1.97
snR39BsnR39B CUZ1P53899 274 aa2.76□□□□□ -1.97
snR39BsnR39B NAM8Q00539 523 aaKnown RBP2.75□□□□□ -1.97
snR39BsnR39B DFG5Q05031 458 aa2.75□□□□□ -1.97
snR39BsnR39B DAL1P32375 460 aa2.74□□□□□ -1.97
snR39BsnR39B FBP26P32604 452 aa2.74□□□□□ -1.97
snR39BsnR39B STE6P12866 1290 aa2.73□□□□□ -1.97
snR39BsnR39B DIT1P21623 536 aa2.73□□□□□ -1.97
snR39BsnR39B SCJ1P25303 377 aa2.73□□□□□ -1.97
snR39BsnR39B MCX1P38323 520 aaPredicted RBP2.73□□□□□ -1.97
snR39BsnR39B DLD3P39976 496 aaKnown RBP2.73□□□□□ -1.97
snR39BsnR39B YMR265CQ03508 461 aaKnown RBP2.73□□□□□ -1.97
snR39BsnR39B TDA6Q06466 467 aa2.73□□□□□ -1.97
snR39BsnR39B SYT1Q06836 1226 aa2.73□□□□□ -1.97
snR39BsnR39B YDR461C-AQ2V2P7 80 aa2.73□□□□□ -1.97
snR39BsnR39B DIT2P21595 489 aa2.72□□□□□ -1.97
snR39BsnR39B UBP15P50101 1230 aa2.72□□□□□ -1.97
snR39BsnR39B YNR014WP53719 212 aa2.72□□□□□ -1.97
snR39BsnR39B SPB4P25808 606 aaPredicted RBP2.71□□□□□ -1.98
snR39BsnR39B MET1P36150 593 aa2.71□□□□□ -1.98
snR39BsnR39B ATF2P53296 535 aa2.71□□□□□ -1.98
snR39BsnR39B ESS1P22696 170 aa2.7□□□□□ -1.98
snR39BsnR39B MAC1P35192 417 aa2.7□□□□□ -1.98
snR39BsnR39B KRE33P53914 1056 aaKnown RBP2.7□□□□□ -1.98
snR39BsnR39B TEC1P18412 486 aa2.69□□□□□ -1.98
snR39BsnR39B RSC30P38781 883 aa2.69□□□□□ -1.98
snR39BsnR39B IRC24P40580 263 aa2.69□□□□□ -1.98
snR39BsnR39B SBE2P42223 864 aaKnown RBP2.69□□□□□ -1.98
snR39BsnR39B FIG4P42837 879 aa2.69□□□□□ -1.98
snR39BsnR39B MSN5P52918 1224 aa2.69□□□□□ -1.98
snR39BsnR39B ARG8P18544 423 aa2.68□□□□□ -1.98
snR39BsnR39B BOI2P39969 1040 aa2.68□□□□□ -1.98
snR39BsnR39B ISU1Q03020 165 aa2.68□□□□□ -1.98
snR39BsnR39B YJU3P28321 313 aa2.67□□□□□ -1.98
snR39BsnR39B AHP1P38013 176 aaKnown RBP2.67□□□□□ -1.98
snR39BsnR39B TAT1P38085 619 aa2.67□□□□□ -1.98
snR39BsnR39B LSB6P42951 607 aa2.67□□□□□ -1.98
snR39BsnR39B PKH3Q03306 898 aaPredicted RBP2.67□□□□□ -1.98
snR39BsnR39B ITT1Q04638 464 aa2.67□□□□□ -1.98
snR39BsnR39B FPS1P23900 669 aa2.66□□□□□ -1.98
snR39BsnR39B GUT2P32191 649 aa2.66□□□□□ -1.98
snR39BsnR39B AMN1P38285 549 aaPredicted RBP2.66□□□□□ -1.98
snR39BsnR39B ATG20Q07528 640 aa2.66□□□□□ -1.98
snR39BsnR39B GPM1P00950 247 aaKnown RBP2.65□□□□□ -1.99
snR39BsnR39B RPP1AP05318 106 aaPredicted RBP2.65□□□□□ -1.99
snR39BsnR39B SAS10Q12136 610 aaPredicted RBP2.65□□□□□ -1.99
snR39BsnR39B YDR215CQ12240 137 aa2.65□□□□□ -1.99
snR39BsnR39B GLT1Q12680 2145 aaKnown RBP2.65□□□□□ -1.99
snR39BsnR39B YCK2P23292 546 aaKnown RBP2.64□□□□□ -1.99
snR39BsnR39B KNS1P32350 737 aaPredicted RBP2.63□□□□□ -1.99
snR39BsnR39B SSN3P39073 555 aa2.63□□□□□ -1.99
snR39BsnR39B SLA1P32790 1244 aa2.62□□□□□ -1.99
snR39BsnR39B TBS1P38114 1094 aa2.62□□□□□ -1.99
snR39BsnR39B STE20Q03497 939 aaKnown RBP2.62□□□□□ -1.99
snR39BsnR39B YPR084WQ06821 456 aa2.62□□□□□ -1.99
snR39BsnR39B OMA1P36163 345 aa2.61□□□□□ -1.99
snR39BsnR39B SLN1P39928 1220 aaPredicted RBP2.61□□□□□ -1.99
snR39BsnR39B MRX12P47084 519 aa2.61□□□□□ -1.99
snR39BsnR39B YNR021WP53723 404 aaKnown RBP2.61□□□□□ -1.99
snR39BsnR39B NAF1P53919 492 aaKnown RBP2.61□□□□□ -1.99
snR39BsnR39B YPL034WQ03083 165 aa2.61□□□□□ -1.99
snR39BsnR39B WTM2Q12206 467 aa2.61□□□□□ -1.99
snR39BsnR39B SPT2P06843 333 aaPredicted RBP2.6□□□□□ -1.99
snR39BsnR39B DAT1P13483 248 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms