RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C ZDS1P50111 915 aaKnown RBP10.5□□□□□ -0.73
SRP54YPR088C ADE16P54113 591 aaKnown RBP10.49□□□□□ -0.73
SRP54YPR088C NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
SRP54YPR088C NUP145P49687 1317 aa10.49□□□□□ -0.73
SRP54YPR088C DOT5P40553 215 aa10.48□□□□□ -0.73
SRP54YPR088C GYP7P48365 746 aa10.47□□□□□ -0.73
SRP54YPR088C KCC4P25389 1037 aa10.47□□□□□ -0.73
SRP54YPR088C OSM1P21375 501 aaKnown RBP10.46□□□□□ -0.74
SRP54YPR088C UGA3P26370 528 aa10.46□□□□□ -0.74
SRP54YPR088C RRT14P40470 206 aa10.46□□□□□ -0.74
SRP54YPR088C FRK1Q03002 865 aaPredicted RBP10.46□□□□□ -0.74
SRP54YPR088C FOX2Q02207 900 aaKnown RBP10.45□□□□□ -0.74
SRP54YPR088C NSE3Q05541 303 aa10.45□□□□□ -0.74
SRP54YPR088C ATG13Q06628 738 aa10.45□□□□□ -0.74
SRP54YPR088C EDE1P34216 1381 aa10.44□□□□□ -0.74
SRP54YPR088C FUN12P39730 1002 aaKnown RBP10.44□□□□□ -0.74
SRP54YPR088C COBP00163 385 aa10.43□□□□□ -0.74
SRP54YPR088C YFR016CP43597 1233 aaKnown RBP10.43□□□□□ -0.74
SRP54YPR088C BMS1Q08965 1183 aaKnown RBP10.43□□□□□ -0.74
SRP54YPR088C MAK21Q12176 1025 aaKnown RBP10.43□□□□□ -0.74
SRP54YPR088C YMR074CQ04773 145 aa10.41□□□□□ -0.74
SRP54YPR088C LYS2P07702 1392 aa10.41□□□□□ -0.74
SRP54YPR088C COQ4O13525 335 aa10.4□□□□□ -0.74
SRP54YPR088C RAD2P07276 1031 aa10.4□□□□□ -0.74
SRP54YPR088C YBP2P53169 641 aa10.4□□□□□ -0.74
SRP54YPR088C SRT1Q03175 343 aa10.4□□□□□ -0.74
SRP54YPR088C YKR075CP36155 307 aa10.4□□□□□ -0.75
SRP54YPR088C YBR287WP38355 427 aa10.4□□□□□ -0.75
SRP54YPR088C YIL092WP40497 633 aa10.4□□□□□ -0.75
SRP54YPR088C LAM6Q08001 693 aa10.4□□□□□ -0.75
SRP54YPR088C BUD27P43573 796 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
SRP54YPR088C DAL5P15365 543 aa10.38□□□□□ -0.75
SRP54YPR088C GLN1P32288 370 aaKnown RBP10.38□□□□□ -0.75
SRP54YPR088C ALE1Q08548 619 aa10.38□□□□□ -0.75
SRP54YPR088C RPN11P43588 306 aaKnown RBP10.37□□□□□ -0.75
SRP54YPR088C RMT2Q03305 412 aa10.36□□□□□ -0.75
SRP54YPR088C GRX1P25373 110 aaKnown RBP10.36□□□□□ -0.75
SRP54YPR088C PRP40P33203 583 aaKnown RBP10.36□□□□□ -0.75
SRP54YPR088C YOL057WQ08225 711 aa10.36□□□□□ -0.75
SRP54YPR088C RIM15P43565 1770 aa10.35□□□□□ -0.75
SRP54YPR088C RAD4P14736 754 aa10.35□□□□□ -0.75
SRP54YPR088C YJL181WP46987 611 aa10.35□□□□□ -0.75
SRP54YPR088C FPR3P38911 411 aaKnown RBP10.34□□□□□ -0.75
SRP54YPR088C NOP2P40991 618 aaKnown RBP10.34□□□□□ -0.75
SRP54YPR088C TUM1Q08686 304 aaKnown RBP10.33□□□□□ -0.76
SRP54YPR088C NOP53Q12080 455 aaKnown RBP10.33□□□□□ -0.76
SRP54YPR088C YPP1P46951 817 aa10.32□□□□□ -0.76
SRP54YPR088C UBP1P25037 809 aa10.31□□□□□ -0.76
SRP54YPR088C NPR2P39923 615 aa10.31□□□□□ -0.76
SRP54YPR088C SSP2Q08646 371 aa10.3□□□□□ -0.76
SRP54YPR088C POL32P47110 350 aa10.29□□□□□ -0.76
SRP54YPR088C MDG1P53885 366 aa10.29□□□□□ -0.76
SRP54YPR088C MSB4Q12317 492 aa10.29□□□□□ -0.76
SRP54YPR088C MRP7P12687 371 aa10.29□□□□□ -0.76
SRP54YPR088C BUD31P25337 157 aaPredicted RBP10.29□□□□□ -0.76
SRP54YPR088C ZDS2P54786 942 aa10.29□□□□□ -0.76
SRP54YPR088C DNM1P54861 757 aa10.29□□□□□ -0.76
SRP54YPR088C YDR306CQ06640 478 aa10.29□□□□□ -0.76
SRP54YPR088C CSI1Q04368 295 aa10.28□□□□□ -0.76
SRP54YPR088C TRP5P00931 707 aaKnown RBP10.27□□□□□ -0.77
SRP54YPR088C RPS19AP07280 144 aaKnown RBP10.27□□□□□ -0.77
SRP54YPR088C RPS19BP07281 144 aaPredicted RBP10.27□□□□□ -0.77
SRP54YPR088C NOP8Q08287 484 aaPredicted RBP10.27□□□□□ -0.77
SRP54YPR088C PHM7Q12252 991 aa10.27□□□□□ -0.77
SRP54YPR088C CST6P40535 587 aa10.25□□□□□ -0.77
SRP54YPR088C PUF6Q04373 656 aaKnown RBP10.25□□□□□ -0.77
SRP54YPR088C GRE2Q12068 342 aaKnown RBP10.25□□□□□ -0.77
SRP54YPR088C VPS64Q03944 604 aa10.25□□□□□ -0.77
SRP54YPR088C RAD24P32641 659 aa10.24□□□□□ -0.77
SRP54YPR088C YJR008WP47085 338 aa10.24□□□□□ -0.77
SRP54YPR088C YGR122WP53272 402 aa10.24□□□□□ -0.77
SRP54YPR088C NUP133P36161 1157 aa10.23□□□□□ -0.77
SRP54YPR088C YNG2P38806 282 aaKnown RBP10.23□□□□□ -0.77
SRP54YPR088C YPR204WQ08995 1032 aa10.23□□□□□ -0.77
SRP54YPR088C SWI1P09547 1314 aa10.23□□□□□ -0.77
SRP54YPR088C ARG8P18544 423 aa10.22□□□□□ -0.77
SRP54YPR088C APL2P36000 726 aaPredicted RBP10.22□□□□□ -0.77
SRP54YPR088C TEA1P47988 759 aa10.22□□□□□ -0.77
SRP54YPR088C LYS4P49367 693 aaPredicted RBP10.22□□□□□ -0.77
SRP54YPR088C NYV1Q12255 253 aa10.21□□□□□ -0.78
SRP54YPR088C SER1P33330 395 aaKnown RBP10.2□□□□□ -0.78
SRP54YPR088C BOI2P39969 1040 aa10.2□□□□□ -0.78
SRP54YPR088C YLR271WQ06152 274 aa10.2□□□□□ -0.78
SRP54YPR088C SWC3P31376 625 aa10.19□□□□□ -0.78
SRP54YPR088C SPO1P53541 631 aa10.19□□□□□ -0.78
SRP54YPR088C BUG1Q12191 341 aa10.19□□□□□ -0.78
SRP54YPR088C DCD1P06773 312 aa10.18□□□□□ -0.78
SRP54YPR088C BDF1P35817 686 aa10.18□□□□□ -0.78
SRP54YPR088C YGL082WP53155 381 aa10.18□□□□□ -0.78
SRP54YPR088C PRI1P10363 409 aa10.18□□□□□ -0.78
SRP54YPR088C SET1P38827 1080 aaKnown RBP10.18□□□□□ -0.78
SRP54YPR088C ILV3P39522 585 aaKnown RBP10.18□□□□□ -0.78
SRP54YPR088C GTT3P39996 337 aa10.18□□□□□ -0.78
SRP54YPR088C HGH1P48362 394 aaKnown RBP10.18□□□□□ -0.78
SRP54YPR088C UTP10P42945 1769 aaKnown RBP10.17□□□□□ -0.78
SRP54YPR088C LPD1P09624 499 aaKnown RBP10.17□□□□□ -0.78
SRP54YPR088C GCD7P32502 381 aaPredicted RBP10.16□□□□□ -0.78
SRP54YPR088C UBP12P39538 1254 aa10.16□□□□□ -0.78
SRP54YPR088C ALD2P47771 506 aa10.16□□□□□ -0.78
SRP54YPR088C CTH1P47976 325 aa10.16□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms