RNA–Protein interactions for RNA: YPR018W

RLF2, Transcript of Largest subunit (p90) of the Chromatin Assembly Complex (CAF-1), yeast

Gene RLF2, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLF2	YPR018W	AI1	P03875	834 aa		4.68	□□□□□ -1.66
RLF2	YPR018W	DLD1	P32891	587 aa		4.67	□□□□□ -1.66
RLF2	YPR018W	YPR053C	Q6Q5F3	151 aa		4.67	□□□□□ -1.66
RLF2	YPR018W	CLB5	P30283	435 aa		4.63	□□□□□ -1.67
RLF2	YPR018W	DMA2	P53924	522 aa		4.62	□□□□□ -1.67
RLF2	YPR018W	YPR148C	Q06523	435 aa		4.62	□□□□□ -1.67
RLF2	YPR018W	SKN7	P38889	622 aa		4.61	□□□□□ -1.67
RLF2	YPR018W	SIT4	P20604	311 aa		4.6	□□□□□ -1.67
RLF2	YPR018W	ALR1	Q08269	859 aa		4.6	□□□□□ -1.67
RLF2	YPR018W	PSE1	P32337	1089 aa	Known RBP	4.59	□□□□□ -1.67
RLF2	YPR018W	RPN1	P38764	993 aa	Known RBP	4.59	□□□□□ -1.67
RLF2	YPR018W	YBL086C	P38177	466 aa		4.58	□□□□□ -1.68
RLF2	YPR018W	RPA14	P50106	137 aa		4.58	□□□□□ -1.68
RLF2	YPR018W	NAM8	Q00539	523 aa	Known RBP	4.57	□□□□□ -1.68
RLF2	YPR018W	YPR097W	Q06839	1073 aa		4.57	□□□□□ -1.68
RLF2	YPR018W	YMR187C	Q03236	431 aa		4.56	□□□□□ -1.68
RLF2	YPR018W	SPB4	P25808	606 aa	Predicted RBP	4.56	□□□□□ -1.68
RLF2	YPR018W	VPS70	P47161	811 aa		4.56	□□□□□ -1.68
RLF2	YPR018W	YDL206W	Q12424	762 aa		4.56	□□□□□ -1.68
RLF2	YPR018W	TDA6	Q06466	467 aa		4.55	□□□□□ -1.68
RLF2	YPR018W	GLT1	Q12680	2145 aa	Known RBP	4.53	□□□□□ -1.68
RLF2	YPR018W	SBE2	P42223	864 aa	Known RBP	4.53	□□□□□ -1.68
RLF2	YPR018W	CDC19	P00549	500 aa	Known RBP	4.52	□□□□□ -1.69
RLF2	YPR018W	SLY41	P22215	453 aa		4.52	□□□□□ -1.69
RLF2	YPR018W	TBF1	Q02457	562 aa		4.52	□□□□□ -1.69
RLF2	YPR018W	CUZ1	P53899	274 aa		4.51	□□□□□ -1.69
RLF2	YPR018W	CKB1	P43639	278 aa		4.51	□□□□□ -1.69
RLF2	YPR018W	CEM1	P39525	442 aa		4.5	□□□□□ -1.69
RLF2	YPR018W	NIS1	P53939	407 aa		4.49	□□□□□ -1.69
RLF2	YPR018W	ADE12	P80210	433 aa	Known RBP	4.49	□□□□□ -1.69
RLF2	YPR018W	PUS6	P53294	404 aa		4.49	□□□□□ -1.69
RLF2	YPR018W	APP1	P53933	587 aa		4.48	□□□□□ -1.69
RLF2	YPR018W	VAC17	P25591	423 aa		4.46	□□□□□ -1.7
RLF2	YPR018W	MAC1	P35192	417 aa		4.46	□□□□□ -1.7
RLF2	YPR018W	DSF2	P38213	736 aa		4.46	□□□□□ -1.7
RLF2	YPR018W	IRC24	P40580	263 aa		4.46	□□□□□ -1.7
RLF2	YPR018W	TEA1	P47988	759 aa		4.46	□□□□□ -1.7
RLF2	YPR018W	RLF2	Q12495	606 aa		4.45	□□□□□ -1.7
RLF2	YPR018W	PBS2	P08018	668 aa		4.44	□□□□□ -1.7
RLF2	YPR018W	YCK2	P23292	546 aa	Known RBP	4.44	□□□□□ -1.7
RLF2	YPR018W	AMN1	P38285	549 aa	Predicted RBP	4.44	□□□□□ -1.7
RLF2	YPR018W	MCX1	P38323	520 aa	Predicted RBP	4.43	□□□□□ -1.7
RLF2	YPR018W	EMW1	P42842	904 aa	Known RBP	4.43	□□□□□ -1.7
RLF2	YPR018W	YNR014W	P53719	212 aa		4.43	□□□□□ -1.7
RLF2	YPR018W	ITT1	Q04638	464 aa		4.43	□□□□□ -1.7
RLF2	YPR018W	KIN1	P13185	1064 aa		4.42	□□□□□ -1.7
RLF2	YPR018W	TRM1	P15565	570 aa	Known RBP	4.42	□□□□□ -1.7
RLF2	YPR018W	SYT1	Q06836	1226 aa		4.42	□□□□□ -1.7
RLF2	YPR018W	GLC3	P32775	704 aa		4.4	□□□□□ -1.7
RLF2	YPR018W	FPK1	P53739	893 aa		4.4	□□□□□ -1.7
RLF2	YPR018W	DFG5	Q05031	458 aa		4.4	□□□□□ -1.7
RLF2	YPR018W	VTC4	P47075	721 aa		4.39	□□□□□ -1.71
RLF2	YPR018W	YNR021W	P53723	404 aa	Known RBP	4.39	□□□□□ -1.71
RLF2	YPR018W	YPL034W	Q03083	165 aa		4.39	□□□□□ -1.71
RLF2	YPR018W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.39	□□□□□ -1.71	not detected
RLF2	YPR018W	LSB6	P42951	607 aa		4.39	□□□□□ -1.71
RLF2	YPR018W	YMR196W	Q04336	1088 aa		4.39	□□□□□ -1.71
RLF2	YPR018W	MCA1	Q08601	432 aa		4.39	□□□□□ -1.71
RLF2	YPR018W	YDR215C	Q12240	137 aa		4.39	□□□□□ -1.71
RLF2	YPR018W	DIT2	P21595	489 aa		4.37	□□□□□ -1.71
RLF2	YPR018W	MKS1	P34072	584 aa		4.37	□□□□□ -1.71
RLF2	YPR018W	SLN1	P39928	1220 aa	Predicted RBP	4.37	□□□□□ -1.71
RLF2	YPR018W	IES2	P40154	320 aa		4.37	□□□□□ -1.71
RLF2	YPR018W	YMR265C	Q03508	461 aa	Known RBP	4.37	□□□□□ -1.71
RLF2	YPR018W	MAM3	Q12296	706 aa		4.37	□□□□□ -1.71
RLF2	YPR018W	DIT1	P21623	536 aa		4.36	□□□□□ -1.71
RLF2	YPR018W	NUP42	P49686	430 aa	Known RBP	4.36	□□□□□ -1.71
RLF2	YPR018W	BDS1	Q08347	646 aa		4.36	□□□□□ -1.71
RLF2	YPR018W	GUA1	P38625	525 aa	Known RBP	4.35	□□□□□ -1.71
RLF2	YPR018W	KRE33	P53914	1056 aa	Known RBP	4.35	□□□□□ -1.71
RLF2	YPR018W	AIM7	Q12156	149 aa		4.35	□□□□□ -1.71
RLF2	YPR018W	BOI2	P39969	1040 aa		4.34	□□□□□ -1.71
RLF2	YPR018W	DAL1	P32375	460 aa		4.33	□□□□□ -1.72
RLF2	YPR018W	YDR461C-A	Q2V2P7	80 aa		4.33	□□□□□ -1.72
RLF2	YPR018W	SCJ1	P25303	377 aa		4.32	□□□□□ -1.72
RLF2	YPR018W	ALO1	P54783	526 aa	Known RBP	4.32	□□□□□ -1.72
RLF2	YPR018W	TAT1	P38085	619 aa		4.32	□□□□□ -1.72
RLF2	YPR018W	UBP15	P50101	1230 aa		4.29	□□□□□ -1.72
RLF2	YPR018W	OMA1	P36163	345 aa		4.28	□□□□□ -1.72
RLF2	YPR018W	ATF2	P53296	535 aa		4.28	□□□□□ -1.72
RLF2	YPR018W	GPM1	P00950	247 aa	Known RBP	4.28	□□□□□ -1.72
RLF2	YPR018W	FBP26	P32604	452 aa		4.28	□□□□□ -1.72
RLF2	YPR018W	HGH1	P48362	394 aa	Known RBP	4.28	□□□□□ -1.72
RLF2	YPR018W	STE6	P12866	1290 aa		4.27	□□□□□ -1.73
RLF2	YPR018W	INP52	P50942	1183 aa		4.27	□□□□□ -1.73
RLF2	YPR018W	HST2	P53686	357 aa		4.26	□□□□□ -1.73
RLF2	YPR018W	TFB3	Q03290	321 aa		4.26	□□□□□ -1.73
RLF2	YPR018W	HPC2	Q01448	625 aa		4.25	□□□□□ -1.73
RLF2	YPR018W	PKC1	P24583	1151 aa		4.24	□□□□□ -1.73
RLF2	YPR018W	MET1	P36150	593 aa		4.24	□□□□□ -1.73
RLF2	YPR018W	AVT1	P47082	602 aa		4.24	□□□□□ -1.73
RLF2	YPR018W	MMP1	Q12372	583 aa		4.24	□□□□□ -1.73
RLF2	YPR018W	PRY1	P47032	299 aa		4.23	□□□□□ -1.73
RLF2	YPR018W	FIG4	P42837	879 aa		4.21	□□□□□ -1.74
RLF2	YPR018W	NAF1	P53919	492 aa	Known RBP	4.2	□□□□□ -1.74
RLF2	YPR018W	ESS1	P22696	170 aa		4.19	□□□□□ -1.74
RLF2	YPR018W	SLA1	P32790	1244 aa		4.19	□□□□□ -1.74
RLF2	YPR018W	BRL1	P38770	471 aa		4.19	□□□□□ -1.74
RLF2	YPR018W	DLD3	P39976	496 aa	Known RBP	4.19	□□□□□ -1.74
RLF2	YPR018W	YML020W	Q03722	664 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms