RNA–Protein interactions for RNA: YJL124C

LSM1, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM1, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM1YJL124C MMP1Q12372 583 aa4.47□□□□□ -1.69
LSM1YJL124C TRM1P15565 570 aaKnown RBP4.46□□□□□ -1.7
LSM1YJL124C ESS1P22696 170 aa4.46□□□□□ -1.7
LSM1YJL124C KTR1P27810 393 aaKnown RBP4.46□□□□□ -1.7
LSM1YJL124C HEM3P28789 327 aa4.46□□□□□ -1.7
LSM1YJL124C TPD3P31383 635 aa4.46□□□□□ -1.7
LSM1YJL124C HXT10P43581 546 aa4.46□□□□□ -1.7
LSM1YJL124C OSW7P43611 510 aa4.46□□□□□ -1.7
LSM1YJL124C KXD1P53158 218 aa4.46□□□□□ -1.7
LSM1YJL124C HPC2Q01448 625 aa4.46□□□□□ -1.7
LSM1YJL124C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
LSM1YJL124C YJR008WP47085 338 aa4.45□□□□□ -1.7
LSM1YJL124C SSA4P22202 642 aaKnown RBP4.44□□□□□ -1.7
LSM1YJL124C YJU3P28321 313 aa4.44□□□□□ -1.7
LSM1YJL124C KRI1P42846 591 aaKnown RBP4.44□□□□□ -1.7
LSM1YJL124C RPA14P50106 137 aa4.44□□□□□ -1.7
LSM1YJL124C MET32Q12041 191 aa4.44□□□□□ -1.7
LSM1YJL124C YDL206WQ12424 762 aa4.44□□□□□ -1.7
LSM1YJL124C OCA5P38738 679 aa4.43□□□□□ -1.7
LSM1YJL124C SSF1P38789 453 aaPredicted RBP4.43□□□□□ -1.7
LSM1YJL124C RRD1P40454 393 aaKnown RBP4.43□□□□□ -1.7
LSM1YJL124C BRE2P43132 505 aa4.43□□□□□ -1.7
LSM1YJL124C YFR016CP43597 1233 aaKnown RBP4.43□□□□□ -1.7
LSM1YJL124C TPO2P53283 614 aa4.43□□□□□ -1.7
LSM1YJL124C YPR097WQ06839 1073 aa4.43□□□□□ -1.7
LSM1YJL124C ALR1Q08269 859 aa4.43□□□□□ -1.7
LSM1YJL124C RSC30P38781 883 aa4.42□□□□□ -1.7
LSM1YJL124C NAB3P38996 802 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
LSM1YJL124C YAF9P53930 226 aa4.42□□□□□ -1.7
LSM1YJL124C TBF1Q02457 562 aa4.42□□□□□ -1.7
LSM1YJL124C TFB3Q03290 321 aa4.42□□□□□ -1.7
LSM1YJL124C FPR4Q06205 392 aaPredicted RBP4.42□□□□□ -1.7
LSM1YJL124C ASH1P34233 588 aa4.41□□□□□ -1.7
LSM1YJL124C CSN12P47130 423 aa4.41□□□□□ -1.7
LSM1YJL124C CDC3P32457 520 aaKnown RBP4.4□□□□□ -1.71
LSM1YJL124C NMD2P38798 1089 aaKnown RBP4.4□□□□□ -1.71
LSM1YJL124C GCR2Q01722 534 aa4.4□□□□□ -1.71
LSM1YJL124C SEN54Q02825 467 aaPredicted RBP4.4□□□□□ -1.71
LSM1YJL124C PKH3Q03306 898 aaPredicted RBP4.4□□□□□ -1.71
LSM1YJL124C AFT1P22149 690 aa4.39□□□□□ -1.71
LSM1YJL124C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
LSM1YJL124C RPL34AP87262 121 aaPredicted RBP4.39□□□□□ -1.71
LSM1YJL124C SYH1Q02875 849 aaKnown RBP4.39□□□□□ -1.71
LSM1YJL124C ITT1Q04638 464 aa4.39□□□□□ -1.71
LSM1YJL124C BUD21Q08492 214 aaPredicted RBP4.39□□□□□ -1.71
LSM1YJL124C SIS2P36024 562 aa4.38□□□□□ -1.71
LSM1YJL124C ARG8P18544 423 aa4.37□□□□□ -1.71
LSM1YJL124C ALD4P46367 519 aaKnown RBP4.37□□□□□ -1.71
LSM1YJL124C NNF1P47149 201 aa4.37□□□□□ -1.71
LSM1YJL124C HST3P53687 447 aa4.37□□□□□ -1.71
LSM1YJL124C PKC1P24583 1151 aa4.36□□□□□ -1.71
LSM1YJL124C KIP2P28743 706 aa4.36□□□□□ -1.71
LSM1YJL124C IXR1P33417 597 aa4.36□□□□□ -1.71
LSM1YJL124C TOM20P35180 183 aa4.36□□□□□ -1.71
LSM1YJL124C BIM1P40013 344 aa4.36□□□□□ -1.71
LSM1YJL124C RPS0BP46654 252 aaKnown RBP4.36□□□□□ -1.71
LSM1YJL124C UBX5Q06682 500 aa4.36□□□□□ -1.71
LSM1YJL124C RAD59Q12223 238 aa4.36□□□□□ -1.71
LSM1YJL124C VAC17P25591 423 aa4.35□□□□□ -1.71
LSM1YJL124C MET22P32179 357 aa4.35□□□□□ -1.71
LSM1YJL124C ATG32P40458 529 aa4.35□□□□□ -1.71
LSM1YJL124C YJR115WP47152 169 aa4.35□□□□□ -1.71
LSM1YJL124C YJL007CP47080 104 aa4.34□□□□□ -1.71
LSM1YJL124C CPS1P27614 576 aa4.33□□□□□ -1.72
LSM1YJL124C GAR1P28007 205 aaKnown RBP4.33□□□□□ -1.72
LSM1YJL124C TOA1P32773 286 aa4.33□□□□□ -1.72
LSM1YJL124C MRT4P33201 236 aaKnown RBP4.33□□□□□ -1.72
LSM1YJL124C RGA1P39083 1007 aa4.33□□□□□ -1.72
LSM1YJL124C ZDS1P50111 915 aaKnown RBP4.33□□□□□ -1.72
LSM1YJL124C SSA2P10592 639 aaKnown RBP4.32□□□□□ -1.72
LSM1YJL124C RRP14P36080 434 aaKnown RBP4.32□□□□□ -1.72
LSM1YJL124C RPL34BP40525 121 aaKnown RBP4.32□□□□□ -1.72
LSM1YJL124C MSB3P48566 633 aaPredicted RBP4.32□□□□□ -1.72
LSM1YJL124C ENV9Q08651 330 aa4.32□□□□□ -1.72
LSM1YJL124C HAT1Q12341 374 aa4.32□□□□□ -1.72
LSM1YJL124C FIG4P42837 879 aa4.31□□□□□ -1.72
LSM1YJL124C KIP3P53086 805 aaKnown RBP4.31□□□□□ -1.72
LSM1YJL124C RNH70P53331 553 aa4.31□□□□□ -1.72
LSM1YJL124C NOB1Q08444 459 aaKnown RBP4.31□□□□□ -1.72
LSM1YJL124C UGA3P26370 528 aa4.3□□□□□ -1.72
LSM1YJL124C TTI1P36097 1038 aa4.3□□□□□ -1.72
LSM1YJL124C FPR3P38911 411 aaKnown RBP4.3□□□□□ -1.72
LSM1YJL124C STM1P39015 273 aaKnown RBP4.3□□□□□ -1.72
LSM1YJL124C YDR444WQ04093 687 aa4.3□□□□□ -1.72
LSM1YJL124C HIF1Q12373 385 aa4.3□□□□□ -1.72
LSM1YJL124C TIF1P10081 395 aaKnown RBP4.29□□□□□ -1.72
LSM1YJL124C TY4A-JP47023 414 aa4.29□□□□□ -1.72
LSM1YJL124C PTK2P47116 818 aaKnown RBP4.29□□□□□ -1.72
LSM1YJL124C ALD2P47771 506 aa4.29□□□□□ -1.72
LSM1YJL124C APP1P53933 587 aa4.29□□□□□ -1.72
LSM1YJL124C YPL062WQ02781 134 aa4.29□□□□□ -1.72
LSM1YJL124C SVF1Q05515 481 aa4.29□□□□□ -1.72
LSM1YJL124C MAK16P10962 306 aaPredicted RBP4.28□□□□□ -1.72
LSM1YJL124C TSR4P25040 408 aa4.28□□□□□ -1.72
LSM1YJL124C PPG1P32838 368 aa4.28□□□□□ -1.72
LSM1YJL124C PMC1P38929 1173 aaPredicted RBP4.28□□□□□ -1.72
LSM1YJL124C IPL1P38991 367 aa4.28□□□□□ -1.72
LSM1YJL124C TPM2P40414 161 aa4.28□□□□□ -1.72
LSM1YJL124C NOP2P40991 618 aaKnown RBP4.28□□□□□ -1.72
LSM1YJL124C LCB5Q06147 687 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 146.2 ms