RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W SNQ2P32568 1501 aaKnown RBP4.83□□□□□ -1.64
BCD1YHR040W SPP41P38904 1435 aa4.83□□□□□ -1.64
BCD1YHR040W TFB3Q03290 321 aa4.83□□□□□ -1.64
BCD1YHR040W ERG12P07277 443 aa4.82□□□□□ -1.64
BCD1YHR040W LAM6Q08001 693 aa4.82□□□□□ -1.64
BCD1YHR040W AIM44Q99299 758 aa4.82□□□□□ -1.64
BCD1YHR040W TRM1P15565 570 aaKnown RBP4.81□□□□□ -1.64
BCD1YHR040W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
BCD1YHR040W RAD59Q12223 238 aa4.81□□□□□ -1.64
BCD1YHR040W TSC11P40061 1430 aa4.8□□□□□ -1.64
BCD1YHR040W DNF1P32660 1571 aa4.8□□□□□ -1.64
BCD1YHR040W PAC1P39946 494 aaKnown RBP4.8□□□□□ -1.64
BCD1YHR040W KXD1P53158 218 aa4.8□□□□□ -1.64
BCD1YHR040W AGE1Q04412 482 aa4.8□□□□□ -1.64
BCD1YHR040W RTT106P40161 455 aa4.79□□□□□ -1.64
BCD1YHR040W YDL206WQ12424 762 aa4.79□□□□□ -1.64
BCD1YHR040W YEL077CQ3E7X8 1277 aa4.79□□□□□ -1.64
BCD1YHR040W LTE1P07866 1435 aa4.79□□□□□ -1.64
BCD1YHR040W TRM732Q03496 1420 aa4.79□□□□□ -1.64
BCD1YHR040W PAN1P32521 1480 aa4.78□□□□□ -1.64
BCD1YHR040W YBL036CP38197 257 aa4.78□□□□□ -1.64
BCD1YHR040W ALR1Q08269 859 aa4.78□□□□□ -1.64
BCD1YHR040W BNI1P41832 1953 aa4.78□□□□□ -1.64
BCD1YHR040W PKC1P24583 1151 aa4.77□□□□□ -1.65
BCD1YHR040W RSC30P38781 883 aa4.77□□□□□ -1.65
BCD1YHR040W RPA14P50106 137 aa4.77□□□□□ -1.65
BCD1YHR040W ITT1Q04638 464 aa4.77□□□□□ -1.65
BCD1YHR040W GEA1P47102 1408 aaPredicted RBP4.77□□□□□ -1.65
BCD1YHR040W VTH1P40438 1549 aa4.77□□□□□ -1.65
BCD1YHR040W VTH2P40890 1549 aa4.77□□□□□ -1.65
BCD1YHR040W CDC25P04821 1589 aa4.76□□□□□ -1.65
BCD1YHR040W PDR15Q04182 1529 aaKnown RBP4.76□□□□□ -1.65
BCD1YHR040W DPS1P04802 557 aaKnown RBP4.75□□□□□ -1.65
BCD1YHR040W CSE4P36012 229 aa4.75□□□□□ -1.65
BCD1YHR040W YJL007CP47080 104 aa4.75□□□□□ -1.65
BCD1YHR040W FRK1Q03002 865 aaPredicted RBP4.75□□□□□ -1.65
BCD1YHR040W YPR097WQ06839 1073 aa4.75□□□□□ -1.65
BCD1YHR040W IRC20Q06554 1556 aa4.74□□□□□ -1.65
BCD1YHR040W CAT8P39113 1433 aa4.74□□□□□ -1.65
BCD1YHR040W SNT2P53127 1403 aa4.74□□□□□ -1.65
BCD1YHR040W MMS1Q06211 1407 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-LR1P0C2J3 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-FP0CX63 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-GR2P0CX64 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-CP25384 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-DR2Q03494 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY1B-DR1Q03855 1755 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-DR3Q07791 1770 aaKnown RBP4.74□□□□□ -1.65
BCD1YHR040W TY2B-OR1Q12113 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-DR1Q12472 1770 aa4.74□□□□□ -1.65
BCD1YHR040W TY2B-OR2Q12501 1770 aa4.74□□□□□ -1.65
BCD1YHR040W PDC1P06169 563 aaKnown RBP4.74□□□□□ -1.65
BCD1YHR040W SDH2P21801 266 aa4.74□□□□□ -1.65
BCD1YHR040W AMS1P22855 1083 aa4.74□□□□□ -1.65
BCD1YHR040W HXT10P43581 546 aa4.74□□□□□ -1.65
BCD1YHR040W GEA2P39993 1459 aaKnown RBP4.74□□□□□ -1.65
BCD1YHR040W BDP1P46678 594 aa4.73□□□□□ -1.65
BCD1YHR040W YML020WQ03722 664 aa4.73□□□□□ -1.65
BCD1YHR040W NOP8Q08287 484 aaPredicted RBP4.73□□□□□ -1.65
BCD1YHR040W NUP170P38181 1502 aa4.72□□□□□ -1.65
BCD1YHR040W MAK16P10962 306 aaPredicted RBP4.72□□□□□ -1.65
BCD1YHR040W CST6P40535 587 aa4.72□□□□□ -1.65
BCD1YHR040W SRC1Q03707 834 aa4.72□□□□□ -1.65
BCD1YHR040W MLP2P40457 1679 aa4.72□□□□□ -1.65
BCD1YHR040W TY1B-DR3Q99231 1755 aa4.72□□□□□ -1.65
BCD1YHR040W RAS1P01119 309 aa4.71□□□□□ -1.66
BCD1YHR040W MOD5P07884 428 aa4.71□□□□□ -1.66
BCD1YHR040W RRD1P40454 393 aaKnown RBP4.71□□□□□ -1.66
BCD1YHR040W TY2B-BQ12491 1770 aa4.7□□□□□ -1.66
BCD1YHR040W RPA190P10964 1664 aaKnown RBP4.7□□□□□ -1.66
BCD1YHR040W KIP2P28743 706 aa4.7□□□□□ -1.66
BCD1YHR040W TPD3P31383 635 aa4.7□□□□□ -1.66
BCD1YHR040W RPL34BP40525 121 aaKnown RBP4.7□□□□□ -1.66
BCD1YHR040W ORC1P54784 914 aaPredicted RBP4.7□□□□□ -1.66
BCD1YHR040W PUS5Q06244 254 aa4.7□□□□□ -1.66
BCD1YHR040W SSA1P10591 642 aaKnown RBP4.69□□□□□ -1.66
BCD1YHR040W NAP1P25293 417 aaKnown RBP4.69□□□□□ -1.66
BCD1YHR040W SPT5P27692 1063 aaKnown RBP4.69□□□□□ -1.66
BCD1YHR040W MET10P39692 1035 aa4.69□□□□□ -1.66
BCD1YHR040W BIM1P40013 344 aa4.69□□□□□ -1.66
BCD1YHR040W YNL108CP53929 270 aa4.69□□□□□ -1.66
BCD1YHR040W ULS1Q08562 1619 aa4.68□□□□□ -1.66
BCD1YHR040W TEC1P18412 486 aa4.68□□□□□ -1.66
BCD1YHR040W GEF1P37020 779 aa4.68□□□□□ -1.66
BCD1YHR040W NAF1P53919 492 aaKnown RBP4.68□□□□□ -1.66
BCD1YHR040W SYH1Q02875 849 aaKnown RBP4.68□□□□□ -1.66
BCD1YHR040W SSM4P40318 1319 aa4.68□□□□□ -1.66
BCD1YHR040W VPS15P22219 1454 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-HO13535 1793 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-DR5P0C2I2 1755 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-DR6P0C2I3 1755 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-LR2P0C2I5 1755 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-LR3P0C2I6 1755 aaKnown RBP4.68□□□□□ -1.66
BCD1YHR040W TY1B-PR1P0C2I9 1755 aaKnown RBP4.68□□□□□ -1.66
BCD1YHR040W TY1B-PR2P0C2J0 1756 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-PR3P0C2J1 1755 aaKnown RBP4.68□□□□□ -1.66
BCD1YHR040W TY1B-JR1P47098 1755 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-ML2Q03434 1755 aaKnown RBP4.68□□□□□ -1.66
BCD1YHR040W TY1B-ER1Q03612 1755 aa4.68□□□□□ -1.66
BCD1YHR040W TY1B-ML1Q04711 1755 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms