RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C NAP1P25293 417 aaKnown RBP7.47□□□□□ -1.21
RPT6YGL048C YJL171CP46992 396 aa7.46□□□□□ -1.22
RPT6YGL048C DAN4P47179 1161 aa7.46□□□□□ -1.22
RPT6YGL048C YGR273CP53329 174 aa7.46□□□□□ -1.22
RPT6YGL048C AIR2Q12476 344 aaKnown RBP7.46□□□□□ -1.22
RPT6YGL048C PRP45P28004 379 aaPredicted RBP7.45□□□□□ -1.22
RPT6YGL048C VPS70P47161 811 aa7.45□□□□□ -1.22
RPT6YGL048C IMH1Q06704 911 aaKnown RBP7.45□□□□□ -1.22
RPT6YGL048C AIM44Q99299 758 aa7.45□□□□□ -1.22
RPT6YGL048C AI4P03878 556 aa7.44□□□□□ -1.22
RPT6YGL048C SOL3P38858 249 aa7.43□□□□□ -1.22
RPT6YGL048C ADE6P38972 1358 aaKnown RBP7.43□□□□□ -1.22
RPT6YGL048C MPH3P0CE00 602 aa7.42□□□□□ -1.22
RPT6YGL048C SPE2P21182 396 aa7.42□□□□□ -1.22
RPT6YGL048C PRP5P21372 849 aaPredicted RBP7.42□□□□□ -1.22
RPT6YGL048C NST1P53935 1240 aa7.41□□□□□ -1.22
RPT6YGL048C IOC4Q04213 475 aa7.41□□□□□ -1.22
RPT6YGL048C PSK1P31374 1356 aa7.41□□□□□ -1.22
RPT6YGL048C REF2P42073 533 aaPredicted RBP7.4□□□□□ -1.22
RPT6YGL048C KIP3P53086 805 aaKnown RBP7.4□□□□□ -1.22
RPT6YGL048C RRP5Q05022 1729 aaKnown RBP7.4□□□□□ -1.23
RPT6YGL048C YDL129WQ07555 291 aa7.39□□□□□ -1.23
RPT6YGL048C BMT6Q12291 365 aa7.39□□□□□ -1.23
RPT6YGL048C MSB3P48566 633 aaPredicted RBP7.38□□□□□ -1.23
RPT6YGL048C PRP43P53131 767 aaKnown RBP7.38□□□□□ -1.23
RPT6YGL048C PML39Q03760 334 aa7.36□□□□□ -1.23
RPT6YGL048C MAK21Q12176 1025 aaKnown RBP7.36□□□□□ -1.23
RPT6YGL048C KEX1P09620 729 aa7.35□□□□□ -1.23
RPT6YGL048C VHR2P40041 505 aa7.35□□□□□ -1.23
RPT6YGL048C UBP14P38237 781 aaKnown RBP7.34□□□□□ -1.23
RPT6YGL048C CHZ1P40019 153 aaPredicted RBP7.34□□□□□ -1.23
RPT6YGL048C IES2P40154 320 aa7.34□□□□□ -1.23
RPT6YGL048C DOT5P40553 215 aa7.34□□□□□ -1.23
RPT6YGL048C LEU2P04173 364 aaPredicted RBP7.33□□□□□ -1.24
RPT6YGL048C KIC1P38692 1080 aa7.33□□□□□ -1.24
RPT6YGL048C YLR326WQ06170 240 aaKnown RBP7.33□□□□□ -1.24
RPT6YGL048C SLM3Q12093 417 aa7.33□□□□□ -1.24
RPT6YGL048C YLR419WQ06698 1435 aaKnown RBP7.33□□□□□ -1.24
RPT6YGL048C RAD54P32863 898 aa7.32□□□□□ -1.24
RPT6YGL048C SAP30P38429 201 aa7.32□□□□□ -1.24
RPT6YGL048C MTR4P47047 1073 aaKnown RBP7.32□□□□□ -1.24
RPT6YGL048C YML133CQ03099 1374 aa7.32□□□□□ -1.24
RPT6YGL048C YLL067CQ07888 1374 aa7.32□□□□□ -1.24
RPT6YGL048C YLL066CQ99208 1374 aa7.32□□□□□ -1.24
RPT6YGL048C RPN11P43588 306 aaKnown RBP7.31□□□□□ -1.24
RPT6YGL048C TCB1Q12466 1186 aa7.31□□□□□ -1.24
RPT6YGL048C YRF1-2P40105 1681 aa7.31□□□□□ -1.24
RPT6YGL048C RSF2P46974 1380 aa7.31□□□□□ -1.24
RPT6YGL048C RPS24AP0CX31 135 aaKnown RBP7.3□□□□□ -1.24
RPT6YGL048C RPS24BP0CX32 135 aaKnown RBP7.3□□□□□ -1.24
RPT6YGL048C RPP1BP10622 106 aaKnown RBP7.3□□□□□ -1.24
RPT6YGL048C ILV3P39522 585 aaKnown RBP7.3□□□□□ -1.24
RPT6YGL048C YRB30P53107 440 aaPredicted RBP7.3□□□□□ -1.24
RPT6YGL048C FOX2Q02207 900 aaKnown RBP7.3□□□□□ -1.24
RPT6YGL048C PEX29Q03370 554 aa7.3□□□□□ -1.24
RPT6YGL048C TY4B-HP0C2J7 1802 aa7.29□□□□□ -1.24
RPT6YGL048C TY4B-JP47024 1803 aa7.29□□□□□ -1.24
RPT6YGL048C PBS2P08018 668 aa7.29□□□□□ -1.24
RPT6YGL048C CSE4P36012 229 aa7.29□□□□□ -1.24
RPT6YGL048C ORC1P54784 914 aaPredicted RBP7.29□□□□□ -1.24
RPT6YGL048C COX6P00427 148 aa7.28□□□□□ -1.24
RPT6YGL048C LEU3P08638 886 aa7.28□□□□□ -1.24
RPT6YGL048C NPR2P39923 615 aa7.28□□□□□ -1.24
RPT6YGL048C SPB4P25808 606 aaPredicted RBP7.27□□□□□ -1.25
RPT6YGL048C PCS60P38137 543 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25 RIP-Chip
RPT6YGL048C SLI15P38283 698 aa7.27□□□□□ -1.25
RPT6YGL048C ROM2P51862 1356 aaKnown RBP7.27□□□□□ -1.25
RPT6YGL048C YEF3P16521 1044 aaKnown RBP7.26□□□□□ -1.25
RPT6YGL048C MID1P41821 548 aa7.26□□□□□ -1.25
RPT6YGL048C YDR090CQ03193 310 aa7.26□□□□□ -1.25
RPT6YGL048C UBP1P25037 809 aa7.25□□□□□ -1.25
RPT6YGL048C LYS4P49367 693 aaPredicted RBP7.25□□□□□ -1.25
RPT6YGL048C URB1P34241 1764 aaKnown RBP7.24□□□□□ -1.25
RPT6YGL048C YBL086CP38177 466 aa7.24□□□□□ -1.25
RPT6YGL048C DSF2P38213 736 aa7.24□□□□□ -1.25
RPT6YGL048C XKS1P42826 600 aa7.24□□□□□ -1.25
RPT6YGL048C EDE1P34216 1381 aa7.23□□□□□ -1.25
RPT6YGL048C YKL133CP36066 463 aa7.23□□□□□ -1.25
RPT6YGL048C COBP00163 385 aa7.22□□□□□ -1.25
RPT6YGL048C YKR075CP36155 307 aa7.22□□□□□ -1.25
RPT6YGL048C DPL1Q05567 589 aa7.22□□□□□ -1.25
RPT6YGL048C MPC54Q08550 464 aa7.22□□□□□ -1.25
RPT6YGL048C MAM3Q12296 706 aa7.22□□□□□ -1.25
RPT6YGL048C CHL1P22516 861 aaPredicted RBP7.21□□□□□ -1.26
RPT6YGL048C PRE3P38624 215 aa7.21□□□□□ -1.26
RPT6YGL048C CTH1P47976 325 aa7.21□□□□□ -1.26
RPT6YGL048C ARH1P48360 493 aa7.21□□□□□ -1.26
RPT6YGL048C SCT1P32784 759 aa7.2□□□□□ -1.26
RPT6YGL048C ELP4Q02884 456 aaKnown RBP7.2□□□□□ -1.26
RPT6YGL048C YRF1-3P0CX14 1859 aa7.19□□□□□ -1.26
RPT6YGL048C YRF1-7P0CX15 1859 aa7.19□□□□□ -1.26
RPT6YGL048C YRF1-6P53819 1859 aa7.19□□□□□ -1.26
RPT6YGL048C HAP5Q02516 242 aa7.19□□□□□ -1.26
RPT6YGL048C UGA2P38067 497 aa7.18□□□□□ -1.26
RPT6YGL048C ENP1P38333 483 aaKnown RBP7.18□□□□□ -1.26
RPT6YGL048C YJL181WP46987 611 aa7.18□□□□□ -1.26
RPT6YGL048C LAM6Q08001 693 aa7.18□□□□□ -1.26
RPT6YGL048C GAS4Q08271 471 aa7.18□□□□□ -1.26
RPT6YGL048C DPS1P04802 557 aaKnown RBP7.17□□□□□ -1.26
RPT6YGL048C SSA2P10592 639 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms