RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W ALD4P46367 519 aaKnown RBP3.24□□□□□ -1.89
VPS16YPL045W APL6P46682 809 aa3.24□□□□□ -1.89
VPS16YPL045W NNF1P47149 201 aa3.24□□□□□ -1.89
VPS16YPL045W DOS2P54858 310 aa3.24□□□□□ -1.89
VPS16YPL045W JIP4Q03361 876 aa3.24□□□□□ -1.89
VPS16YPL045W YPR084WQ06821 456 aa3.24□□□□□ -1.89
VPS16YPL045W PUN1Q06991 263 aa3.24□□□□□ -1.89
VPS16YPL045W FRT1Q99332 602 aa3.24□□□□□ -1.89
VPS16YPL045W EAP1P36041 632 aaKnown RBP3.24□□□□□ -1.89
VPS16YPL045W ATG3P40344 310 aa3.24□□□□□ -1.89
VPS16YPL045W QDR1P40475 563 aa3.24□□□□□ -1.89
VPS16YPL045W CST6P40535 587 aa3.24□□□□□ -1.89
VPS16YPL045W AGE1Q04412 482 aa3.24□□□□□ -1.89
VPS16YPL045W NUT2Q06213 157 aa3.24□□□□□ -1.89
VPS16YPL045W MAG2Q06436 670 aaKnown RBP3.24□□□□□ -1.89
VPS16YPL045W SRS2P12954 1174 aa3.23□□□□□ -1.89
VPS16YPL045W TEC1P18412 486 aa3.23□□□□□ -1.89
VPS16YPL045W MET4P32389 672 aa3.23□□□□□ -1.89
VPS16YPL045W SOH1P38633 127 aa3.23□□□□□ -1.89
VPS16YPL045W GLO3P38682 493 aaKnown RBP3.23□□□□□ -1.89
VPS16YPL045W FIG4P42837 879 aa3.23□□□□□ -1.89
VPS16YPL045W ACF4P47129 309 aa3.23□□□□□ -1.89
VPS16YPL045W YJR107WP47145 328 aa3.23□□□□□ -1.89
VPS16YPL045W TUB4P53378 473 aa3.23□□□□□ -1.89
VPS16YPL045W NMA111P53920 997 aa3.23□□□□□ -1.89
VPS16YPL045W PML39Q03760 334 aa3.23□□□□□ -1.89
VPS16YPL045W UTP13Q05946 817 aaKnown RBP3.23□□□□□ -1.89
VPS16YPL045W FPR4Q06205 392 aaPredicted RBP3.23□□□□□ -1.89
VPS16YPL045W TSC13Q99190 310 aa3.23□□□□□ -1.89
VPS16YPL045W GUT2P32191 649 aa3.23□□□□□ -1.89
VPS16YPL045W MET1P36150 593 aa3.23□□□□□ -1.89
VPS16YPL045W MGE1P38523 228 aa3.23□□□□□ -1.89
VPS16YPL045W RPA14P50106 137 aa3.23□□□□□ -1.89
VPS16YPL045W JIP5Q06214 492 aaPredicted RBP3.23□□□□□ -1.89
VPS16YPL045W WSC3Q12215 556 aa3.23□□□□□ -1.89
VPS16YPL045W PDI1P17967 522 aaKnown RBP3.22□□□□□ -1.89
VPS16YPL045W PEX29Q03370 554 aa3.22□□□□□ -1.89
VPS16YPL045W YPR097WQ06839 1073 aa3.22□□□□□ -1.89
VPS16YPL045W GAS4Q08271 471 aa3.22□□□□□ -1.89
VPS16YPL045W NPL4P33755 580 aa3.22□□□□□ -1.89
VPS16YPL045W STR2P47164 639 aa3.22□□□□□ -1.89
VPS16YPL045W FAR11P53917 953 aa3.22□□□□□ -1.89
VPS16YPL045W PDR1P12383 1068 aa3.21□□□□□ -1.9
VPS16YPL045W RAM1P22007 431 aa3.21□□□□□ -1.9
VPS16YPL045W ISM1P48526 1002 aa3.21□□□□□ -1.9
VPS16YPL045W YAF9P53930 226 aa3.21□□□□□ -1.9
VPS16YPL045W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
VPS16YPL045W MNL2Q12205 849 aa3.21□□□□□ -1.9
VPS16YPL045W SEC2P17065 759 aa3.2□□□□□ -1.9
VPS16YPL045W NMD2P38798 1089 aaKnown RBP3.2□□□□□ -1.9
VPS16YPL045W YJL171CP46992 396 aa3.2□□□□□ -1.9
VPS16YPL045W ALR1Q08269 859 aa3.2□□□□□ -1.9
VPS16YPL045W YOL098CQ12496 1037 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-DR4O74302 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-HP0C2I4 478 aaKnown RBP3.2□□□□□ -1.9
VPS16YPL045W TY1A-AP0CX57 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-PR1P0CX58 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-ORP0CX59 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-PR2P0CX60 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-DR5P0CX65 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-ER2P0CX66 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-GR3P0CX67 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-LR1P0CX68 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-MR2P0CX69 440 aa3.2□□□□□ -1.9
VPS16YPL045W VAN1P23642 535 aa3.2□□□□□ -1.9
VPS16YPL045W SUV3P32580 737 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-JR2P47099 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-DR1Q03856 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-ML1Q04706 440 aaKnown RBP3.2□□□□□ -1.9
VPS16YPL045W TY1A-BRQ12217 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-NL2Q12470 440 aa3.2□□□□□ -1.9
VPS16YPL045W TY1A-GR2Q12485 440 aa3.2□□□□□ -1.9
VPS16YPL045W HAL5P38970 855 aaKnown RBP3.19□□□□□ -1.9
VPS16YPL045W LSO1Q3E827 93 aa3.19□□□□□ -1.9
VPS16YPL045W GCD11P32481 527 aaKnown RBP3.19□□□□□ -1.9
VPS16YPL045W FYV10P40492 516 aa3.19□□□□□ -1.9
VPS16YPL045W GPI13Q07830 1017 aa3.19□□□□□ -1.9
VPS16YPL045W TRS33Q99394 268 aa3.19□□□□□ -1.9
VPS16YPL045W PDC1P06169 563 aaKnown RBP3.18□□□□□ -1.9
VPS16YPL045W VAC8P39968 578 aa3.18□□□□□ -1.9
VPS16YPL045W AIM9P40053 627 aaKnown RBP3.18□□□□□ -1.9
VPS16YPL045W RNH70P53331 553 aa3.18□□□□□ -1.9
VPS16YPL045W ALD3P54114 506 aa3.18□□□□□ -1.9
VPS16YPL045W MIP1P15801 1254 aa3.18□□□□□ -1.9
VPS16YPL045W IXR1P33417 597 aa3.18□□□□□ -1.9
VPS16YPL045W BOI1P38041 980 aaKnown RBP3.18□□□□□ -1.9
VPS16YPL045W PAC1P39946 494 aaKnown RBP3.18□□□□□ -1.9
VPS16YPL045W ULI1P43604 169 aa3.18□□□□□ -1.9
VPS16YPL045W TRS120Q04183 1289 aa3.18□□□□□ -1.9
VPS16YPL045W SPR28Q04921 423 aa3.18□□□□□ -1.9
VPS16YPL045W VAC17P25591 423 aa3.17□□□□□ -1.9
VPS16YPL045W RPT1P33299 467 aaKnown RBP3.17□□□□□ -1.9
VPS16YPL045W YFL034WP43564 1073 aa3.17□□□□□ -1.9
VPS16YPL045W ALD6P54115 500 aaKnown RBP3.17□□□□□ -1.9
VPS16YPL045W ISR1Q06098 443 aaKnown RBP3.17□□□□□ -1.9
VPS16YPL045W HDA3Q06623 655 aa3.17□□□□□ -1.9
VPS16YPL045W YBL029C-AQ3E756 94 aa3.17□□□□□ -1.9
VPS16YPL045W PHO4P07270 312 aaKnown RBP3.17□□□□□ -1.9
VPS16YPL045W MCM2P29469 868 aa3.17□□□□□ -1.9
VPS16YPL045W NTH2P35172 780 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms