RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C ENO1P00924 437 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C MKS1P34072 584 aa2.07□□□□□ -2.08
SEC3YER008C ENO2P00925 437 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C ALA1P40825 983 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C THI12P42883 340 aa2.07□□□□□ -2.08
SEC3YER008C THI5P43534 340 aa2.07□□□□□ -2.08
SEC3YER008C THI11P47183 340 aa2.07□□□□□ -2.08
SEC3YER008C YML020WQ03722 664 aa2.07□□□□□ -2.08
SEC3YER008C THI13Q07748 340 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-LR1P0C2J3 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-FP0CX63 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-GR2P0CX64 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-CP25384 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-DR2Q03494 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY1B-DR1Q03855 1755 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-DR3Q07791 1770 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C TY2B-OR1Q12113 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-DR1Q12472 1770 aa2.07□□□□□ -2.08
SEC3YER008C TY2B-OR2Q12501 1770 aa2.07□□□□□ -2.08
SEC3YER008C HIR3P47171 1648 aa2.07□□□□□ -2.08
SEC3YER008C RPP2BP02400 110 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C MIP1P15801 1254 aa2.07□□□□□ -2.08
SEC3YER008C SIT4P20604 311 aa2.07□□□□□ -2.08
SEC3YER008C UGA3P26370 528 aa2.07□□□□□ -2.08
SEC3YER008C SPT5P27692 1063 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C DLD3P39976 496 aaKnown RBP2.07□□□□□ -2.08
SEC3YER008C RPA14P50106 137 aa2.07□□□□□ -2.08
SEC3YER008C SAS4Q04003 481 aa2.07□□□□□ -2.08
SEC3YER008C MCM16Q12262 181 aa2.07□□□□□ -2.08
SEC3YER008C SIN3P22579 1536 aa2.06□□□□□ -2.08
SEC3YER008C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SEC3YER008C SYH1Q02875 849 aaKnown RBP2.06□□□□□ -2.08
SEC3YER008C PDC1P06169 563 aaKnown RBP2.06□□□□□ -2.08
SEC3YER008C SSA1P10591 642 aaKnown RBP2.06□□□□□ -2.08
SEC3YER008C MAK16P10962 306 aaPredicted RBP2.06□□□□□ -2.08
SEC3YER008C PDI1P17967 522 aaKnown RBP2.06□□□□□ -2.08
SEC3YER008C DFG5Q05031 458 aa2.06□□□□□ -2.08
SEC3YER008C TY1B-HO13535 1793 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-DR5P0C2I2 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-DR6P0C2I3 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-LR2P0C2I5 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-LR3P0C2I6 1755 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C TY1B-PR1P0C2I9 1755 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C TY1B-PR2P0C2J0 1756 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-PR3P0C2J1 1755 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C TY1B-JR1P47098 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-ML2Q03434 1755 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C TY1B-ER1Q03612 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-ML1Q04711 1755 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C TY1B-GR2Q12269 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-OLQ12273 1755 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-PLQ12414 1755 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C HXT10P43581 546 aa2.05□□□□□ -2.08
SEC3YER008C CWH41P53008 833 aa2.05□□□□□ -2.08
SEC3YER008C ISR1Q06098 443 aaKnown RBP2.05□□□□□ -2.08
SEC3YER008C YPR015CQ12531 247 aa2.05□□□□□ -2.08
SEC3YER008C TY1B-DR3Q99231 1755 aa2.05□□□□□ -2.08
SEC3YER008C TRK1P12685 1235 aa2.05□□□□□ -2.08
SEC3YER008C YPR097WQ06839 1073 aa2.05□□□□□ -2.08
SEC3YER008C TY2B-BQ12491 1770 aa2.04□□□□□ -2.08
SEC3YER008C GAP1P19145 602 aaPredicted RBP2.04□□□□□ -2.08
SEC3YER008C FIG4P42837 879 aa2.04□□□□□ -2.08
SEC3YER008C BDP1P46678 594 aa2.04□□□□□ -2.08
SEC3YER008C ORC1P54784 914 aaPredicted RBP2.04□□□□□ -2.08
SEC3YER008C UTR2P32623 467 aa2.04□□□□□ -2.08
SEC3YER008C ATG20Q07528 640 aa2.04□□□□□ -2.08
SEC3YER008C BDS1Q08347 646 aa2.04□□□□□ -2.08
SEC3YER008C TTI1P36097 1038 aa2.04□□□□□ -2.08
SEC3YER008C FOX2Q02207 900 aaKnown RBP2.04□□□□□ -2.08
SEC3YER008C YML082WQ04533 649 aaKnown RBP2.04□□□□□ -2.08
SEC3YER008C TY1A-DR4O74302 440 aa2.03□□□□□ -2.08
SEC3YER008C RAS1P01119 309 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-HP0C2I4 478 aaKnown RBP2.03□□□□□ -2.08
SEC3YER008C TY1A-AP0CX57 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-PR1P0CX58 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-ORP0CX59 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-PR2P0CX60 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-DR5P0CX65 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-ER2P0CX66 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-GR3P0CX67 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-LR1P0CX68 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-MR2P0CX69 440 aa2.03□□□□□ -2.08
SEC3YER008C VAN1P23642 535 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-JR2P47099 440 aa2.03□□□□□ -2.08
SEC3YER008C YPL062WQ02781 134 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-DR1Q03856 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-ML1Q04706 440 aaKnown RBP2.03□□□□□ -2.08
SEC3YER008C PUN1Q06991 263 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-BRQ12217 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-NL2Q12470 440 aa2.03□□□□□ -2.08
SEC3YER008C TY1A-GR2Q12485 440 aa2.03□□□□□ -2.08
SEC3YER008C SEC2P17065 759 aa2.03□□□□□ -2.08
SEC3YER008C SLD2P34252 453 aa2.03□□□□□ -2.08
SEC3YER008C YTA6P40328 754 aa2.03□□□□□ -2.08
SEC3YER008C YFL034WP43564 1073 aa2.03□□□□□ -2.08
SEC3YER008C UTP7P40055 554 aaKnown RBP2.02□□□□□ -2.09
SEC3YER008C YML083CQ04526 418 aa2.02□□□□□ -2.09
SEC3YER008C HAT1Q12341 374 aa2.02□□□□□ -2.09
SEC3YER008C TGL4P36165 910 aa2.02□□□□□ -2.09
SEC3YER008C CDC3P32457 520 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 632.4 ms