RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ARHGEF5Q12774 1597 aa22.9■■□□□ 1.26
PHGDH-223ENST00000641597 PNISRQ8TF01 805 aaKnown RBP22.9■■□□□ 1.26
PHGDH-223ENST00000641597 TMC1Q8TDI8 760 aa22.89■■□□□ 1.25
PHGDH-223ENST00000641597 PREX2Q70Z35 1606 aa22.89■■□□□ 1.25
PHGDH-223ENST00000641597 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
PHGDH-223ENST00000641597 ARHGEF12Q9NZN5 1544 aa22.87■■□□□ 1.25
PHGDH-223ENST00000641597 PLA2R1Q13018 1463 aa22.86■■□□□ 1.25
PHGDH-223ENST00000641597 SALL2Q9Y467 1007 aaPredicted RBP22.86■■□□□ 1.25
PHGDH-223ENST00000641597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.85■■□□□ 1.256e-6■■■■■ 38.2
PHGDH-223ENST00000641597 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
PHGDH-223ENST00000641597 CCDC144AA2RUR9 1427 aa22.84■■□□□ 1.25
PHGDH-223ENST00000641597 ARID4BQ4LE39 1312 aaPredicted RBP22.81■■□□□ 1.24
PHGDH-223ENST00000641597 PRAG1Q86YV5 1406 aa22.8■■□□□ 1.24
PHGDH-223ENST00000641597 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
PHGDH-223ENST00000641597 SMG6Q86US8 1419 aaKnown RBP22.79■■□□□ 1.24
PHGDH-223ENST00000641597 A2MP01023 1474 aa22.77■■□□□ 1.24
PHGDH-223ENST00000641597 ERICH6BQ5W0A0 696 aa22.76■■□□□ 1.23
PHGDH-223ENST00000641597 RSPH4AQ5TD94 716 aa22.75■■□□□ 1.23
PHGDH-223ENST00000641597 TRPM1Q7Z4N2 1603 aa22.75■■□□□ 1.23
PHGDH-223ENST00000641597 CC2D1BQ5T0F9 858 aaKnown RBP22.74■■□□□ 1.23
PHGDH-223ENST00000641597 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
PHGDH-223ENST00000641597 MYBBP1AQ9BQG0 1328 aaKnown RBP22.74■■□□□ 1.23
PHGDH-223ENST00000641597 TESK2Q96S53 571 aa22.71■■□□□ 1.23
PHGDH-223ENST00000641597 SHROOM2Q13796 1616 aa22.7■■□□□ 1.23
PHGDH-223ENST00000641597 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
PHGDH-223ENST00000641597 E9PCH4 1651 aa22.7■■□□□ 1.22
PHGDH-223ENST00000641597 UNC13BO14795 1591 aa22.7■■□□□ 1.22
PHGDH-223ENST00000641597 PER1O15534 1290 aaPredicted RBP22.7■■□□□ 1.22
PHGDH-223ENST00000641597 LRPPRCP42704 1394 aaKnown RBP22.7■■□□□ 1.22
PHGDH-223ENST00000641597 MYO5CQ9NQX4 1742 aa22.69■■□□□ 1.22
PHGDH-223ENST00000641597 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
PHGDH-223ENST00000641597 TRAPPC8Q9Y2L5 1435 aa22.68■■□□□ 1.22
PHGDH-223ENST00000641597 RALBP1Q15311 655 aa22.67■■□□□ 1.22
PHGDH-223ENST00000641597 BRD4O60885 1362 aaPredicted RBP22.66■■□□□ 1.22
PHGDH-223ENST00000641597 PANK3Q9H999 370 aa22.66■■□□□ 1.22
PHGDH-223ENST00000641597 RNF123Q5XPI4 1314 aa22.66■■□□□ 1.22
PHGDH-223ENST00000641597 MAST1Q9Y2H9 1570 aa22.65■■□□□ 1.22
PHGDH-223ENST00000641597 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
PHGDH-223ENST00000641597 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.22
PHGDH-223ENST00000641597 CDCA7LQ96GN5 454 aa22.64■■□□□ 1.21
PHGDH-223ENST00000641597 KTN1Q86UP2 1357 aaKnown RBP22.64■■□□□ 1.21
PHGDH-223ENST00000641597 IQGAP3Q86VI3 1631 aa22.63■■□□□ 1.21
PHGDH-223ENST00000641597 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
PHGDH-223ENST00000641597 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
PHGDH-223ENST00000641597 NLRP13Q86W25 1043 aa22.62■■□□□ 1.21
PHGDH-223ENST00000641597 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
PHGDH-223ENST00000641597 PLXNC1O60486 1568 aa22.62■■□□□ 1.21
PHGDH-223ENST00000641597 PLCH2O75038 1416 aa22.61■■□□□ 1.21
PHGDH-223ENST00000641597 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
PHGDH-223ENST00000641597 COL17A1Q9UMD9 1497 aaPredicted RBP22.6■■□□□ 1.21
PHGDH-223ENST00000641597 DUOX2Q9NRD8 1548 aa22.59■■□□□ 1.21
PHGDH-223ENST00000641597 PRDM15P57071 1507 aaPredicted RBP22.59■■□□□ 1.21
PHGDH-223ENST00000641597 ERBINQ96RT1 1412 aa22.59■■□□□ 1.21
PHGDH-223ENST00000641597 EXOC6Q8TAG9 804 aa22.55■■□□□ 1.2
PHGDH-223ENST00000641597 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
PHGDH-223ENST00000641597 MAGI2Q86UL8 1455 aa22.54■■□□□ 1.2
PHGDH-223ENST00000641597 ABCC1P33527 1531 aa22.54■■□□□ 1.2
PHGDH-223ENST00000641597 TMF1P82094 1093 aa22.53■■□□□ 1.2
PHGDH-223ENST00000641597 RRP1P56182 461 aaKnown RBP22.52■■□□□ 1.2
PHGDH-223ENST00000641597 PLIN1O60240 522 aa22.52■■□□□ 1.2
PHGDH-223ENST00000641597 RCAN3Q9UKA8 241 aa22.52■■□□□ 1.2
PHGDH-223ENST00000641597 MYT1LQ9UL68 1186 aa22.52■■□□□ 1.2
PHGDH-223ENST00000641597 ATP10AO60312 1499 aa22.49■■□□□ 1.19
PHGDH-223ENST00000641597 ERICH6Q7L0X2 663 aa22.48■■□□□ 1.19
PHGDH-223ENST00000641597 SKAP1Q86WV1 359 aa22.46■■□□□ 1.19
PHGDH-223ENST00000641597 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
PHGDH-223ENST00000641597 KIF3BO15066 747 aa22.45■■□□□ 1.19
PHGDH-223ENST00000641597 ADAMTS8Q9UP79 889 aa22.45■■□□□ 1.19
PHGDH-223ENST00000641597 LAMC1P11047 1609 aa22.44■■□□□ 1.18
PHGDH-223ENST00000641597 EIF2AK4Q9P2K8 1649 aaKnown RBP22.44■■□□□ 1.18
PHGDH-223ENST00000641597 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
PHGDH-223ENST00000641597 ZFYVE16Q7Z3T8 1539 aa22.43■■□□□ 1.18
PHGDH-223ENST00000641597 WDR7Q9Y4E6 1490 aa22.43■■□□□ 1.18
PHGDH-223ENST00000641597 MADDQ8WXG6 1647 aa22.43■■□□□ 1.18
PHGDH-223ENST00000641597 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
PHGDH-223ENST00000641597 RNF17Q9BXT8 1623 aaKnown RBP22.42■■□□□ 1.18
PHGDH-223ENST00000641597 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
PHGDH-223ENST00000641597 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
PHGDH-223ENST00000641597 UHRF1BP1LA0JNW5 1464 aa22.39■■□□□ 1.18
PHGDH-223ENST00000641597 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.17
PHGDH-223ENST00000641597 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
PHGDH-223ENST00000641597 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
PHGDH-223ENST00000641597 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
PHGDH-223ENST00000641597 WASHC2CQ9Y4E1 1318 aa22.37■■□□□ 1.17
PHGDH-223ENST00000641597 BLMP54132 1417 aaPredicted RBP22.37■■□□□ 1.17
PHGDH-223ENST00000641597 FANCAO15360 1455 aa22.37■■□□□ 1.17
PHGDH-223ENST00000641597 TRPM2O94759 1503 aa22.36■■□□□ 1.17
PHGDH-223ENST00000641597 C20orf194Q5TEA3 1177 aa22.36■■□□□ 1.17
PHGDH-223ENST00000641597 SPHKAPQ2M3C7 1700 aa22.35■■□□□ 1.17
PHGDH-223ENST00000641597 IQGAP1P46940 1657 aa22.35■■□□□ 1.17
PHGDH-223ENST00000641597 ADGRF5Q8IZF2 1346 aa22.35■■□□□ 1.17
PHGDH-223ENST00000641597 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
PHGDH-223ENST00000641597 PTPRTO14522 1441 aa22.33■■□□□ 1.17
PHGDH-223ENST00000641597 PLEKHH1Q9ULM0 1364 aa22.33■■□□□ 1.17
PHGDH-223ENST00000641597 CCDC146Q8IYE0 955 aa22.33■■□□□ 1.17
PHGDH-223ENST00000641597 CRBNQ96SW2 442 aa22.33■■□□□ 1.16
PHGDH-223ENST00000641597 ATP7AQ04656 1500 aa22.33■■□□□ 1.16
PHGDH-223ENST00000641597 CEP152O94986 1710 aa22.32■■□□□ 1.16
PHGDH-223ENST00000641597 RTEL1-TNFRSF6BF6WH68 1400 aa22.32■■□□□ 1.16
PHGDH-223ENST00000641597 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms