RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YMR074C	Q04773	145 aa		9.25	□□□□□ -0.93
SKP1	YDR328C	RTT109	Q07794	436 aa		9.25	□□□□□ -0.93
SKP1	YDR328C	RVB2	Q12464	471 aa	Known RBP	9.24	□□□□□ -0.93
SKP1	YDR328C	OSM1	P21375	501 aa	Known RBP	9.23	□□□□□ -0.93
SKP1	YDR328C	TPD3	P31383	635 aa		9.23	□□□□□ -0.93
SKP1	YDR328C	FRK1	Q03002	865 aa	Predicted RBP	9.23	□□□□□ -0.93
SKP1	YDR328C	YRB30	P53107	440 aa	Predicted RBP	9.22	□□□□□ -0.93
SKP1	YDR328C	COB	P00163	385 aa		9.21	□□□□□ -0.94
SKP1	YDR328C	YKR075C	P36155	307 aa		9.21	□□□□□ -0.94
SKP1	YDR328C	MAM1	P40065	302 aa		9.21	□□□□□ -0.94
SKP1	YDR328C	ZDS1	P50111	915 aa	Known RBP	9.21	□□□□□ -0.94
SKP1	YDR328C	KCC4	P25389	1037 aa		9.2	□□□□□ -0.94
SKP1	YDR328C	UGA3	P26370	528 aa		9.19	□□□□□ -0.94
SKP1	YDR328C	RPN11	P43588	306 aa	Known RBP	9.19	□□□□□ -0.94
SKP1	YDR328C	ATG13	Q06628	738 aa		9.19	□□□□□ -0.94
SKP1	YDR328C	EDE1	P34216	1381 aa		9.19	□□□□□ -0.94
SKP1	YDR328C	GYP7	P48365	746 aa		9.18	□□□□□ -0.94
SKP1	YDR328C	LYS2	P07702	1392 aa		9.17	□□□□□ -0.94
SKP1	YDR328C	RRT14	P40470	206 aa		9.17	□□□□□ -0.94
SKP1	YDR328C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	9.17	□□□□□ -0.94	not detected
SKP1	YDR328C	NSE3	Q05541	303 aa		9.16	□□□□□ -0.94
SKP1	YDR328C	LAM6	Q08001	693 aa		9.16	□□□□□ -0.94
SKP1	YDR328C	BMS1	Q08965	1183 aa	Known RBP	9.16	□□□□□ -0.94
SKP1	YDR328C	NPR2	P39923	615 aa		9.15	□□□□□ -0.94
SKP1	YDR328C	YBP2	P53169	641 aa		9.15	□□□□□ -0.94
SKP1	YDR328C	COQ4	O13525	335 aa		9.14	□□□□□ -0.95
SKP1	YDR328C	BUD31	P25337	157 aa	Predicted RBP	9.13	□□□□□ -0.95
SKP1	YDR328C	PRP40	P33203	583 aa	Known RBP	9.13	□□□□□ -0.95
SKP1	YDR328C	YFR016C	P43597	1233 aa	Known RBP	9.13	□□□□□ -0.95
SKP1	YDR328C	SRT1	Q03175	343 aa		9.13	□□□□□ -0.95
SKP1	YDR328C	ALE1	Q08548	619 aa		9.13	□□□□□ -0.95
SKP1	YDR328C	TUM1	Q08686	304 aa	Known RBP	9.13	□□□□□ -0.95
SKP1	YDR328C	GRX1	P25373	110 aa	Known RBP	9.12	□□□□□ -0.95
SKP1	YDR328C	YBR287W	P38355	427 aa		9.11	□□□□□ -0.95
SKP1	YDR328C	YJL181W	P46987	611 aa		9.11	□□□□□ -0.95
SKP1	YDR328C	RMT2	Q03305	412 aa		9.11	□□□□□ -0.95
SKP1	YDR328C	MAK21	Q12176	1025 aa	Known RBP	9.11	□□□□□ -0.95
SKP1	YDR328C	UBP1	P25037	809 aa		9.1	□□□□□ -0.95
SKP1	YDR328C	YIL092W	P40497	633 aa		9.1	□□□□□ -0.95
SKP1	YDR328C	YOL057W	Q08225	711 aa		9.1	□□□□□ -0.95
SKP1	YDR328C	RAD4	P14736	754 aa		9.09	□□□□□ -0.95
SKP1	YDR328C	FUN12	P39730	1002 aa	Known RBP	9.09	□□□□□ -0.95
SKP1	YDR328C	NOP53	Q12080	455 aa	Known RBP	9.09	□□□□□ -0.95
SKP1	YDR328C	MSB4	Q12317	492 aa		9.09	□□□□□ -0.95
SKP1	YDR328C	UTP10	P42945	1769 aa	Known RBP	9.08	□□□□□ -0.96
SKP1	YDR328C	LYS4	P49367	693 aa	Predicted RBP	9.07	□□□□□ -0.96
SKP1	YDR328C	RAD2	P07276	1031 aa		9.06	□□□□□ -0.96
SKP1	YDR328C	DAL5	P15365	543 aa		9.06	□□□□□ -0.96
SKP1	YDR328C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	9.06	□□□□□ -0.96	not detected
SKP1	YDR328C	GRE2	Q12068	342 aa	Known RBP	9.06	□□□□□ -0.96
SKP1	YDR328C	MDG1	P53885	366 aa		9.05	□□□□□ -0.96
SKP1	YDR328C	ZDS2	P54786	942 aa		9.05	□□□□□ -0.96
SKP1	YDR328C	YDR306C	Q06640	478 aa		9.05	□□□□□ -0.96
SKP1	YDR328C	SSP2	Q08646	371 aa		9.05	□□□□□ -0.96
SKP1	YDR328C	PHM7	Q12252	991 aa		9.05	□□□□□ -0.96
SKP1	YDR328C	YPP1	P46951	817 aa		9.04	□□□□□ -0.96
SKP1	YDR328C	ARG8	P18544	423 aa		9.03	□□□□□ -0.96
SKP1	YDR328C	CTH1	P47976	325 aa		9.03	□□□□□ -0.96
SKP1	YDR328C	DNM1	P54861	757 aa		9.03	□□□□□ -0.96
SKP1	YDR328C	PRI1	P10363	409 aa		9.02	□□□□□ -0.97
SKP1	YDR328C	GTT3	P39996	337 aa		9.02	□□□□□ -0.97
SKP1	YDR328C	YJR008W	P47085	338 aa		9.02	□□□□□ -0.97
SKP1	YDR328C	YPR204W	Q08995	1032 aa		9.02	□□□□□ -0.97
SKP1	YDR328C	NYV1	Q12255	253 aa		9.02	□□□□□ -0.97
SKP1	YDR328C	RPS19A	P07280	144 aa	Known RBP	9.01	□□□□□ -0.97
SKP1	YDR328C	RPS19B	P07281	144 aa	Predicted RBP	9.01	□□□□□ -0.97
SKP1	YDR328C	MRP7	P12687	371 aa		9.01	□□□□□ -0.97
SKP1	YDR328C	DCD1	P06773	312 aa		9	□□□□□ -0.97
SKP1	YDR328C	BDF1	P35817	686 aa		9	□□□□□ -0.97
SKP1	YDR328C	APL2	P36000	726 aa	Predicted RBP	9	□□□□□ -0.97
SKP1	YDR328C	CST6	P40535	587 aa		9	□□□□□ -0.97
SKP1	YDR328C	TEA1	P47988	759 aa		9	□□□□□ -0.97
SKP1	YDR328C	CSI1	Q04368	295 aa		9	□□□□□ -0.97
SKP1	YDR328C	SWI1	P09547	1314 aa		9	□□□□□ -0.97
SKP1	YDR328C	TRP5	P00931	707 aa	Known RBP	8.99	□□□□□ -0.97
SKP1	YDR328C	YBL086C	P38177	466 aa		8.99	□□□□□ -0.97
SKP1	YDR328C	POL32	P47110	350 aa		8.99	□□□□□ -0.97
SKP1	YDR328C	ALD2	P47771	506 aa		8.99	□□□□□ -0.97
SKP1	YDR328C	YGR122W	P53272	402 aa		8.99	□□□□□ -0.97
SKP1	YDR328C	BUG1	Q12191	341 aa		8.99	□□□□□ -0.97
SKP1	YDR328C	RAD24	P32641	659 aa		8.98	□□□□□ -0.97
SKP1	YDR328C	UTP22	P53254	1237 aa	Predicted RBP	8.98	□□□□□ -0.97
SKP1	YDR328C	VPS64	Q03944	604 aa		8.98	□□□□□ -0.97
SKP1	YDR328C	YLR271W	Q06152	274 aa		8.98	□□□□□ -0.97
SKP1	YDR328C	SER1	P33330	395 aa	Known RBP	8.97	□□□□□ -0.97
SKP1	YDR328C	NUP133	P36161	1157 aa		8.97	□□□□□ -0.97
SKP1	YDR328C	RPG1	P38249	964 aa	Known RBP	8.97	□□□□□ -0.97
SKP1	YDR328C	SSA2	P10592	639 aa	Known RBP	8.96	□□□□□ -0.98
SKP1	YDR328C	SET1	P38827	1080 aa	Known RBP	8.96	□□□□□ -0.98
SKP1	YDR328C	YGL082W	P53155	381 aa		8.96	□□□□□ -0.98
SKP1	YDR328C	NOP8	Q08287	484 aa	Predicted RBP	8.96	□□□□□ -0.98
SKP1	YDR328C	SWC3	P31376	625 aa		8.95	□□□□□ -0.98
SKP1	YDR328C	UGA2	P38067	497 aa		8.95	□□□□□ -0.98
SKP1	YDR328C	FPR3	P38911	411 aa	Known RBP	8.95	□□□□□ -0.98
SKP1	YDR328C	BOI2	P39969	1040 aa		8.95	□□□□□ -0.98
SKP1	YDR328C	PUF6	Q04373	656 aa	Known RBP	8.95	□□□□□ -0.98
SKP1	YDR328C	TOS1	P38288	455 aa		8.94	□□□□□ -0.98
SKP1	YDR328C	YNG2	P38806	282 aa	Known RBP	8.94	□□□□□ -0.98
SKP1	YDR328C	ILV3	P39522	585 aa	Known RBP	8.94	□□□□□ -0.98
SKP1	YDR328C	ALD3	P54114	506 aa		8.94	□□□□□ -0.98

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms