RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W FPR3P38911 411 aaKnown RBP11.7□□□□□ -0.54
BRR1YPR057W INP54Q08227 384 aaKnown RBP11.7□□□□□ -0.54
BRR1YPR057W DAL5P15365 543 aa11.69□□□□□ -0.54
BRR1YPR057W EDE1P34216 1381 aa11.68□□□□□ -0.54
BRR1YPR057W NUP145P49687 1317 aa11.68□□□□□ -0.54
BRR1YPR057W UGA3P26370 528 aa11.68□□□□□ -0.54
BRR1YPR057W MEC3Q02574 474 aa11.68□□□□□ -0.54
BRR1YPR057W YFR016CP43597 1233 aaKnown RBP11.67□□□□□ -0.54
BRR1YPR057W IMH1Q06704 911 aaKnown RBP11.67□□□□□ -0.54
BRR1YPR057W KCC4P25389 1037 aa11.66□□□□□ -0.54
BRR1YPR057W SRT1Q03175 343 aa11.66□□□□□ -0.54
BRR1YPR057W NSE3Q05541 303 aa11.66□□□□□ -0.54
BRR1YPR057W BMS1Q08965 1183 aaKnown RBP11.66□□□□□ -0.54
BRR1YPR057W YKL133CP36066 463 aa11.65□□□□□ -0.54
BRR1YPR057W TFA1P36100 482 aa11.65□□□□□ -0.54
BRR1YPR057W ADE16P54113 591 aaKnown RBP11.65□□□□□ -0.54
BRR1YPR057W COQ4O13525 335 aa11.64□□□□□ -0.55
BRR1YPR057W FAP1P53971 965 aa11.64□□□□□ -0.55
BRR1YPR057W YBR287WP38355 427 aa11.63□□□□□ -0.55
BRR1YPR057W OSM1P21375 501 aaKnown RBP11.62□□□□□ -0.55
BRR1YPR057W LYS2P07702 1392 aa11.62□□□□□ -0.55
BRR1YPR057W POL32P47110 350 aa11.61□□□□□ -0.55
BRR1YPR057W ROM2P51862 1356 aaKnown RBP11.61□□□□□ -0.55
BRR1YPR057W FRK1Q03002 865 aaPredicted RBP11.59□□□□□ -0.55
BRR1YPR057W YPP1P46951 817 aa11.58□□□□□ -0.56
BRR1YPR057W ATG13Q06628 738 aa11.58□□□□□ -0.56
BRR1YPR057W YOL057WQ08225 711 aa11.58□□□□□ -0.56
BRR1YPR057W ALE1Q08548 619 aa11.57□□□□□ -0.56
BRR1YPR057W TRP5P00931 707 aaKnown RBP11.56□□□□□ -0.56
BRR1YPR057W RAD4P14736 754 aa11.56□□□□□ -0.56
BRR1YPR057W DOT5P40553 215 aa11.56□□□□□ -0.56
BRR1YPR057W PUF6Q04373 656 aaKnown RBP11.56□□□□□ -0.56
BRR1YPR057W YIL055CP40523 627 aaKnown RBP11.55□□□□□ -0.56
BRR1YPR057W YBP2P53169 641 aa11.55□□□□□ -0.56
BRR1YPR057W CSI1Q04368 295 aa11.55□□□□□ -0.56
BRR1YPR057W YRF1-3P0CX14 1859 aa11.55□□□□□ -0.56
BRR1YPR057W YRF1-7P0CX15 1859 aa11.55□□□□□ -0.56
BRR1YPR057W YRF1-6P53819 1859 aa11.55□□□□□ -0.56
BRR1YPR057W FOX2Q02207 900 aaKnown RBP11.54□□□□□ -0.56
BRR1YPR057W COBP00163 385 aa11.53□□□□□ -0.56
BRR1YPR057W RPC31P17890 251 aa11.53□□□□□ -0.56
BRR1YPR057W RPS19AP07280 144 aaKnown RBP11.52□□□□□ -0.57
BRR1YPR057W RPS19BP07281 144 aaPredicted RBP11.52□□□□□ -0.57
BRR1YPR057W RMT2Q03305 412 aa11.52□□□□□ -0.57
BRR1YPR057W YDR306CQ06640 478 aa11.52□□□□□ -0.57
BRR1YPR057W MRP7P12687 371 aa11.5□□□□□ -0.57
BRR1YPR057W YNG2P38806 282 aaKnown RBP11.5□□□□□ -0.57
BRR1YPR057W NOP8Q08287 484 aaPredicted RBP11.5□□□□□ -0.57
BRR1YPR057W RAD24P32641 659 aa11.49□□□□□ -0.57
BRR1YPR057W YKR075CP36155 307 aa11.49□□□□□ -0.57
BRR1YPR057W ZDS2P54786 942 aa11.49□□□□□ -0.57
BRR1YPR057W DNM1P54861 757 aa11.49□□□□□ -0.57
BRR1YPR057W YGR122WP53272 402 aa11.48□□□□□ -0.57
BRR1YPR057W NOP53Q12080 455 aaKnown RBP11.48□□□□□ -0.57
BRR1YPR057W GRX1P25373 110 aaKnown RBP11.47□□□□□ -0.57
BRR1YPR057W ILV3P39522 585 aaKnown RBP11.47□□□□□ -0.57
BRR1YPR057W TUM1Q08686 304 aaKnown RBP11.47□□□□□ -0.57
BRR1YPR057W CST6P40535 587 aa11.46□□□□□ -0.57
BRR1YPR057W SPO1P53541 631 aa11.46□□□□□ -0.57
BRR1YPR057W LAM6Q08001 693 aa11.46□□□□□ -0.57
BRR1YPR057W YJR008WP47085 338 aa11.45□□□□□ -0.58
BRR1YPR057W SSP2Q08646 371 aa11.45□□□□□ -0.58
BRR1YPR057W BOI2P39969 1040 aa11.44□□□□□ -0.58
BRR1YPR057W SWI1P09547 1314 aa11.43□□□□□ -0.58
BRR1YPR057W SWC3P31376 625 aa11.43□□□□□ -0.58
BRR1YPR057W NUP133P36161 1157 aa11.43□□□□□ -0.58
BRR1YPR057W GCD7P32502 381 aaPredicted RBP11.42□□□□□ -0.58
BRR1YPR057W RPN11P43588 306 aaKnown RBP11.42□□□□□ -0.58
BRR1YPR057W MDG1P53885 366 aa11.42□□□□□ -0.58
BRR1YPR057W ECM16Q04217 1267 aaKnown RBP11.42□□□□□ -0.58
BRR1YPR057W PHM7Q12252 991 aa11.42□□□□□ -0.58
BRR1YPR057W PRP40P33203 583 aaKnown RBP11.41□□□□□ -0.58
BRR1YPR057W HGH1P48362 394 aaKnown RBP11.41□□□□□ -0.58
BRR1YPR057W VPS64Q03944 604 aa11.41□□□□□ -0.58
BRR1YPR057W YMR074CQ04773 145 aa11.4□□□□□ -0.58
BRR1YPR057W YPR204WQ08995 1032 aa11.4□□□□□ -0.58
BRR1YPR057W APL2P36000 726 aaPredicted RBP11.39□□□□□ -0.59
BRR1YPR057W NMD2P38798 1089 aaKnown RBP11.39□□□□□ -0.59
BRR1YPR057W YJL181WP46987 611 aa11.39□□□□□ -0.59
BRR1YPR057W ARG8P18544 423 aa11.38□□□□□ -0.59
BRR1YPR057W MSB4Q12317 492 aa11.38□□□□□ -0.59
BRR1YPR057W NPR2P39923 615 aa11.37□□□□□ -0.59
BRR1YPR057W YLR271WQ06152 274 aa11.37□□□□□ -0.59
BRR1YPR057W LPD1P09624 499 aaKnown RBP11.36□□□□□ -0.59
BRR1YPR057W SET1P38827 1080 aaKnown RBP11.36□□□□□ -0.59
BRR1YPR057W UBP12P39538 1254 aa11.36□□□□□ -0.59
BRR1YPR057W YIR014WP40570 242 aa11.35□□□□□ -0.59
BRR1YPR057W TEA1P47988 759 aa11.35□□□□□ -0.59
BRR1YPR057W NKP2Q06162 153 aa11.35□□□□□ -0.59
BRR1YPR057W GRE2Q12068 342 aaKnown RBP11.35□□□□□ -0.59
BRR1YPR057W DCD1P06773 312 aa11.34□□□□□ -0.59
BRR1YPR057W GLN1P32288 370 aaKnown RBP11.34□□□□□ -0.59
BRR1YPR057W RFC1P38630 861 aaKnown RBP11.34□□□□□ -0.59
BRR1YPR057W YGL082WP53155 381 aa11.32□□□□□ -0.6
BRR1YPR057W PKH1Q03407 766 aa11.32□□□□□ -0.6
BRR1YPR057W NYV1Q12255 253 aa11.32□□□□□ -0.6
BRR1YPR057W CDC16P09798 840 aa11.31□□□□□ -0.6
BRR1YPR057W UBP1P25037 809 aa11.31□□□□□ -0.6
BRR1YPR057W SER1P33330 395 aaKnown RBP11.31□□□□□ -0.6
BRR1YPR057W RAD50P12753 1312 aa11.31□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms