RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	PPP1R3G	B7ZBB8	358 aa		11.73	□□□□□ -0.53
CASC19-256	ENST00000641746	COL9A1	P20849	921 aa		11.72	□□□□□ -0.53
CASC19-256	ENST00000641746	PROX2	Q3B8N5	592 aa		11.72	□□□□□ -0.53
CASC19-256	ENST00000641746	CC2D2A	Q9P2K1	1620 aa		11.69	□□□□□ -0.54
CASC19-256	ENST00000641746	ANKK1	Q8NFD2	765 aa		11.69	□□□□□ -0.54
CASC19-256	ENST00000641746	ITGBL1	O95965	494 aa	Predicted RBP	11.68	□□□□□ -0.54
CASC19-256	ENST00000641746	DCAF8L2	P0C7V8	631 aa		11.68	□□□□□ -0.54
CASC19-256	ENST00000641746	TYW1B	Q6NUM6	668 aa		11.67	□□□□□ -0.54
CASC19-256	ENST00000641746	LAPTM4B	Q86VI4	370 aa		11.67	□□□□□ -0.54
CASC19-256	ENST00000641746	FBXW7	Q969H0	707 aa		11.67	□□□□□ -0.54
CASC19-256	ENST00000641746	PHF14	O94880	888 aa		11.66	□□□□□ -0.54
CASC19-256	ENST00000641746	SOWAHB	A6NEL2	793 aa		11.65	□□□□□ -0.54
CASC19-256	ENST00000641746	KIAA1468	Q9P260	1216 aa		11.65	□□□□□ -0.54
CASC19-256	ENST00000641746	NACAD	O15069	1562 aa		11.65	□□□□□ -0.54
CASC19-256	ENST00000641746	BICRA	Q9NZM4	1560 aa		11.64	□□□□□ -0.55
CASC19-256	ENST00000641746	BCAM	P50895	628 aa		11.64	□□□□□ -0.55
CASC19-256	ENST00000641746	ONECUT3	O60422	494 aa	Predicted RBP	11.63	□□□□□ -0.55
CASC19-256	ENST00000641746	CADPS2	Q86UW7	1296 aa		11.62	□□□□□ -0.55
CASC19-256	ENST00000641746	ZFR	Q96KR1	1074 aa	Known RBP	11.62	□□□□□ -0.55
CASC19-256	ENST00000641746	C6orf132	Q5T0Z8	1188 aa		11.6	□□□□□ -0.55
CASC19-256	ENST00000641746	NYAP1	Q6ZVC0	841 aa		11.6	□□□□□ -0.55
CASC19-256	ENST00000641746	WBP1L	Q9NX94	342 aa		11.59	□□□□□ -0.55
CASC19-256	ENST00000641746	EPAS1	Q99814	870 aa		11.58	□□□□□ -0.56
CASC19-256	ENST00000641746	CAMK2B	Q13554	666 aa		11.57	□□□□□ -0.56
CASC19-256	ENST00000641746	UNC13A	Q9UPW8	1703 aa		11.57	□□□□□ -0.56
CASC19-256	ENST00000641746	CUX2	O14529	1486 aa		11.57	□□□□□ -0.56
CASC19-256	ENST00000641746	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.56	□□□□□ -0.56
CASC19-256	ENST00000641746	KCNC4	Q03721	635 aa		11.55	□□□□□ -0.56
CASC19-256	ENST00000641746	TRIM6-TRIM34	B2RNG4	842 aa		11.54	□□□□□ -0.56
CASC19-256	ENST00000641746	DPYSL4	O14531	572 aa		11.52	□□□□□ -0.57
CASC19-256	ENST00000641746	FAM98C	Q17RN3	349 aa	Known RBP	11.52	□□□□□ -0.57
CASC19-256	ENST00000641746	TSR3	Q9UJK0	312 aa	Known RBP	11.5	□□□□□ -0.57
CASC19-256	ENST00000641746	RBM33	Q96EV2	1170 aa	Known RBP	11.49	□□□□□ -0.57
CASC19-256	ENST00000641746	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.49	□□□□□ -0.57
CASC19-256	ENST00000641746		Q6ZNB5	142 aa		11.48	□□□□□ -0.57
CASC19-256	ENST00000641746	DDX12P	Q92771	950 aa		11.47	□□□□□ -0.57
CASC19-256	ENST00000641746	HPS5	Q9UPZ3	1129 aa		11.47	□□□□□ -0.57
CASC19-256	ENST00000641746	LRCH3	Q96II8	777 aa		11.46	□□□□□ -0.57
CASC19-256	ENST00000641746	EIF4G1	Q04637	1599 aa	Known RBP	11.45	□□□□□ -0.58
CASC19-256	ENST00000641746	TSKS	Q9UJT2	592 aa		11.44	□□□□□ -0.58
CASC19-256	ENST00000641746	PACS2	Q86VP3	889 aa		11.43	□□□□□ -0.58
CASC19-256	ENST00000641746	EN1	Q05925	392 aa	Predicted RBP	11.41	□□□□□ -0.58
CASC19-256	ENST00000641746	TSR1	Q2NL82	804 aa	Known RBP	11.4	□□□□□ -0.58
CASC19-256	ENST00000641746	LAPTM4A	Q15012	233 aa		11.39	□□□□□ -0.59
CASC19-256	ENST00000641746	PPP4C	P60510	307 aa		11.38	□□□□□ -0.59
CASC19-256	ENST00000641746	TJAP1	Q5JTD0	557 aa		11.38	□□□□□ -0.59
CASC19-256	ENST00000641746	MAP3K7	O43318	606 aa		11.37	□□□□□ -0.59
CASC19-256	ENST00000641746	NBR1	Q14596	966 aa		11.37	□□□□□ -0.59
CASC19-256	ENST00000641746	LCE2B	O14633	110 aa		11.36	□□□□□ -0.59
CASC19-256	ENST00000641746	PDIA6	Q15084	440 aa		11.36	□□□□□ -0.59
CASC19-256	ENST00000641746	ERCC6	Q03468	1493 aa		11.36	□□□□□ -0.59
CASC19-256	ENST00000641746	GFRA3	O60609	400 aa		11.35	□□□□□ -0.59
CASC19-256	ENST00000641746	FAM198A	Q9UFP1	575 aa		11.35	□□□□□ -0.59
CASC19-256	ENST00000641746	SAMD7	Q7Z3H4	446 aa		11.34	□□□□□ -0.59
CASC19-256	ENST00000641746	CDCA7L	Q96GN5	454 aa		11.34	□□□□□ -0.59
CASC19-256	ENST00000641746	SHROOM4	Q9ULL8	1493 aa		11.33	□□□□□ -0.6
CASC19-256	ENST00000641746	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.33	□□□□□ -0.6
CASC19-256	ENST00000641746	SMAP	O00193	183 aa		11.33	□□□□□ -0.6
CASC19-256	ENST00000641746	PRSS12	P56730	875 aa		11.33	□□□□□ -0.6
CASC19-256	ENST00000641746	TRAF7	Q6Q0C0	670 aa		11.33	□□□□□ -0.6
CASC19-256	ENST00000641746	C3orf80	F5H4A9	247 aa		11.31	□□□□□ -0.6
CASC19-256	ENST00000641746	PRIM1	P49642	420 aa	Known RBP	11.3	□□□□□ -0.6
CASC19-256	ENST00000641746	PRKD2	Q9BZL6	878 aa		11.3	□□□□□ -0.6
CASC19-256	ENST00000641746	CERK	Q8TCT0	537 aa		11.29	□□□□□ -0.6
CASC19-256	ENST00000641746	TATDN2	Q93075	761 aa		11.29	□□□□□ -0.6
CASC19-256	ENST00000641746	MTR	Q99707	1265 aa		11.29	□□□□□ -0.6
CASC19-256	ENST00000641746	PPP1R18	Q6NYC8	613 aa		11.28	□□□□□ -0.6
CASC19-256	ENST00000641746	IL21	Q9HBE4	155 aa		11.28	□□□□□ -0.6
CASC19-256	ENST00000641746	PNMA3	Q9UL41	463 aa		11.26	□□□□□ -0.61
CASC19-256	ENST00000641746		V9GY48	417 aa	Predicted RBP	11.26	□□□□□ -0.61
CASC19-256	ENST00000641746	ZNF516	Q92618	1163 aa		11.25	□□□□□ -0.61
CASC19-256	ENST00000641746	NRG2	O14511	850 aa	Predicted RBP	11.24	□□□□□ -0.61
CASC19-256	ENST00000641746	BBX	Q8WY36	941 aa	Predicted RBP	11.24	□□□□□ -0.61
CASC19-256	ENST00000641746	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.24	□□□□□ -0.61
CASC19-256	ENST00000641746	NBPF26	B4DH59	902 aa		11.23	□□□□□ -0.61
CASC19-256	ENST00000641746	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.23	□□□□□ -0.61
CASC19-256	ENST00000641746	GRXCR2	A6NFK2	248 aa		11.22	□□□□□ -0.61
CASC19-256	ENST00000641746	APLP1	P51693	650 aa		11.21	□□□□□ -0.61
CASC19-256	ENST00000641746	E2F4	Q16254	413 aa		11.21	□□□□□ -0.61
CASC19-256	ENST00000641746	NUDT18	Q6ZVK8	323 aa		11.21	□□□□□ -0.61
CASC19-256	ENST00000641746	OSBP	P22059	807 aa		11.2	□□□□□ -0.62
CASC19-256	ENST00000641746	HDGF	P51858	240 aa	Known RBP	11.2	□□□□□ -0.62
CASC19-256	ENST00000641746	NKX2-3	Q8TAU0	364 aa		11.19	□□□□□ -0.62
CASC19-256	ENST00000641746	CDHR5	Q9HBB8	845 aa		11.18	□□□□□ -0.62
CASC19-256	ENST00000641746	RBM27	Q9P2N5	1060 aa	Known RBP	11.18	□□□□□ -0.62
CASC19-256	ENST00000641746	TTC13	Q8NBP0	860 aa		11.16	□□□□□ -0.62
CASC19-256	ENST00000641746	MYO15B	Q96JP2	1530 aa		11.15	□□□□□ -0.62
CASC19-256	ENST00000641746	RNF40	O75150	1001 aa		11.14	□□□□□ -0.63
CASC19-256	ENST00000641746	SPRYD3	Q8NCJ5	442 aa		11.14	□□□□□ -0.63
CASC19-256	ENST00000641746	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.13	□□□□□ -0.63
CASC19-256	ENST00000641746	PDZRN3	Q9UPQ7	1066 aa		11.13	□□□□□ -0.63
CASC19-256	ENST00000641746	SWT1	Q5T5J6	900 aa	Known RBP	11.12	□□□□□ -0.63
CASC19-256	ENST00000641746	NECTIN2	Q92692	538 aa		11.11	□□□□□ -0.63
CASC19-256	ENST00000641746	GGCX	P38435	758 aa		11.1	□□□□□ -0.63
CASC19-256	ENST00000641746	COPS2	P61201	443 aa		11.1	□□□□□ -0.63
CASC19-256	ENST00000641746	TMUB1	Q9BVT8	246 aa		11.1	□□□□□ -0.63
CASC19-256	ENST00000641746	ZNF787	Q6DD87	383 aa		11.09	□□□□□ -0.63
CASC19-256	ENST00000641746	SLF2	Q8IX21	1173 aa		11.09	□□□□□ -0.63
CASC19-256	ENST00000641746	WDR70	Q9NW82	654 aa		11.09	□□□□□ -0.63
CASC19-256	ENST00000641746	PADI6	Q6TGC4	694 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms