RNA–Protein interactions for RNA: YER119C

AVT6, Transcript of Vacuolar aspartate and glutamate exporter, yeastyeast

Gene AVT6, Length 1,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT6YER119C EDE1P34216 1381 aa13□□□□□ -0.33
AVT6YER119C ROM2P51862 1356 aaKnown RBP13□□□□□ -0.33
AVT6YER119C NUP145P49687 1317 aa13□□□□□ -0.33
AVT6YER119C YFR016CP43597 1233 aaKnown RBP13□□□□□ -0.33
AVT6YER119C MAK21Q12176 1025 aaKnown RBP12.99□□□□□ -0.33
AVT6YER119C UGA3P26370 528 aa12.98□□□□□ -0.33
AVT6YER119C YKL133CP36066 463 aa12.98□□□□□ -0.33
AVT6YER119C KCC4P25389 1037 aa12.97□□□□□ -0.33
AVT6YER119C FUN12P39730 1002 aaKnown RBP12.97□□□□□ -0.33
AVT6YER119C RAD2P07276 1031 aa12.96□□□□□ -0.33
AVT6YER119C RRT14P40470 206 aa12.96□□□□□ -0.33
AVT6YER119C YIL092WP40497 633 aa12.96□□□□□ -0.33
AVT6YER119C BUD27P43573 796 aaKnown RBP RIP-Chip data12.96□□□□□ -0.33not detected
AVT6YER119C ADE16P54113 591 aaKnown RBP12.96□□□□□ -0.33
AVT6YER119C LYS2P07702 1392 aa12.96□□□□□ -0.34
AVT6YER119C NSE3Q05541 303 aa12.95□□□□□ -0.34
AVT6YER119C BMS1Q08965 1183 aaKnown RBP12.94□□□□□ -0.34
AVT6YER119C OSM1P21375 501 aaKnown RBP12.93□□□□□ -0.34
AVT6YER119C YIL055CP40523 627 aaKnown RBP12.93□□□□□ -0.34
AVT6YER119C SRT1Q03175 343 aa12.92□□□□□ -0.34
AVT6YER119C DOT5P40553 215 aa12.9□□□□□ -0.34
AVT6YER119C FRK1Q03002 865 aaPredicted RBP12.9□□□□□ -0.34
AVT6YER119C COQ4O13525 335 aa12.89□□□□□ -0.35
AVT6YER119C DAL5P15365 543 aa12.89□□□□□ -0.35
AVT6YER119C FPR3P38911 411 aaKnown RBP12.89□□□□□ -0.35
AVT6YER119C ATG13Q06628 738 aa12.89□□□□□ -0.35
AVT6YER119C FOX2Q02207 900 aaKnown RBP12.88□□□□□ -0.35
AVT6YER119C YBR287WP38355 427 aa12.86□□□□□ -0.35
AVT6YER119C YOL057WQ08225 711 aa12.86□□□□□ -0.35
AVT6YER119C COBP00163 385 aa12.85□□□□□ -0.35
AVT6YER119C YBP2P53169 641 aa12.85□□□□□ -0.35
AVT6YER119C TFA1P36100 482 aa12.84□□□□□ -0.35
AVT6YER119C YPP1P46951 817 aa12.84□□□□□ -0.35
AVT6YER119C YKR075CP36155 307 aa12.83□□□□□ -0.36
AVT6YER119C ALE1Q08548 619 aa12.83□□□□□ -0.36
AVT6YER119C RAD4P14736 754 aa12.82□□□□□ -0.36
AVT6YER119C POL32P47110 350 aa12.82□□□□□ -0.36
AVT6YER119C RMT2Q03305 412 aa12.82□□□□□ -0.36
AVT6YER119C GRX1P25373 110 aaKnown RBP12.79□□□□□ -0.36
AVT6YER119C YMR074CQ04773 145 aa12.79□□□□□ -0.36
AVT6YER119C YDR306CQ06640 478 aa12.79□□□□□ -0.36
AVT6YER119C LAM6Q08001 693 aa12.79□□□□□ -0.36
AVT6YER119C TRP5P00931 707 aaKnown RBP12.78□□□□□ -0.36
AVT6YER119C RPS19AP07280 144 aaKnown RBP12.78□□□□□ -0.36
AVT6YER119C RPS19BP07281 144 aaPredicted RBP12.78□□□□□ -0.36
AVT6YER119C CSI1Q04368 295 aa12.78□□□□□ -0.36
AVT6YER119C RIM15P43565 1770 aa12.77□□□□□ -0.36
AVT6YER119C DNM1P54861 757 aa12.76□□□□□ -0.37
AVT6YER119C PUF6Q04373 656 aaKnown RBP12.76□□□□□ -0.37
AVT6YER119C NOP53Q12080 455 aaKnown RBP12.76□□□□□ -0.37
AVT6YER119C MRP7P12687 371 aa12.75□□□□□ -0.37
AVT6YER119C PRP40P33203 583 aaKnown RBP12.75□□□□□ -0.37
AVT6YER119C TUM1Q08686 304 aaKnown RBP12.75□□□□□ -0.37
AVT6YER119C RPN11P43588 306 aaKnown RBP12.74□□□□□ -0.37
AVT6YER119C YJR008WP47085 338 aa12.74□□□□□ -0.37
AVT6YER119C MDG1P53885 366 aa12.74□□□□□ -0.37
AVT6YER119C SSP2Q08646 371 aa12.74□□□□□ -0.37
AVT6YER119C CST6P40535 587 aa12.73□□□□□ -0.37
AVT6YER119C NOP8Q08287 484 aaPredicted RBP12.73□□□□□ -0.37
AVT6YER119C GLN1P32288 370 aaKnown RBP12.72□□□□□ -0.37
AVT6YER119C YJL181WP46987 611 aa12.72□□□□□ -0.37
AVT6YER119C ZDS2P54786 942 aa12.72□□□□□ -0.37
AVT6YER119C PHM7Q12252 991 aa12.72□□□□□ -0.37
AVT6YER119C YNG2P38806 282 aaKnown RBP12.71□□□□□ -0.37
AVT6YER119C RAD24P32641 659 aa12.7□□□□□ -0.38
AVT6YER119C YGR122WP53272 402 aa12.7□□□□□ -0.38
AVT6YER119C NPR2P39923 615 aa12.69□□□□□ -0.38
AVT6YER119C MSB4Q12317 492 aa12.69□□□□□ -0.38
AVT6YER119C SWI1P09547 1314 aa12.69□□□□□ -0.38
AVT6YER119C NUP133P36161 1157 aa12.67□□□□□ -0.38
AVT6YER119C BOI2P39969 1040 aa12.67□□□□□ -0.38
AVT6YER119C HGH1P48362 394 aaKnown RBP12.67□□□□□ -0.38
AVT6YER119C YPR204WQ08995 1032 aa12.67□□□□□ -0.38
AVT6YER119C UBP1P25037 809 aa12.66□□□□□ -0.38
AVT6YER119C ILV3P39522 585 aaKnown RBP12.66□□□□□ -0.38
AVT6YER119C SPO1P53541 631 aa12.66□□□□□ -0.38
AVT6YER119C RPC31P17890 251 aa12.65□□□□□ -0.38
AVT6YER119C ARG8P18544 423 aa12.65□□□□□ -0.38
AVT6YER119C GCD7P32502 381 aaPredicted RBP12.65□□□□□ -0.38
AVT6YER119C VPS64Q03944 604 aa12.65□□□□□ -0.38
AVT6YER119C APL2P36000 726 aaPredicted RBP12.64□□□□□ -0.39
AVT6YER119C ECM16Q04217 1267 aaKnown RBP12.64□□□□□ -0.39
AVT6YER119C YLR271WQ06152 274 aa12.64□□□□□ -0.39
AVT6YER119C GRE2Q12068 342 aaKnown RBP12.64□□□□□ -0.39
AVT6YER119C SWC3P31376 625 aa12.63□□□□□ -0.39
AVT6YER119C SET1P38827 1080 aaKnown RBP12.63□□□□□ -0.39
AVT6YER119C BUD31P25337 157 aaPredicted RBP12.62□□□□□ -0.39
AVT6YER119C TEA1P47988 759 aa12.62□□□□□ -0.39
AVT6YER119C NYV1Q12255 253 aa12.62□□□□□ -0.39
AVT6YER119C DCD1P06773 312 aa12.61□□□□□ -0.39
AVT6YER119C LPD1P09624 499 aaKnown RBP12.6□□□□□ -0.39
AVT6YER119C UBP12P39538 1254 aa12.6□□□□□ -0.39
AVT6YER119C UTP10P42945 1769 aaKnown RBP12.59□□□□□ -0.39
AVT6YER119C NMD2P38798 1089 aaKnown RBP12.58□□□□□ -0.4
AVT6YER119C SER1P33330 395 aaKnown RBP12.57□□□□□ -0.4
AVT6YER119C YGL082WP53155 381 aa12.57□□□□□ -0.4
AVT6YER119C BUG1Q12191 341 aa12.57□□□□□ -0.4
AVT6YER119C LYS4P49367 693 aaPredicted RBP12.56□□□□□ -0.4
AVT6YER119C BDF1P35817 686 aa12.55□□□□□ -0.4
AVT6YER119C ITC1P53125 1264 aa12.55□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms