RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W HST2P53686 357 aa5.22□□□□□ -1.57
CDC36YDL165W YPR204WQ08995 1032 aa5.22□□□□□ -1.57
CDC36YDL165W VAC17P25591 423 aa5.21□□□□□ -1.58
CDC36YDL165W ICP55P40051 511 aa5.21□□□□□ -1.58
CDC36YDL165W YJR098CP47139 656 aa5.21□□□□□ -1.58
CDC36YDL165W DLD1P32891 587 aa5.2□□□□□ -1.58
CDC36YDL165W MMP1Q12372 583 aa5.2□□□□□ -1.58
CDC36YDL165W ROG3P43602 733 aa5.19□□□□□ -1.58
CDC36YDL165W SAS10Q12136 610 aaPredicted RBP5.19□□□□□ -1.58
CDC36YDL165W TCB1Q12466 1186 aa5.19□□□□□ -1.58
CDC36YDL165W TY1A-MR1Q04215 440 aa5.18□□□□□ -1.58
CDC36YDL165W CCP1P00431 361 aa5.17□□□□□ -1.58
CDC36YDL165W SPB4P25808 606 aaPredicted RBP5.17□□□□□ -1.58
CDC36YDL165W OSH7P38755 437 aa5.17□□□□□ -1.58
CDC36YDL165W ITT1Q04638 464 aa5.17□□□□□ -1.58
CDC36YDL165W PUS1Q12211 544 aaKnown RBP5.17□□□□□ -1.58
CDC36YDL165W DPH6Q12429 685 aa5.17□□□□□ -1.58
CDC36YDL165W GLN1P32288 370 aaKnown RBP5.16□□□□□ -1.58
CDC36YDL165W LSB3P43603 459 aaKnown RBP5.16□□□□□ -1.58
CDC36YDL165W APP1P53933 587 aa5.16□□□□□ -1.58
CDC36YDL165W ESS1P22696 170 aa5.15□□□□□ -1.59
CDC36YDL165W EMW1P42842 904 aaKnown RBP5.15□□□□□ -1.59
CDC36YDL165W YJU3P28321 313 aa5.13□□□□□ -1.59
CDC36YDL165W PHM7Q12252 991 aa5.13□□□□□ -1.59
CDC36YDL165W MDJ1P35191 511 aa5.12□□□□□ -1.59
CDC36YDL165W LYS5P50113 272 aa5.12□□□□□ -1.59
CDC36YDL165W RSC30P38781 883 aa5.11□□□□□ -1.59
CDC36YDL165W JJJ3P47138 172 aa5.1□□□□□ -1.59
CDC36YDL165W NAM8Q00539 523 aaKnown RBP5.09□□□□□ -1.59
CDC36YDL165W DFG5Q05031 458 aa5.09□□□□□ -1.59
CDC36YDL165W ATF2P53296 535 aa5.08□□□□□ -1.6
CDC36YDL165W MKS1P34072 584 aa5.07□□□□□ -1.6
CDC36YDL165W CDC19P00549 500 aaKnown RBP5.06□□□□□ -1.6
CDC36YDL165W FIG4P42837 879 aa5.06□□□□□ -1.6
CDC36YDL165W NSG2P53898 299 aa5.06□□□□□ -1.6
CDC36YDL165W KTR1P27810 393 aaKnown RBP5.04□□□□□ -1.6
CDC36YDL165W PKH3Q03306 898 aaPredicted RBP5.04□□□□□ -1.6
CDC36YDL165W YFL066CP43538 392 aa5.03□□□□□ -1.6
CDC36YDL165W BDS1Q08347 646 aa5.03□□□□□ -1.6
CDC36YDL165W THI72Q08579 599 aa5.03□□□□□ -1.6
CDC36YDL165W ARG8P18544 423 aa5.02□□□□□ -1.61
CDC36YDL165W AI1P03875 834 aa5.01□□□□□ -1.61
CDC36YDL165W STE6P12866 1290 aa5.01□□□□□ -1.61
CDC36YDL165W FBP26P32604 452 aa5.01□□□□□ -1.61
CDC36YDL165W VTC4P47075 721 aa5.01□□□□□ -1.61
CDC36YDL165W CCT8P47079 568 aaKnown RBP5.01□□□□□ -1.61
CDC36YDL165W NRD1P53617 575 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CDC36YDL165W CUZ1P53899 274 aa5□□□□□ -1.61
CDC36YDL165W GLC3P32775 704 aa4.99□□□□□ -1.61
CDC36YDL165W DMA1P38823 416 aa4.99□□□□□ -1.61
CDC36YDL165W YNR021WP53723 404 aaKnown RBP4.99□□□□□ -1.61
CDC36YDL165W TEC1P18412 486 aa4.98□□□□□ -1.61
CDC36YDL165W YPR084WQ06821 456 aa4.98□□□□□ -1.61
CDC36YDL165W CEM1P39525 442 aa4.97□□□□□ -1.61
CDC36YDL165W DAL1P32375 460 aa4.96□□□□□ -1.62
CDC36YDL165W ISU1Q03020 165 aa4.94□□□□□ -1.62
CDC36YDL165W RAD59Q12223 238 aa4.94□□□□□ -1.62
CDC36YDL165W YPR053CQ6Q5F3 151 aa4.94□□□□□ -1.62
CDC36YDL165W CSN12P47130 423 aa4.93□□□□□ -1.62
CDC36YDL165W SYT1Q06836 1226 aa4.92□□□□□ -1.62
CDC36YDL165W ATG20Q07528 640 aa4.92□□□□□ -1.62
CDC36YDL165W DIT1P21623 536 aa4.91□□□□□ -1.62
CDC36YDL165W SKN7P38889 622 aa4.91□□□□□ -1.62
CDC36YDL165W SBE2P42223 864 aaKnown RBP4.91□□□□□ -1.62
CDC36YDL165W ADE12P80210 433 aaKnown RBP4.91□□□□□ -1.62
CDC36YDL165W YMR265CQ03508 461 aaKnown RBP4.91□□□□□ -1.62
CDC36YDL165W GUT2P32191 649 aa4.9□□□□□ -1.63
CDC36YDL165W DLD3P39976 496 aaKnown RBP4.9□□□□□ -1.63
CDC36YDL165W UBP15P50101 1230 aa4.9□□□□□ -1.63
CDC36YDL165W TDA6Q06466 467 aa4.9□□□□□ -1.63
CDC36YDL165W AIM7Q12156 149 aa4.9□□□□□ -1.63
CDC36YDL165W SBP1P10080 294 aaKnown RBP4.89□□□□□ -1.63
CDC36YDL165W SLA1P32790 1244 aa4.88□□□□□ -1.63
CDC36YDL165W KRE33P53914 1056 aaKnown RBP4.88□□□□□ -1.63
CDC36YDL165W YDR461C-AQ2V2P7 80 aa4.88□□□□□ -1.63
CDC36YDL165W RPP2BP02400 110 aaKnown RBP4.87□□□□□ -1.63
CDC36YDL165W MAK16P10962 306 aaPredicted RBP4.87□□□□□ -1.63
CDC36YDL165W YMR187CQ03236 431 aa4.87□□□□□ -1.63
CDC36YDL165W TY1A-DR3Q12441 440 aa4.87□□□□□ -1.63
CDC36YDL165W SSN3P39073 555 aa4.86□□□□□ -1.63
CDC36YDL165W MSN5P52918 1224 aa4.86□□□□□ -1.63
CDC36YDL165W WTM2Q12206 467 aa4.86□□□□□ -1.63
CDC36YDL165W STE20Q03497 939 aaKnown RBP4.85□□□□□ -1.63
CDC36YDL165W FRA1Q07825 749 aa4.85□□□□□ -1.63
CDC36YDL165W MCX1P38323 520 aaPredicted RBP4.83□□□□□ -1.64
CDC36YDL165W YNR014WP53719 212 aa4.83□□□□□ -1.64
CDC36YDL165W NAF1P53919 492 aaKnown RBP4.83□□□□□ -1.64
CDC36YDL165W YCK2P23292 546 aaKnown RBP4.81□□□□□ -1.64
CDC36YDL165W AHP1P38013 176 aaKnown RBP4.81□□□□□ -1.64
CDC36YDL165W GPM1P00950 247 aaKnown RBP4.8□□□□□ -1.64
CDC36YDL165W SPT2P06843 333 aaPredicted RBP4.8□□□□□ -1.64
CDC36YDL165W DAT1P13483 248 aaKnown RBP4.8□□□□□ -1.64
CDC36YDL165W ISR1Q06098 443 aaKnown RBP4.8□□□□□ -1.64
CDC36YDL165W UTR2P32623 467 aa4.79□□□□□ -1.64
CDC36YDL165W BOI2P39969 1040 aa4.78□□□□□ -1.64
CDC36YDL165W UTP7P40055 554 aaKnown RBP4.78□□□□□ -1.64
CDC36YDL165W APL6P46682 809 aa4.78□□□□□ -1.64
CDC36YDL165W YDR215CQ12240 137 aa4.78□□□□□ -1.64
CDC36YDL165W SSA2P10592 639 aaKnown RBP4.77□□□□□ -1.65
CDC36YDL165W SLN1P39928 1220 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms