RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C NMA111P53920 997 aa9.87□□□□□ -0.83
NUP57YGR119C YDL129WQ07555 291 aa9.87□□□□□ -0.83
NUP57YGR119C IRC20Q06554 1556 aa9.86□□□□□ -0.83
NUP57YGR119C MMS1Q06211 1407 aa9.86□□□□□ -0.83
NUP57YGR119C SCJ1P25303 377 aa9.86□□□□□ -0.83
NUP57YGR119C MMP1Q12372 583 aa9.86□□□□□ -0.83
NUP57YGR119C DRS2P39524 1355 aa9.86□□□□□ -0.83
NUP57YGR119C ESS1P22696 170 aa9.85□□□□□ -0.83
NUP57YGR119C SIT4P20604 311 aa9.84□□□□□ -0.83
NUP57YGR119C PKH3Q03306 898 aaPredicted RBP9.84□□□□□ -0.83
NUP57YGR119C FKH1P40466 484 aa9.83□□□□□ -0.84
NUP57YGR119C CAT8P39113 1433 aa9.82□□□□□ -0.84
NUP57YGR119C YJL007CP47080 104 aa9.82□□□□□ -0.84
NUP57YGR119C YJU3P28321 313 aa9.8□□□□□ -0.84
NUP57YGR119C SAP30P38429 201 aa9.79□□□□□ -0.84
NUP57YGR119C POL5P39985 1022 aaKnown RBP9.79□□□□□ -0.84
NUP57YGR119C RAD59Q12223 238 aa9.79□□□□□ -0.84
NUP57YGR119C BIM1P40013 344 aa9.78□□□□□ -0.84
NUP57YGR119C NUD1P32336 851 aa9.78□□□□□ -0.84
NUP57YGR119C NOP2P40991 618 aaKnown RBP9.78□□□□□ -0.84
NUP57YGR119C YDR344CQ05510 147 aa9.78□□□□□ -0.84
NUP57YGR119C PDR1P12383 1068 aa9.77□□□□□ -0.85
NUP57YGR119C YBL036CP38197 257 aa9.77□□□□□ -0.85
NUP57YGR119C HAP5Q02516 242 aa9.77□□□□□ -0.85
NUP57YGR119C SLY41P22215 453 aa9.76□□□□□ -0.85
NUP57YGR119C RTT106P40161 455 aa9.76□□□□□ -0.85
NUP57YGR119C ATG32P40458 529 aa9.75□□□□□ -0.85
NUP57YGR119C PDR10P51533 1564 aa9.75□□□□□ -0.85
NUP57YGR119C KEX2P13134 814 aa9.74□□□□□ -0.85
NUP57YGR119C ARG8P18544 423 aa9.74□□□□□ -0.85
NUP57YGR119C ARH1P48360 493 aa9.74□□□□□ -0.85
NUP57YGR119C RTF1P53064 558 aa9.74□□□□□ -0.85
NUP57YGR119C YNL115CP53925 644 aa9.74□□□□□ -0.85
NUP57YGR119C ARO1P08566 1588 aaKnown RBP9.73□□□□□ -0.85
NUP57YGR119C SRB8P25648 1427 aa9.73□□□□□ -0.85
NUP57YGR119C BIO2P32451 375 aa9.73□□□□□ -0.85
NUP57YGR119C AIR2Q12476 344 aaKnown RBP9.73□□□□□ -0.85
NUP57YGR119C GDB1Q06625 1536 aa9.73□□□□□ -0.85
NUP57YGR119C DNF2Q12675 1612 aa9.73□□□□□ -0.85
NUP57YGR119C SPO14P36126 1683 aa9.72□□□□□ -0.85
NUP57YGR119C ERF2Q06551 359 aa9.71□□□□□ -0.85
NUP57YGR119C GCN2P15442 1659 aa9.7□□□□□ -0.86
NUP57YGR119C NPL4P33755 580 aa9.7□□□□□ -0.86
NUP57YGR119C ENP1P38333 483 aaKnown RBP9.7□□□□□ -0.86
NUP57YGR119C STR2P47164 639 aa9.7□□□□□ -0.86
NUP57YGR119C MET10P39692 1035 aa9.69□□□□□ -0.86
NUP57YGR119C ISM1P48526 1002 aa9.68□□□□□ -0.86
NUP57YGR119C TIF1P10081 395 aaKnown RBP9.67□□□□□ -0.86
NUP57YGR119C RSC30P38781 883 aa9.67□□□□□ -0.86
NUP57YGR119C RPL34BP40525 121 aaKnown RBP9.67□□□□□ -0.86
NUP57YGR119C ELP4Q02884 456 aaKnown RBP9.67□□□□□ -0.86
NUP57YGR119C BNI4P53858 892 aa9.67□□□□□ -0.86
NUP57YGR119C LAM6Q08001 693 aa9.67□□□□□ -0.86
NUP57YGR119C TRM1P15565 570 aaKnown RBP9.66□□□□□ -0.86
NUP57YGR119C CSE4P36012 229 aa9.66□□□□□ -0.86
NUP57YGR119C SEC3P33332 1336 aaKnown RBP9.66□□□□□ -0.86
NUP57YGR119C PDR12Q02785 1511 aa9.66□□□□□ -0.86
NUP57YGR119C ERG12P07277 443 aa9.65□□□□□ -0.86
NUP57YGR119C YNL108CP53929 270 aa9.64□□□□□ -0.87
NUP57YGR119C RAM1P22007 431 aa9.63□□□□□ -0.87
NUP57YGR119C DOP1Q03921 1698 aa9.62□□□□□ -0.87
NUP57YGR119C SPT7P35177 1332 aa9.62□□□□□ -0.87
NUP57YGR119C PDR5P33302 1511 aaKnown RBP9.62□□□□□ -0.87
NUP57YGR119C TY1A-DR4O74302 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-HP0C2I4 478 aaKnown RBP9.61□□□□□ -0.87
NUP57YGR119C TY1A-AP0CX57 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-PR1P0CX58 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-ORP0CX59 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-PR2P0CX60 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-DR5P0CX65 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-ER2P0CX66 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-GR3P0CX67 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-LR1P0CX68 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-MR2P0CX69 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-JR2P47099 440 aa9.61□□□□□ -0.87
NUP57YGR119C PUS6P53294 404 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-DR1Q03856 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-ML1Q04706 440 aaKnown RBP9.61□□□□□ -0.87
NUP57YGR119C TY1A-BRQ12217 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-NL2Q12470 440 aa9.61□□□□□ -0.87
NUP57YGR119C TY1A-GR2Q12485 440 aa9.61□□□□□ -0.87
NUP57YGR119C MAK16P10962 306 aaPredicted RBP9.6□□□□□ -0.87
NUP57YGR119C GCD11P32481 527 aaKnown RBP9.6□□□□□ -0.87
NUP57YGR119C SPT23P35210 1082 aa9.6□□□□□ -0.87
NUP57YGR119C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
NUP57YGR119C TBF1Q02457 562 aa9.6□□□□□ -0.87
NUP57YGR119C SEC2P17065 759 aa9.59□□□□□ -0.87
NUP57YGR119C RTG2P32608 588 aaKnown RBP9.59□□□□□ -0.87
NUP57YGR119C PTC2P39966 464 aaKnown RBP9.59□□□□□ -0.87
NUP57YGR119C BUD20Q08004 166 aaPredicted RBP9.59□□□□□ -0.87
NUP57YGR119C YPR204WQ08995 1032 aa9.59□□□□□ -0.87
NUP57YGR119C YPR015CQ12531 247 aa9.59□□□□□ -0.87
NUP57YGR119C IQG1Q12280 1495 aa9.58□□□□□ -0.88
NUP57YGR119C AGE1Q04412 482 aa9.58□□□□□ -0.88
NUP57YGR119C BMT6Q12291 365 aa9.58□□□□□ -0.88
NUP57YGR119C NUP157P40064 1391 aaKnown RBP9.57□□□□□ -0.88
NUP57YGR119C YDJ1P25491 409 aaKnown RBP9.57□□□□□ -0.88
NUP57YGR119C TUB4P53378 473 aa9.57□□□□□ -0.88
NUP57YGR119C TRM3Q07527 1436 aa9.57□□□□□ -0.88
NUP57YGR119C SPT5P27692 1063 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms