RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeastyeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNE1YAL058W SIS1P25294 352 aaKnown RBP7.6□□□□□ -1.19
CNE1YAL058W ROM2P51862 1356 aaKnown RBP7.6□□□□□ -1.19
CNE1YAL058W MRM1P25270 412 aa7.59□□□□□ -1.19
CNE1YAL058W IME2P32581 645 aa7.59□□□□□ -1.19
CNE1YAL058W IES2P40154 320 aa7.59□□□□□ -1.19
CNE1YAL058W FKS3Q04952 1785 aa7.59□□□□□ -1.2
CNE1YAL058W OPY1P38271 328 aa7.58□□□□□ -1.2
CNE1YAL058W SLM3Q12093 417 aa7.58□□□□□ -1.2
CNE1YAL058W EDE1P34216 1381 aa7.58□□□□□ -1.2
CNE1YAL058W UBP1P25037 809 aa7.57□□□□□ -1.2
CNE1YAL058W YIL177CP40434 1758 aa7.57□□□□□ -1.2
CNE1YAL058W YJL225CP40889 1758 aa7.57□□□□□ -1.2
CNE1YAL058W DMA1P38823 416 aa7.57□□□□□ -1.2
CNE1YAL058W MGA2P40578 1113 aa7.57□□□□□ -1.2
CNE1YAL058W MPP10P47083 593 aaKnown RBP7.57□□□□□ -1.2
CNE1YAL058W YPR148CQ06523 435 aa7.57□□□□□ -1.2
CNE1YAL058W YBL029C-AQ3E756 94 aa7.57□□□□□ -1.2
CNE1YAL058W APC1P53886 1748 aa7.56□□□□□ -1.2
CNE1YAL058W YFR016CP43597 1233 aaKnown RBP7.56□□□□□ -1.2
CNE1YAL058W IOC4Q04213 475 aa7.56□□□□□ -1.2
CNE1YAL058W FPR3P38911 411 aaKnown RBP7.55□□□□□ -1.2
CNE1YAL058W RTF1P53064 558 aa7.55□□□□□ -1.2
CNE1YAL058W PDI1P17967 522 aaKnown RBP7.54□□□□□ -1.2
CNE1YAL058W CST9Q06032 482 aa7.54□□□□□ -1.2
CNE1YAL058W DPS1P04802 557 aaKnown RBP7.53□□□□□ -1.2
CNE1YAL058W DOT5P40553 215 aa7.53□□□□□ -1.2
CNE1YAL058W XKS1P42826 600 aa7.53□□□□□ -1.2
CNE1YAL058W RPN11P43588 306 aaKnown RBP7.53□□□□□ -1.2
CNE1YAL058W RRP46P53256 223 aaPredicted RBP7.53□□□□□ -1.2
CNE1YAL058W YKL133CP36066 463 aa7.52□□□□□ -1.21
CNE1YAL058W YJL181WP46987 611 aa7.52□□□□□ -1.21
CNE1YAL058W YRB30P53107 440 aaPredicted RBP7.52□□□□□ -1.21
CNE1YAL058W FOX2Q02207 900 aaKnown RBP7.52□□□□□ -1.21
CNE1YAL058W YRF1-3P0CX14 1859 aa7.52□□□□□ -1.21
CNE1YAL058W YRF1-7P0CX15 1859 aa7.52□□□□□ -1.21
CNE1YAL058W YRF1-6P53819 1859 aa7.52□□□□□ -1.21
CNE1YAL058W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
CNE1YAL058W LAM6Q08001 693 aa7.51□□□□□ -1.21
CNE1YAL058W PRP40P33203 583 aaKnown RBP7.5□□□□□ -1.21
CNE1YAL058W LEO1P38439 464 aa7.5□□□□□ -1.21
CNE1YAL058W RTR1P40084 226 aaPredicted RBP7.5□□□□□ -1.21
CNE1YAL058W SAP155P43612 1002 aa7.5□□□□□ -1.21
CNE1YAL058W GAS4Q08271 471 aa7.5□□□□□ -1.21
CNE1YAL058W CLC1P17891 233 aa7.49□□□□□ -1.21
CNE1YAL058W GRX4P32642 244 aa7.49□□□□□ -1.21
CNE1YAL058W GTT3P39996 337 aa7.49□□□□□ -1.21
CNE1YAL058W VNX1P42839 908 aa7.49□□□□□ -1.21
CNE1YAL058W SIR4P11978 1358 aa7.49□□□□□ -1.21
CNE1YAL058W TAP42Q04372 366 aa7.48□□□□□ -1.21
CNE1YAL058W YRF1-4O13559 1382 aa7.48□□□□□ -1.21
CNE1YAL058W MEC3Q02574 474 aa7.47□□□□□ -1.21
CNE1YAL058W COBP00163 385 aa7.47□□□□□ -1.21
CNE1YAL058W YIR014WP40570 242 aa7.47□□□□□ -1.21
CNE1YAL058W EAF7P53911 425 aaKnown RBP7.47□□□□□ -1.21
CNE1YAL058W WSC3Q12215 556 aa7.47□□□□□ -1.21
CNE1YAL058W AUS1Q08409 1394 aa7.47□□□□□ -1.21
CNE1YAL058W TPD3P31383 635 aa7.46□□□□□ -1.22
CNE1YAL058W THI22Q06490 572 aa7.46□□□□□ -1.22
CNE1YAL058W PIB1Q06651 286 aa7.46□□□□□ -1.22
CNE1YAL058W DAL5P15365 543 aa7.45□□□□□ -1.22
CNE1YAL058W KAR2P16474 682 aaKnown RBP7.45□□□□□ -1.22
CNE1YAL058W YBL086CP38177 466 aa7.45□□□□□ -1.22
CNE1YAL058W YIL092WP40497 633 aa7.45□□□□□ -1.22
CNE1YAL058W RAD2P07276 1031 aa7.44□□□□□ -1.22
CNE1YAL058W NPR2P39923 615 aa7.44□□□□□ -1.22
CNE1YAL058W HEF3P53978 1044 aaKnown RBP7.44□□□□□ -1.22
CNE1YAL058W FRK1Q03002 865 aaPredicted RBP7.44□□□□□ -1.22
CNE1YAL058W SPP1Q03012 353 aa7.44□□□□□ -1.22
CNE1YAL058W PRD1P25375 712 aa7.43□□□□□ -1.22
CNE1YAL058W YKR075CP36155 307 aa7.43□□□□□ -1.22
CNE1YAL058W UGA2P38067 497 aa7.43□□□□□ -1.22
CNE1YAL058W HIM1Q06674 414 aa7.43□□□□□ -1.22
CNE1YAL058W RCR1P38212 213 aa7.42□□□□□ -1.22
CNE1YAL058W POL32P47110 350 aa7.42□□□□□ -1.22
CNE1YAL058W YMR1P47147 688 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
CNE1YAL058W ALD2P47771 506 aa7.42□□□□□ -1.22
CNE1YAL058W RPO41P13433 1351 aaKnown RBP7.42□□□□□ -1.22
CNE1YAL058W LYS4P49367 693 aaPredicted RBP7.42□□□□□ -1.22
CNE1YAL058W ADE16P54113 591 aaKnown RBP7.42□□□□□ -1.22
CNE1YAL058W VPS29P38759 282 aa7.41□□□□□ -1.22
CNE1YAL058W SNF7P39929 240 aaKnown RBP7.41□□□□□ -1.22
CNE1YAL058W RTT109Q07794 436 aa7.41□□□□□ -1.22
CNE1YAL058W SSA2P10592 639 aaKnown RBP7.4□□□□□ -1.22
CNE1YAL058W PCT1P13259 424 aa7.4□□□□□ -1.22
CNE1YAL058W PAP2P53632 584 aaKnown RBP7.4□□□□□ -1.22
CNE1YAL058W ATG13Q06628 738 aa7.4□□□□□ -1.22
CNE1YAL058W RIM15P43565 1770 aa7.4□□□□□ -1.23
CNE1YAL058W BUD27P43573 796 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
CNE1YAL058W DBP1P24784 617 aaKnown RBP7.38□□□□□ -1.23
CNE1YAL058W DJP1P40564 432 aa7.38□□□□□ -1.23
CNE1YAL058W TIF11P38912 153 aaKnown RBP7.37□□□□□ -1.23
CNE1YAL058W ROX1P25042 368 aa7.37□□□□□ -1.23
CNE1YAL058W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
CNE1YAL058W CTH1P47976 325 aa7.37□□□□□ -1.23
CNE1YAL058W INP54Q08227 384 aaKnown RBP7.37□□□□□ -1.23
CNE1YAL058W MSB4Q12317 492 aa7.37□□□□□ -1.23
CNE1YAL058W CAB3P36076 571 aa7.36□□□□□ -1.23
CNE1YAL058W PUF6Q04373 656 aaKnown RBP7.36□□□□□ -1.23
CNE1YAL058W GRX1P25373 110 aaKnown RBP7.34□□□□□ -1.23
CNE1YAL058W EBP2P36049 427 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 232 ms