RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	NUP145	P49687	1317 aa		11.21	□□□□□ -0.61
LSM5	YER146W	YIL055C	P40523	627 aa	Known RBP	11.21	□□□□□ -0.61
LSM5	YER146W	YFR016C	P43597	1233 aa	Known RBP	11.21	□□□□□ -0.61
LSM5	YER146W	ZDS1	P50111	915 aa	Known RBP	11.21	□□□□□ -0.61
LSM5	YER146W	YKL133C	P36066	463 aa		11.2	□□□□□ -0.62
LSM5	YER146W	GYP7	P48365	746 aa		11.2	□□□□□ -0.62
LSM5	YER146W	ADE16	P54113	591 aa	Known RBP	11.2	□□□□□ -0.62
LSM5	YER146W	LYS2	P07702	1392 aa		11.18	□□□□□ -0.62
LSM5	YER146W	UGA3	P26370	528 aa		11.18	□□□□□ -0.62
LSM5	YER146W	OSM1	P21375	501 aa	Known RBP	11.17	□□□□□ -0.62
LSM5	YER146W	DOT5	P40553	215 aa		11.17	□□□□□ -0.62
LSM5	YER146W	KCC4	P25389	1037 aa		11.16	□□□□□ -0.62
LSM5	YER146W	RRT14	P40470	206 aa		11.15	□□□□□ -0.62
LSM5	YER146W	FOX2	Q02207	900 aa	Known RBP	11.15	□□□□□ -0.62
LSM5	YER146W	YIL092W	P40497	633 aa		11.14	□□□□□ -0.63
LSM5	YER146W	NSE3	Q05541	303 aa		11.14	□□□□□ -0.63
LSM5	YER146W	MAK21	Q12176	1025 aa	Known RBP	11.14	□□□□□ -0.63
LSM5	YER146W	FRK1	Q03002	865 aa	Predicted RBP	11.13	□□□□□ -0.63
LSM5	YER146W	BMS1	Q08965	1183 aa	Known RBP	11.13	□□□□□ -0.63
LSM5	YER146W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.12	□□□□□ -0.63	not detected
LSM5	YER146W	SRT1	Q03175	343 aa		11.12	□□□□□ -0.63
LSM5	YER146W	COQ4	O13525	335 aa		11.11	□□□□□ -0.63
LSM5	YER146W	YKR075C	P36155	307 aa		11.11	□□□□□ -0.63
LSM5	YER146W	COB	P00163	385 aa		11.1	□□□□□ -0.63
LSM5	YER146W	RAD2	P07276	1031 aa		11.1	□□□□□ -0.63
LSM5	YER146W	ATG13	Q06628	738 aa		11.09	□□□□□ -0.63
LSM5	YER146W	FUN12	P39730	1002 aa	Known RBP	11.08	□□□□□ -0.64
LSM5	YER146W	YMR074C	Q04773	145 aa		11.08	□□□□□ -0.64
LSM5	YER146W	YOL057W	Q08225	711 aa		11.08	□□□□□ -0.64
LSM5	YER146W	DAL5	P15365	543 aa		11.05	□□□□□ -0.64
LSM5	YER146W	GLN1	P32288	370 aa	Known RBP	11.05	□□□□□ -0.64
LSM5	YER146W	YBP2	P53169	641 aa		11.05	□□□□□ -0.64
LSM5	YER146W	ALE1	Q08548	619 aa		11.05	□□□□□ -0.64
LSM5	YER146W	GRX1	P25373	110 aa	Known RBP	11.04	□□□□□ -0.64
LSM5	YER146W	RAD4	P14736	754 aa		11.03	□□□□□ -0.64
LSM5	YER146W	YPP1	P46951	817 aa		11.03	□□□□□ -0.64
LSM5	YER146W	RMT2	Q03305	412 aa		11.03	□□□□□ -0.64
LSM5	YER146W	YDR306C	Q06640	478 aa		11.03	□□□□□ -0.64
LSM5	YER146W	LAM6	Q08001	693 aa		11.03	□□□□□ -0.64
LSM5	YER146W	TUM1	Q08686	304 aa	Known RBP	11.03	□□□□□ -0.64
LSM5	YER146W	RPS19A	P07280	144 aa	Known RBP	11.02	□□□□□ -0.65
LSM5	YER146W	RPS19B	P07281	144 aa	Predicted RBP	11.02	□□□□□ -0.65
LSM5	YER146W	RPN11	P43588	306 aa	Known RBP	11.02	□□□□□ -0.65
LSM5	YER146W	YJR008W	P47085	338 aa		11.02	□□□□□ -0.65
LSM5	YER146W	YBR287W	P38355	427 aa		11.01	□□□□□ -0.65
LSM5	YER146W	POL32	P47110	350 aa		11.01	□□□□□ -0.65
LSM5	YER146W	TFA1	P36100	482 aa		11	□□□□□ -0.65
LSM5	YER146W	NPR2	P39923	615 aa		11	□□□□□ -0.65
LSM5	YER146W	FPR3	P38911	411 aa	Known RBP	10.99	□□□□□ -0.65
LSM5	YER146W	DNM1	P54861	757 aa		10.99	□□□□□ -0.65
LSM5	YER146W	NOP53	Q12080	455 aa	Known RBP	10.99	□□□□□ -0.65
LSM5	YER146W	PHM7	Q12252	991 aa		10.99	□□□□□ -0.65
LSM5	YER146W	PRP40	P33203	583 aa	Known RBP	10.98	□□□□□ -0.65
LSM5	YER146W	MDG1	P53885	366 aa		10.98	□□□□□ -0.65
LSM5	YER146W	SSP2	Q08646	371 aa		10.98	□□□□□ -0.65
LSM5	YER146W	RIM15	P43565	1770 aa		10.98	□□□□□ -0.65
LSM5	YER146W	TRP5	P00931	707 aa	Known RBP	10.97	□□□□□ -0.65
LSM5	YER146W	CSI1	Q04368	295 aa		10.97	□□□□□ -0.65
LSM5	YER146W	MSB4	Q12317	492 aa		10.97	□□□□□ -0.65
LSM5	YER146W	MRP7	P12687	371 aa		10.96	□□□□□ -0.65
LSM5	YER146W	CST6	P40535	587 aa		10.96	□□□□□ -0.65
LSM5	YER146W	ZDS2	P54786	942 aa		10.96	□□□□□ -0.65
LSM5	YER146W	YPR204W	Q08995	1032 aa		10.95	□□□□□ -0.66
LSM5	YER146W	SWI1	P09547	1314 aa		10.94	□□□□□ -0.66
LSM5	YER146W	ARG8	P18544	423 aa		10.94	□□□□□ -0.66
LSM5	YER146W	YJL181W	P46987	611 aa		10.94	□□□□□ -0.66
LSM5	YER146W	PUF6	Q04373	656 aa	Known RBP	10.94	□□□□□ -0.66
LSM5	YER146W	BUD31	P25337	157 aa	Predicted RBP	10.93	□□□□□ -0.66
LSM5	YER146W	RAD24	P32641	659 aa		10.93	□□□□□ -0.66
LSM5	YER146W	SET1	P38827	1080 aa	Known RBP	10.93	□□□□□ -0.66
LSM5	YER146W	GRE2	Q12068	342 aa	Known RBP	10.93	□□□□□ -0.66
LSM5	YER146W	BOI2	P39969	1040 aa		10.92	□□□□□ -0.66
LSM5	YER146W	YLR271W	Q06152	274 aa		10.92	□□□□□ -0.66
LSM5	YER146W	UBP1	P25037	809 aa		10.91	□□□□□ -0.66
LSM5	YER146W	HGH1	P48362	394 aa	Known RBP	10.91	□□□□□ -0.66
LSM5	YER146W	YGR122W	P53272	402 aa		10.91	□□□□□ -0.66
LSM5	YER146W	DCD1	P06773	312 aa		10.9	□□□□□ -0.66
LSM5	YER146W	GCD7	P32502	381 aa	Predicted RBP	10.9	□□□□□ -0.66
LSM5	YER146W	YNG2	P38806	282 aa	Known RBP	10.9	□□□□□ -0.66
LSM5	YER146W	NYV1	Q12255	253 aa		10.9	□□□□□ -0.66
LSM5	YER146W	ILV3	P39522	585 aa	Known RBP	10.89	□□□□□ -0.67
LSM5	YER146W	NOP8	Q08287	484 aa	Predicted RBP	10.89	□□□□□ -0.67
LSM5	YER146W	APL2	P36000	726 aa	Predicted RBP	10.88	□□□□□ -0.67
LSM5	YER146W	TEA1	P47988	759 aa		10.88	□□□□□ -0.67
LSM5	YER146W	NUP133	P36161	1157 aa		10.87	□□□□□ -0.67
LSM5	YER146W	GTT3	P39996	337 aa		10.87	□□□□□ -0.67
LSM5	YER146W	LYS4	P49367	693 aa	Predicted RBP	10.87	□□□□□ -0.67
LSM5	YER146W	SPO1	P53541	631 aa		10.87	□□□□□ -0.67
LSM5	YER146W	SWC3	P31376	625 aa		10.86	□□□□□ -0.67
LSM5	YER146W	LPD1	P09624	499 aa	Known RBP	10.85	□□□□□ -0.67
LSM5	YER146W	BDF1	P35817	686 aa		10.85	□□□□□ -0.67
LSM5	YER146W	UBP12	P39538	1254 aa		10.85	□□□□□ -0.67
LSM5	YER146W	CTH1	P47976	325 aa		10.85	□□□□□ -0.67
LSM5	YER146W	UTP22	P53254	1237 aa	Predicted RBP	10.85	□□□□□ -0.67
LSM5	YER146W	VPS64	Q03944	604 aa		10.85	□□□□□ -0.67
LSM5	YER146W	UTP10	P42945	1769 aa	Known RBP	10.84	□□□□□ -0.67
LSM5	YER146W	ECM16	Q04217	1267 aa	Known RBP	10.83	□□□□□ -0.68
LSM5	YER146W	BUG1	Q12191	341 aa		10.83	□□□□□ -0.68
LSM5	YER146W	SSK22	P25390	1331 aa	Predicted RBP	10.83	□□□□□ -0.68
LSM5	YER146W	MTC5	Q03897	1148 aa		10.82	□□□□□ -0.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms