RNA–Protein interactions for RNA: YOR117W

RPT5, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT5, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT5YOR117W MPP10P47083 593 aaKnown RBP11.58□□□□□ -0.56
RPT5YOR117W AOS1Q06624 347 aa11.58□□□□□ -0.56
RPT5YOR117W INP54Q08227 384 aaKnown RBP11.58□□□□□ -0.56
RPT5YOR117W YRF1-3P0CX14 1859 aa11.57□□□□□ -0.56
RPT5YOR117W YRF1-7P0CX15 1859 aa11.57□□□□□ -0.56
RPT5YOR117W YRF1-6P53819 1859 aa11.57□□□□□ -0.56
RPT5YOR117W COBP00163 385 aa11.57□□□□□ -0.56
RPT5YOR117W FRK1Q03002 865 aaPredicted RBP11.57□□□□□ -0.56
RPT5YOR117W LAM6Q08001 693 aa11.57□□□□□ -0.56
RPT5YOR117W NTH2P35172 780 aa11.56□□□□□ -0.56
RPT5YOR117W RPN11P43588 306 aaKnown RBP11.56□□□□□ -0.56
RPT5YOR117W ATG13Q06628 738 aa11.56□□□□□ -0.56
RPT5YOR117W EDE1P34216 1381 aa11.56□□□□□ -0.56
RPT5YOR117W NSR1P27476 414 aaKnown RBP RIP-Chip data11.55□□□□□ -0.56not detected
RPT5YOR117W YJL181WP46987 611 aa11.55□□□□□ -0.56
RPT5YOR117W OSM1P21375 501 aaKnown RBP11.54□□□□□ -0.56
RPT5YOR117W UBP1P25037 809 aa11.54□□□□□ -0.56
RPT5YOR117W PRP40P33203 583 aaKnown RBP11.54□□□□□ -0.56
RPT5YOR117W MAP2P38174 421 aaKnown RBP11.54□□□□□ -0.56
RPT5YOR117W VPS27P40343 622 aaKnown RBP11.54□□□□□ -0.56
RPT5YOR117W YNL050CP53952 270 aa11.54□□□□□ -0.56
RPT5YOR117W NUP145P49687 1317 aa11.53□□□□□ -0.56
RPT5YOR117W THI22Q06490 572 aa11.53□□□□□ -0.56
RPT5YOR117W YKR075CP36155 307 aa11.52□□□□□ -0.57
RPT5YOR117W CDC45Q08032 650 aa11.51□□□□□ -0.57
RPT5YOR117W KCC4P25389 1037 aa11.5□□□□□ -0.57
RPT5YOR117W PRS1P32895 427 aaKnown RBP11.5□□□□□ -0.57
RPT5YOR117W SAP155P43612 1002 aa11.49□□□□□ -0.57
RPT5YOR117W ZDS1P50111 915 aaKnown RBP11.49□□□□□ -0.57
RPT5YOR117W UGA3P26370 528 aa11.48□□□□□ -0.57
RPT5YOR117W TPD3P31383 635 aa11.48□□□□□ -0.57
RPT5YOR117W MAM1P40065 302 aa11.48□□□□□ -0.57
RPT5YOR117W YBP2P53169 641 aa11.48□□□□□ -0.57
RPT5YOR117W NPR2P39923 615 aa11.47□□□□□ -0.57
RPT5YOR117W NSE3Q05541 303 aa11.47□□□□□ -0.57
RPT5YOR117W RTT109Q07794 436 aa11.47□□□□□ -0.57
RPT5YOR117W SUI2P20459 304 aaKnown RBP11.46□□□□□ -0.57
RPT5YOR117W HEF3P53978 1044 aaKnown RBP11.46□□□□□ -0.57
RPT5YOR117W GRX1P25373 110 aaKnown RBP11.45□□□□□ -0.58
RPT5YOR117W GYP7P48365 746 aa11.44□□□□□ -0.58
RPT5YOR117W YRB30P53107 440 aaPredicted RBP11.43□□□□□ -0.58
RPT5YOR117W RRT14P40470 206 aa11.42□□□□□ -0.58
RPT5YOR117W RMT2Q03305 412 aa11.42□□□□□ -0.58
RPT5YOR117W MSB4Q12317 492 aa11.42□□□□□ -0.58
RPT5YOR117W RVB2Q12464 471 aaKnown RBP11.42□□□□□ -0.58
RPT5YOR117W ALE1Q08548 619 aa11.41□□□□□ -0.58
RPT5YOR117W BMS1Q08965 1183 aaKnown RBP11.41□□□□□ -0.58
RPT5YOR117W YKR023WP36119 530 aaKnown RBP11.4□□□□□ -0.58
RPT5YOR117W YFR016CP43597 1233 aaKnown RBP11.4□□□□□ -0.58
RPT5YOR117W LYS4P49367 693 aaPredicted RBP11.4□□□□□ -0.58
RPT5YOR117W LYS2P07702 1392 aa11.39□□□□□ -0.59
RPT5YOR117W COQ4O13525 335 aa11.38□□□□□ -0.59
RPT5YOR117W TUM1Q08686 304 aaKnown RBP11.38□□□□□ -0.59
RPT5YOR117W RAD4P14736 754 aa11.37□□□□□ -0.59
RPT5YOR117W SIS1P25294 352 aaKnown RBP11.37□□□□□ -0.59
RPT5YOR117W YBR287WP38355 427 aa11.37□□□□□ -0.59
RPT5YOR117W GTT3P39996 337 aa11.36□□□□□ -0.59
RPT5YOR117W ALD2P47771 506 aa11.36□□□□□ -0.59
RPT5YOR117W NOP53Q12080 455 aaKnown RBP11.36□□□□□ -0.59
RPT5YOR117W MDG1P53885 366 aa11.35□□□□□ -0.59
RPT5YOR117W NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.35□□□□□ -0.59not detected
RPT5YOR117W GRE2Q12068 342 aaKnown RBP11.35□□□□□ -0.59
RPT5YOR117W AVT3P36062 692 aa11.35□□□□□ -0.59
RPT5YOR117W SRT1Q03175 343 aa11.35□□□□□ -0.59
RPT5YOR117W MAK21Q12176 1025 aaKnown RBP11.35□□□□□ -0.59
RPT5YOR117W YBL086CP38177 466 aa11.34□□□□□ -0.59
RPT5YOR117W YOL057WQ08225 711 aa11.34□□□□□ -0.59
RPT5YOR117W SSP2Q08646 371 aa11.34□□□□□ -0.59
RPT5YOR117W BDF1P35817 686 aa11.33□□□□□ -0.6
RPT5YOR117W UGA2P38067 497 aa11.33□□□□□ -0.6
RPT5YOR117W BUG1Q12191 341 aa11.33□□□□□ -0.6
RPT5YOR117W CTH1P47976 325 aa11.32□□□□□ -0.6
RPT5YOR117W PHM7Q12252 991 aa11.32□□□□□ -0.6
RPT5YOR117W RIM15P43565 1770 aa11.31□□□□□ -0.6
RPT5YOR117W SSA2P10592 639 aaKnown RBP11.3□□□□□ -0.6
RPT5YOR117W BUD27P43573 796 aaKnown RBP RIP-Chip data11.29□□□□□ -0.6not detected
RPT5YOR117W TEA1P47988 759 aa11.29□□□□□ -0.6
RPT5YOR117W RAD2P07276 1031 aa11.28□□□□□ -0.6
RPT5YOR117W UBP9P39967 754 aa11.28□□□□□ -0.6
RPT5YOR117W UTP22P53254 1237 aaPredicted RBP11.28□□□□□ -0.6
RPT5YOR117W ALD3P54114 506 aa11.28□□□□□ -0.6
RPT5YOR117W ZDS2P54786 942 aa11.28□□□□□ -0.6
RPT5YOR117W DNM1P54861 757 aa11.28□□□□□ -0.6
RPT5YOR117W NYV1Q12255 253 aa11.28□□□□□ -0.6
RPT5YOR117W YIL092WP40497 633 aa11.27□□□□□ -0.61
RPT5YOR117W DAL5P15365 543 aa11.26□□□□□ -0.61
RPT5YOR117W SER1P33330 395 aaKnown RBP11.26□□□□□ -0.61
RPT5YOR117W FUN12P39730 1002 aaKnown RBP11.25□□□□□ -0.61
RPT5YOR117W VPS64Q03944 604 aa11.25□□□□□ -0.61
RPT5YOR117W YDR306CQ06640 478 aa11.25□□□□□ -0.61
RPT5YOR117W MRP7P12687 371 aa11.24□□□□□ -0.61
RPT5YOR117W YPP1P46951 817 aa11.24□□□□□ -0.61
RPT5YOR117W ARG8P18544 423 aa11.23□□□□□ -0.61
RPT5YOR117W APL2P36000 726 aaPredicted RBP11.23□□□□□ -0.61
RPT5YOR117W CST6P40535 587 aa11.23□□□□□ -0.61
RPT5YOR117W YGL082WP53155 381 aa11.23□□□□□ -0.61
RPT5YOR117W NOP8Q08287 484 aaPredicted RBP11.23□□□□□ -0.61
RPT5YOR117W YPR204WQ08995 1032 aa11.23□□□□□ -0.61
RPT5YOR117W SPT21P35209 758 aa11.22□□□□□ -0.61
RPT5YOR117W TIF4632P39936 914 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms