RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W EDE1P34216 1381 aa8.75□□□□□ -1.01
CDC7YDL017W XKS1P42826 600 aa8.75□□□□□ -1.01
CDC7YDL017W PUF6Q04373 656 aaKnown RBP8.75□□□□□ -1.01
CDC7YDL017W TCB1Q12466 1186 aa8.75□□□□□ -1.01
CDC7YDL017W URB1P34241 1764 aaKnown RBP8.74□□□□□ -1.01
CDC7YDL017W FKS3Q04952 1785 aa8.74□□□□□ -1.01
CDC7YDL017W RCR1P38212 213 aa8.74□□□□□ -1.01
CDC7YDL017W YFR016CP43597 1233 aaKnown RBP8.73□□□□□ -1.01
CDC7YDL017W BMS1Q08965 1183 aaKnown RBP8.73□□□□□ -1.01
CDC7YDL017W TRP5P00931 707 aaKnown RBP8.72□□□□□ -1.01
CDC7YDL017W PRY3P47033 881 aa8.72□□□□□ -1.01
CDC7YDL017W COQ4O13525 335 aa8.71□□□□□ -1.01
CDC7YDL017W YBR287WP38355 427 aa8.71□□□□□ -1.01
CDC7YDL017W RSF2P46974 1380 aa8.71□□□□□ -1.02
CDC7YDL017W UGA3P26370 528 aa8.7□□□□□ -1.02
CDC7YDL017W YPP1P46951 817 aa8.7□□□□□ -1.02
CDC7YDL017W AAD16Q02895 342 aa8.7□□□□□ -1.02
CDC7YDL017W YIR014WP40570 242 aa8.7□□□□□ -1.02
CDC7YDL017W NSE3Q05541 303 aa8.7□□□□□ -1.02
CDC7YDL017W NUP145P49687 1317 aa8.69□□□□□ -1.02
CDC7YDL017W KCC4P25389 1037 aa8.69□□□□□ -1.02
CDC7YDL017W OPY1P38271 328 aa8.69□□□□□ -1.02
CDC7YDL017W CSI1Q04368 295 aa8.69□□□□□ -1.02
CDC7YDL017W INP54Q08227 384 aaKnown RBP8.69□□□□□ -1.02
CDC7YDL017W LYS2P07702 1392 aa8.68□□□□□ -1.02
CDC7YDL017W ILV3P39522 585 aaKnown RBP8.68□□□□□ -1.02
CDC7YDL017W RPS19AP07280 144 aaKnown RBP8.67□□□□□ -1.02
CDC7YDL017W RPS19BP07281 144 aaPredicted RBP8.67□□□□□ -1.02
CDC7YDL017W REB1P21538 810 aa8.67□□□□□ -1.02
CDC7YDL017W YOL057WQ08225 711 aa8.66□□□□□ -1.02
CDC7YDL017W ENT1Q12518 454 aa8.66□□□□□ -1.02
CDC7YDL017W IME2P32581 645 aa8.65□□□□□ -1.02
CDC7YDL017W YNG2P38806 282 aaKnown RBP8.65□□□□□ -1.02
CDC7YDL017W RPL17AP05740 184 aaKnown RBP8.64□□□□□ -1.03
CDC7YDL017W RAD4P14736 754 aa8.64□□□□□ -1.03
CDC7YDL017W IES2P40154 320 aa8.64□□□□□ -1.03
CDC7YDL017W RPL17BP46990 184 aaKnown RBP8.64□□□□□ -1.03
CDC7YDL017W SPO1P53541 631 aa8.64□□□□□ -1.03
CDC7YDL017W ADE16P54113 591 aaKnown RBP8.64□□□□□ -1.03
CDC7YDL017W RAD24P32641 659 aa8.63□□□□□ -1.03
CDC7YDL017W ECM16Q04217 1267 aaKnown RBP8.63□□□□□ -1.03
CDC7YDL017W OSM1P21375 501 aaKnown RBP8.62□□□□□ -1.03
CDC7YDL017W YGR122WP53272 402 aa8.62□□□□□ -1.03
CDC7YDL017W MEC3Q02574 474 aa8.62□□□□□ -1.03
CDC7YDL017W YDR306CQ06640 478 aa8.62□□□□□ -1.03
CDC7YDL017W ALE1Q08548 619 aa8.62□□□□□ -1.03
CDC7YDL017W ENV9Q08651 330 aa8.62□□□□□ -1.03
CDC7YDL017W MRP7P12687 371 aa8.61□□□□□ -1.03
CDC7YDL017W NOP8Q08287 484 aaPredicted RBP8.6□□□□□ -1.03
CDC7YDL017W GCD7P32502 381 aaPredicted RBP8.59□□□□□ -1.03
CDC7YDL017W YKL133CP36066 463 aa8.59□□□□□ -1.03
CDC7YDL017W APP1P53933 587 aa8.59□□□□□ -1.03
CDC7YDL017W NMD2P38798 1089 aaKnown RBP8.59□□□□□ -1.03
CDC7YDL017W BOI2P39969 1040 aa8.59□□□□□ -1.03
CDC7YDL017W ZDS2P54786 942 aa8.59□□□□□ -1.03
CDC7YDL017W NKP2Q06162 153 aa8.59□□□□□ -1.03
CDC7YDL017W YAH1Q12184 172 aaKnown RBP8.59□□□□□ -1.03
CDC7YDL017W YRF1-3P0CX14 1859 aa8.58□□□□□ -1.04
CDC7YDL017W YRF1-7P0CX15 1859 aa8.58□□□□□ -1.04
CDC7YDL017W YRF1-6P53819 1859 aa8.58□□□□□ -1.04
CDC7YDL017W SWC3P31376 625 aa8.58□□□□□ -1.04
CDC7YDL017W FRK1Q03002 865 aaPredicted RBP8.58□□□□□ -1.04
CDC7YDL017W DNM1P54861 757 aa8.57□□□□□ -1.04
CDC7YDL017W RFC1P38630 861 aaKnown RBP8.56□□□□□ -1.04
CDC7YDL017W CST6P40535 587 aa8.56□□□□□ -1.04
CDC7YDL017W YJR008WP47085 338 aa8.56□□□□□ -1.04
CDC7YDL017W HGH1P48362 394 aaKnown RBP8.56□□□□□ -1.04
CDC7YDL017W ATG13Q06628 738 aa8.56□□□□□ -1.04
CDC7YDL017W RAD50P12753 1312 aa8.56□□□□□ -1.04
CDC7YDL017W PCT1P13259 424 aa8.55□□□□□ -1.04
CDC7YDL017W YBP2P53169 641 aa8.55□□□□□ -1.04
CDC7YDL017W CDC16P09798 840 aa8.54□□□□□ -1.04
CDC7YDL017W NUP133P36161 1157 aa8.54□□□□□ -1.04
CDC7YDL017W RMT2Q03305 412 aa8.54□□□□□ -1.04
CDC7YDL017W SWI1P09547 1314 aa8.54□□□□□ -1.04
CDC7YDL017W ROM2P51862 1356 aaKnown RBP8.54□□□□□ -1.04
CDC7YDL017W IMH1Q06704 911 aaKnown RBP8.54□□□□□ -1.04
CDC7YDL017W EAF7P53911 425 aaKnown RBP8.52□□□□□ -1.05
CDC7YDL017W GCR2Q01722 534 aa8.52□□□□□ -1.05
CDC7YDL017W NOP53Q12080 455 aaKnown RBP8.52□□□□□ -1.05
CDC7YDL017W DLD1P32891 587 aa8.51□□□□□ -1.05
CDC7YDL017W SSP2Q08646 371 aa8.51□□□□□ -1.05
CDC7YDL017W TUM1Q08686 304 aaKnown RBP8.51□□□□□ -1.05
CDC7YDL017W BRN1P38170 754 aa8.5□□□□□ -1.05
CDC7YDL017W UBP12P39538 1254 aa8.5□□□□□ -1.05
CDC7YDL017W DOT5P40553 215 aa8.5□□□□□ -1.05
CDC7YDL017W VPS64Q03944 604 aa8.5□□□□□ -1.05
CDC7YDL017W COBP00163 385 aa8.49□□□□□ -1.05
CDC7YDL017W LPD1P09624 499 aaKnown RBP8.49□□□□□ -1.05
CDC7YDL017W APL2P36000 726 aaPredicted RBP8.49□□□□□ -1.05
CDC7YDL017W SET1P38827 1080 aaKnown RBP8.49□□□□□ -1.05
CDC7YDL017W FOX2Q02207 900 aaKnown RBP8.49□□□□□ -1.05
CDC7YDL017W YPR204WQ08995 1032 aa8.49□□□□□ -1.05
CDC7YDL017W BDP1P46678 594 aa8.49□□□□□ -1.05
CDC7YDL017W RLF2Q12495 606 aa8.49□□□□□ -1.05
CDC7YDL017W CLC1P17891 233 aa8.48□□□□□ -1.05
CDC7YDL017W GRX1P25373 110 aaKnown RBP8.48□□□□□ -1.05
CDC7YDL017W YKR075CP36155 307 aa8.48□□□□□ -1.05
CDC7YDL017W SNF7P39929 240 aaKnown RBP8.48□□□□□ -1.05
CDC7YDL017W YLR271WQ06152 274 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms