RNA–Protein interactions for RNA: YNL187W

SWT21, Transcript of Protein involved in mRNA splicing, yeastyeast

Gene SWT21, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT21YNL187W YRF1-3P0CX14 1859 aa10.68□□□□□ -0.7
SWT21YNL187W YRF1-7P0CX15 1859 aa10.68□□□□□ -0.7
SWT21YNL187W YRF1-6P53819 1859 aa10.68□□□□□ -0.7
SWT21YNL187W SIR4P11978 1358 aa10.68□□□□□ -0.7
SWT21YNL187W CDC27P38042 758 aa10.68□□□□□ -0.7
SWT21YNL187W IES2P40154 320 aa10.68□□□□□ -0.7
SWT21YNL187W YBR287WP38355 427 aa10.66□□□□□ -0.7
SWT21YNL187W YRB30P53107 440 aaPredicted RBP10.66□□□□□ -0.7
SWT21YNL187W YNL050CP53952 270 aa10.66□□□□□ -0.7
SWT21YNL187W NAB6Q03735 1134 aaKnown RBP RIP-Chip data10.66□□□□□ -0.7not detected
SWT21YNL187W AOS1Q06624 347 aa10.66□□□□□ -0.7
SWT21YNL187W DAL5P15365 543 aa10.65□□□□□ -0.7
SWT21YNL187W RRT14P40470 206 aa10.65□□□□□ -0.7
SWT21YNL187W IMH1Q06704 911 aaKnown RBP10.64□□□□□ -0.71
SWT21YNL187W ZDS1P50111 915 aaKnown RBP10.63□□□□□ -0.71
SWT21YNL187W INP54Q08227 384 aaKnown RBP10.63□□□□□ -0.71
SWT21YNL187W GYP7P48365 746 aa10.62□□□□□ -0.71
SWT21YNL187W NUP145P49687 1317 aa10.61□□□□□ -0.71
SWT21YNL187W RAD2P07276 1031 aa10.61□□□□□ -0.71
SWT21YNL187W YKL133CP36066 463 aa10.61□□□□□ -0.71
SWT21YNL187W YIL092WP40497 633 aa10.61□□□□□ -0.71
SWT21YNL187W ADE16P54113 591 aaKnown RBP10.61□□□□□ -0.71
SWT21YNL187W CTF4Q01454 927 aa10.61□□□□□ -0.71
SWT21YNL187W MAM1P40065 302 aa10.6□□□□□ -0.71
SWT21YNL187W FRK1Q03002 865 aaPredicted RBP10.6□□□□□ -0.71
SWT21YNL187W COQ4O13525 335 aa10.59□□□□□ -0.71
SWT21YNL187W BMS1Q08965 1183 aaKnown RBP10.59□□□□□ -0.71
SWT21YNL187W MEC3Q02574 474 aa10.58□□□□□ -0.72
SWT21YNL187W SRT1Q03175 343 aa10.58□□□□□ -0.72
SWT21YNL187W MAK21Q12176 1025 aaKnown RBP10.58□□□□□ -0.72
SWT21YNL187W KCC4P25389 1037 aa10.57□□□□□ -0.72
SWT21YNL187W TFA1P36100 482 aa10.57□□□□□ -0.72
SWT21YNL187W FPR3P38911 411 aaKnown RBP10.57□□□□□ -0.72
SWT21YNL187W ALE1Q08548 619 aa10.56□□□□□ -0.72
SWT21YNL187W ROM2P51862 1356 aaKnown RBP10.55□□□□□ -0.72
SWT21YNL187W OSM1P21375 501 aaKnown RBP10.55□□□□□ -0.72
SWT21YNL187W UGA3P26370 528 aa10.55□□□□□ -0.72
SWT21YNL187W NSE3Q05541 303 aa10.55□□□□□ -0.72
SWT21YNL187W EDE1P34216 1381 aa10.54□□□□□ -0.72
SWT21YNL187W YIL055CP40523 627 aaKnown RBP10.54□□□□□ -0.72
SWT21YNL187W DOT5P40553 215 aa10.54□□□□□ -0.72
SWT21YNL187W BUD27P43573 796 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
SWT21YNL187W ATG13Q06628 738 aa10.54□□□□□ -0.72
SWT21YNL187W FOX2Q02207 900 aaKnown RBP10.53□□□□□ -0.72
SWT21YNL187W COBP00163 385 aa10.52□□□□□ -0.73
SWT21YNL187W POL32P47110 350 aa10.52□□□□□ -0.73
SWT21YNL187W RIM15P43565 1770 aa10.52□□□□□ -0.73
SWT21YNL187W TRP5P00931 707 aaKnown RBP10.51□□□□□ -0.73
SWT21YNL187W RAD4P14736 754 aa10.51□□□□□ -0.73
SWT21YNL187W LYS2P07702 1392 aa10.51□□□□□ -0.73
SWT21YNL187W YBP2P53169 641 aa10.5□□□□□ -0.73
SWT21YNL187W PUF6Q04373 656 aaKnown RBP10.5□□□□□ -0.73
SWT21YNL187W YPP1P46951 817 aa10.49□□□□□ -0.73
SWT21YNL187W ZDS2P54786 942 aa10.49□□□□□ -0.73
SWT21YNL187W CSI1Q04368 295 aa10.49□□□□□ -0.73
SWT21YNL187W YGR122WP53272 402 aa10.48□□□□□ -0.73
SWT21YNL187W YOL057WQ08225 711 aa10.48□□□□□ -0.73
SWT21YNL187W YKR075CP36155 307 aa10.47□□□□□ -0.73
SWT21YNL187W RMT2Q03305 412 aa10.47□□□□□ -0.73
SWT21YNL187W RAD24P32641 659 aa10.46□□□□□ -0.73
SWT21YNL187W YKR023WP36119 530 aaKnown RBP10.46□□□□□ -0.73
SWT21YNL187W ILV3P39522 585 aaKnown RBP10.46□□□□□ -0.73
SWT21YNL187W MRP7P12687 371 aa10.45□□□□□ -0.74
SWT21YNL187W BUD31P25337 157 aaPredicted RBP10.44□□□□□ -0.74
SWT21YNL187W RPN11P43588 306 aaKnown RBP10.44□□□□□ -0.74
SWT21YNL187W NOP8Q08287 484 aaPredicted RBP10.44□□□□□ -0.74
SWT21YNL187W TUM1Q08686 304 aaKnown RBP10.44□□□□□ -0.74
SWT21YNL187W RPC31P17890 251 aa10.43□□□□□ -0.74
SWT21YNL187W SWC3P31376 625 aa10.43□□□□□ -0.74
SWT21YNL187W VPS64Q03944 604 aa10.43□□□□□ -0.74
SWT21YNL187W LAM6Q08001 693 aa10.43□□□□□ -0.74
SWT21YNL187W NOP53Q12080 455 aaKnown RBP10.43□□□□□ -0.74
SWT21YNL187W YNG2P38806 282 aaKnown RBP10.42□□□□□ -0.74
SWT21YNL187W SPO1P53541 631 aa10.42□□□□□ -0.74
SWT21YNL187W YDR306CQ06640 478 aa10.42□□□□□ -0.74
SWT21YNL187W MAP2P38174 421 aaKnown RBP10.41□□□□□ -0.74
SWT21YNL187W YFR016CP43597 1233 aaKnown RBP10.41□□□□□ -0.74
SWT21YNL187W SWI1P09547 1314 aa10.4□□□□□ -0.74
SWT21YNL187W RPS19AP07280 144 aaKnown RBP10.4□□□□□ -0.74
SWT21YNL187W RPS19BP07281 144 aaPredicted RBP10.4□□□□□ -0.74
SWT21YNL187W GRX1P25373 110 aaKnown RBP10.4□□□□□ -0.74
SWT21YNL187W PRP40P33203 583 aaKnown RBP10.4□□□□□ -0.74
SWT21YNL187W APL2P36000 726 aaPredicted RBP10.4□□□□□ -0.74
SWT21YNL187W NUP133P36161 1157 aa10.4□□□□□ -0.74
SWT21YNL187W SPT21P35209 758 aa10.39□□□□□ -0.75
SWT21YNL187W YMR074CQ04773 145 aa10.39□□□□□ -0.75
SWT21YNL187W YJL181WP46987 611 aa10.38□□□□□ -0.75
SWT21YNL187W SSP2Q08646 371 aa10.38□□□□□ -0.75
SWT21YNL187W GLN1P32288 370 aaKnown RBP10.37□□□□□ -0.75
SWT21YNL187W BOI2P39969 1040 aa10.37□□□□□ -0.75
SWT21YNL187W CST6P40535 587 aa10.37□□□□□ -0.75
SWT21YNL187W DNM1P54861 757 aa10.37□□□□□ -0.75
SWT21YNL187W NPR2P39923 615 aa10.36□□□□□ -0.75
SWT21YNL187W UBP10P53874 792 aaPredicted RBP10.36□□□□□ -0.75
SWT21YNL187W NMD2P38798 1089 aaKnown RBP10.35□□□□□ -0.75
SWT21YNL187W TEA1P47988 759 aa10.34□□□□□ -0.75
SWT21YNL187W YPR204WQ08995 1032 aa10.34□□□□□ -0.75
SWT21YNL187W MSB4Q12317 492 aa10.34□□□□□ -0.75
SWT21YNL187W ARG8P18544 423 aa10.33□□□□□ -0.76
SWT21YNL187W YGL082WP53155 381 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms