RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	SEC3	P33332	1336 aa	Known RBP	6.26	□□□□□ -1.41
SUP35	YDR172W	TY3B-I	Q7LHG5	1498 aa	Known RBP	6.26	□□□□□ -1.41
SUP35	YDR172W	KIP3	P53086	805 aa	Known RBP	6.26	□□□□□ -1.41
SUP35	YDR172W	YDL129W	Q07555	291 aa		6.26	□□□□□ -1.41
SUP35	YDR172W	MHP1	P43638	1398 aa		6.24	□□□□□ -1.41
SUP35	YDR172W	ESL2	P36168	1195 aa		6.24	□□□□□ -1.41
SUP35	YDR172W	TFG1	P41895	735 aa	Predicted RBP	6.24	□□□□□ -1.41
SUP35	YDR172W	KIC1	P38692	1080 aa		6.24	□□□□□ -1.41
SUP35	YDR172W	MAM3	Q12296	706 aa		6.24	□□□□□ -1.41
SUP35	YDR172W	IES2	P40154	320 aa		6.22	□□□□□ -1.41
SUP35	YDR172W	PDS5	Q04264	1277 aa		6.22	□□□□□ -1.41
SUP35	YDR172W	BCK1	Q01389	1478 aa		6.21	□□□□□ -1.41
SUP35	YDR172W	YLR419W	Q06698	1435 aa	Known RBP	6.21	□□□□□ -1.41
SUP35	YDR172W	SAP30	P38429	201 aa		6.21	□□□□□ -1.41
SUP35	YDR172W	NUP42	P49686	430 aa	Known RBP	6.21	□□□□□ -1.42
SUP35	YDR172W	RAD9	P14737	1309 aa		6.2	□□□□□ -1.42
SUP35	YDR172W	YDR344C	Q05510	147 aa		6.2	□□□□□ -1.42
SUP35	YDR172W	CDC73	Q06697	393 aa		6.2	□□□□□ -1.42
SUP35	YDR172W	MPC54	Q08550	464 aa		6.2	□□□□□ -1.42
SUP35	YDR172W	USO1	P25386	1790 aa		6.2	□□□□□ -1.42
SUP35	YDR172W	SPE2	P21182	396 aa		6.19	□□□□□ -1.42
SUP35	YDR172W	ORC6	P38826	435 aa		6.19	□□□□□ -1.42
SUP35	YDR172W	BMT6	Q12291	365 aa		6.19	□□□□□ -1.42
SUP35	YDR172W	ALD4	P46367	519 aa	Known RBP	6.19	□□□□□ -1.42
SUP35	YDR172W	YJL171C	P46992	396 aa		6.19	□□□□□ -1.42
SUP35	YDR172W	TAF8	Q03750	510 aa		6.19	□□□□□ -1.42
SUP35	YDR172W	NOP2	P40991	618 aa	Known RBP	6.18	□□□□□ -1.42
SUP35	YDR172W	GAP1	P19145	602 aa	Predicted RBP	6.18	□□□□□ -1.42
SUP35	YDR172W	PRS1	P32895	427 aa	Known RBP	6.18	□□□□□ -1.42
SUP35	YDR172W	MAK10	Q02197	733 aa		6.18	□□□□□ -1.42
SUP35	YDR172W	PEX29	Q03370	554 aa		6.18	□□□□□ -1.42
SUP35	YDR172W	CAB1	Q04430	367 aa		6.18	□□□□□ -1.42
SUP35	YDR172W	DIT2	P21595	489 aa		6.17	□□□□□ -1.42
SUP35	YDR172W	DPL1	Q05567	589 aa		6.17	□□□□□ -1.42
SUP35	YDR172W	KRE5	P22023	1365 aa		6.16	□□□□□ -1.42
SUP35	YDR172W	TY1B-NL2	Q99337	1749 aa	Known RBP	6.16	□□□□□ -1.42
SUP35	YDR172W	NAP1	P25293	417 aa	Known RBP	6.15	□□□□□ -1.42
SUP35	YDR172W	CHZ1	P40019	153 aa	Predicted RBP	6.15	□□□□□ -1.42
SUP35	YDR172W	MRX12	P47084	519 aa		6.15	□□□□□ -1.42
SUP35	YDR172W	SCT1	P32784	759 aa		6.14	□□□□□ -1.43
SUP35	YDR172W	MLP1	Q02455	1875 aa	Known RBP	6.14	□□□□□ -1.43
SUP35	YDR172W	ARH1	P48360	493 aa		6.13	□□□□□ -1.43
SUP35	YDR172W	NMA111	P53920	997 aa		6.13	□□□□□ -1.43
SUP35	YDR172W	RIA1	P53893	1110 aa		6.13	□□□□□ -1.43
SUP35	YDR172W	CFT1	Q06632	1357 aa	Known RBP	6.13	□□□□□ -1.43
SUP35	YDR172W	PSE1	P32337	1089 aa	Known RBP	6.12	□□□□□ -1.43
SUP35	YDR172W	YNR021W	P53723	404 aa	Known RBP	6.12	□□□□□ -1.43
SUP35	YDR172W	RPP1B	P10622	106 aa	Known RBP	6.11	□□□□□ -1.43
SUP35	YDR172W	RGR1	P19263	1082 aa		6.11	□□□□□ -1.43
SUP35	YDR172W	CSC1	Q06538	782 aa		6.11	□□□□□ -1.43
SUP35	YDR172W	MVP1	P40959	511 aa	Known RBP	6.11	□□□□□ -1.43
SUP35	YDR172W	ISU2	Q12056	156 aa		6.11	□□□□□ -1.43
SUP35	YDR172W	HAP5	Q02516	242 aa		6.1	□□□□□ -1.43
SUP35	YDR172W	PRE3	P38624	215 aa		6.09	□□□□□ -1.43
SUP35	YDR172W	ELP4	Q02884	456 aa	Known RBP	6.09	□□□□□ -1.43
SUP35	YDR172W	TFB4	Q12004	338 aa		6.09	□□□□□ -1.43
SUP35	YDR172W	GLC3	P32775	704 aa		6.08	□□□□□ -1.44
SUP35	YDR172W	TRK1	P12685	1235 aa		6.08	□□□□□ -1.44
SUP35	YDR172W	RPN1	P38764	993 aa	Known RBP	6.08	□□□□□ -1.44
SUP35	YDR172W	RCM1	P53972	490 aa		6.08	□□□□□ -1.44
SUP35	YDR172W	YEF3	P16521	1044 aa	Known RBP	6.07	□□□□□ -1.44
SUP35	YDR172W	PPH3	P32345	308 aa		6.07	□□□□□ -1.44
SUP35	YDR172W	YML133C	Q03099	1374 aa		6.07	□□□□□ -1.44
SUP35	YDR172W	YLL067C	Q07888	1374 aa		6.07	□□□□□ -1.44
SUP35	YDR172W	YLL066C	Q99208	1374 aa		6.07	□□□□□ -1.44
SUP35	YDR172W	CHL1	P22516	861 aa	Predicted RBP	6.06	□□□□□ -1.44
SUP35	YDR172W	FUN12	P39730	1002 aa	Known RBP	6.06	□□□□□ -1.44
SUP35	YDR172W	YNR029C	P53729	429 aa	Known RBP	6.06	□□□□□ -1.44
SUP35	YDR172W	YPR109W	Q06104	294 aa		6.06	□□□□□ -1.44
SUP35	YDR172W	PEX21	P50091	288 aa		6.05	□□□□□ -1.44
SUP35	YDR172W	BNI4	P53858	892 aa		6.05	□□□□□ -1.44
SUP35	YDR172W	TUM1	Q08686	304 aa	Known RBP	6.05	□□□□□ -1.44
SUP35	YDR172W	YRR1	Q12172	810 aa		6.05	□□□□□ -1.44
SUP35	YDR172W	SPT23	P35210	1082 aa		6.05	□□□□□ -1.44
SUP35	YDR172W	PDR1	P12383	1068 aa		6.04	□□□□□ -1.44
SUP35	YDR172W	YMR196W	Q04336	1088 aa		6.04	□□□□□ -1.44
SUP35	YDR172W	PSK1	P31374	1356 aa		6.04	□□□□□ -1.44
SUP35	YDR172W	AIM7	Q12156	149 aa		6.03	□□□□□ -1.44
SUP35	YDR172W	RAM1	P22007	431 aa		6.03	□□□□□ -1.44
SUP35	YDR172W	LEO1	P38439	464 aa		6.03	□□□□□ -1.44
SUP35	YDR172W	ATF2	P53296	535 aa		6.02	□□□□□ -1.45
SUP35	YDR172W	TY4B-H	P0C2J7	1802 aa		6.02	□□□□□ -1.45
SUP35	YDR172W	TY4B-J	P47024	1803 aa		6.02	□□□□□ -1.45
SUP35	YDR172W	CPS1	P27614	576 aa		6.02	□□□□□ -1.45
SUP35	YDR172W	THI12	P42883	340 aa		6.01	□□□□□ -1.45
SUP35	YDR172W	THI5	P43534	340 aa		6.01	□□□□□ -1.45
SUP35	YDR172W	THI11	P47183	340 aa		6.01	□□□□□ -1.45
SUP35	YDR172W	YDL144C	Q07589	356 aa		6.01	□□□□□ -1.45
SUP35	YDR172W	THI13	Q07748	340 aa		6.01	□□□□□ -1.45
SUP35	YDR172W	RVB2	Q12464	471 aa	Known RBP	6.01	□□□□□ -1.45
SUP35	YDR172W	CLB5	P30283	435 aa		6	□□□□□ -1.45
SUP35	YDR172W	TEA1	P47988	759 aa		6	□□□□□ -1.45
SUP35	YDR172W	RRP46	P53256	223 aa	Predicted RBP	6	□□□□□ -1.45
SUP35	YDR172W	HIM1	Q06674	414 aa		6	□□□□□ -1.45
SUP35	YDR172W	YPR015C	Q12531	247 aa		6	□□□□□ -1.45
SUP35	YDR172W	PTC2	P39966	464 aa	Known RBP	6	□□□□□ -1.45
SUP35	YDR172W	KIN1	P13185	1064 aa		5.99	□□□□□ -1.45
SUP35	YDR172W	VPS27	P40343	622 aa	Known RBP	5.99	□□□□□ -1.45
SUP35	YDR172W	MPP10	P47083	593 aa	Known RBP	5.99	□□□□□ -1.45
SUP35	YDR172W	YML082W	Q04533	649 aa	Known RBP	5.99	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms