RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-222ENST00000641321 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
CASC19-222ENST00000641321 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
CASC19-222ENST00000641321 RGS20O76081 388 aa12.64□□□□□ -0.39
CASC19-222ENST00000641321 COL9A1P20849 921 aa12.63□□□□□ -0.39
CASC19-222ENST00000641321 PROX2Q3B8N5 592 aa12.62□□□□□ -0.39
CASC19-222ENST00000641321 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
CASC19-222ENST00000641321 LAPTM4BQ86VI4 370 aa12.59□□□□□ -0.39
CASC19-222ENST00000641321 EPAS1Q99814 870 aa12.59□□□□□ -0.39
CASC19-222ENST00000641321 A0A0G2JS52 829 aa12.58□□□□□ -0.4
CASC19-222ENST00000641321 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
CASC19-222ENST00000641321 C6orf132Q5T0Z8 1188 aa12.56□□□□□ -0.4
CASC19-222ENST00000641321 DPYSL4O14531 572 aa12.55□□□□□ -0.4
CASC19-222ENST00000641321 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
CASC19-222ENST00000641321 SOWAHBA6NEL2 793 aa12.52□□□□□ -0.41
CASC19-222ENST00000641321 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
CASC19-222ENST00000641321 NYAP1Q6ZVC0 841 aa12.51□□□□□ -0.41
CASC19-222ENST00000641321 ZFRQ96KR1 1074 aaKnown RBP12.51□□□□□ -0.41
CASC19-222ENST00000641321 BCAMP50895 628 aa12.5□□□□□ -0.41
CASC19-222ENST00000641321 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
CASC19-222ENST00000641321 TRIM6-TRIM34B2RNG4 842 aa12.48□□□□□ -0.41
CASC19-222ENST00000641321 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
CASC19-222ENST00000641321 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.41
CASC19-222ENST00000641321 DDX12PQ92771 950 aa12.45□□□□□ -0.42
CASC19-222ENST00000641321 SEPT9Q9UHD8 586 aaPredicted RBP12.45□□□□□ -0.42
CASC19-222ENST00000641321 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
CASC19-222ENST00000641321 PDIA6Q15084 440 aa12.43□□□□□ -0.42
CASC19-222ENST00000641321 WBP1LQ9NX94 342 aa12.43□□□□□ -0.42
CASC19-222ENST00000641321 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
CASC19-222ENST00000641321 LRCH3Q96II8 777 aa12.41□□□□□ -0.42
CASC19-222ENST00000641321 NBR1Q14596 966 aa12.4□□□□□ -0.42
CASC19-222ENST00000641321 PACS2Q86VP3 889 aa12.4□□□□□ -0.42
CASC19-222ENST00000641321 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.4□□□□□ -0.42
CASC19-222ENST00000641321 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
CASC19-222ENST00000641321 MAP3K7O43318 606 aa12.39□□□□□ -0.43
CASC19-222ENST00000641321 KCNC4Q03721 635 aa12.38□□□□□ -0.43
CASC19-222ENST00000641321 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
CASC19-222ENST00000641321 TSR3Q9UJK0 312 aaKnown RBP12.37□□□□□ -0.43
CASC19-222ENST00000641321 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
CASC19-222ENST00000641321 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
CASC19-222ENST00000641321 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
CASC19-222ENST00000641321 HPS5Q9UPZ3 1129 aa12.36□□□□□ -0.43
CASC19-222ENST00000641321 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
CASC19-222ENST00000641321 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
CASC19-222ENST00000641321 WDR70Q9NW82 654 aa12.33□□□□□ -0.44
CASC19-222ENST00000641321 E2F4Q16254 413 aa12.31□□□□□ -0.44
CASC19-222ENST00000641321 PPP4CP60510 307 aa12.3□□□□□ -0.44
CASC19-222ENST00000641321 CERKQ8TCT0 537 aa12.3□□□□□ -0.44
CASC19-222ENST00000641321 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
CASC19-222ENST00000641321 PRSS12P56730 875 aa12.29□□□□□ -0.44
CASC19-222ENST00000641321 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
CASC19-222ENST00000641321 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
CASC19-222ENST00000641321 NBPF26B4DH59 902 aa12.26□□□□□ -0.45
CASC19-222ENST00000641321 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
CASC19-222ENST00000641321 GRXCR2A6NFK2 248 aa12.23□□□□□ -0.45
CASC19-222ENST00000641321 SMAPO00193 183 aa12.23□□□□□ -0.45
CASC19-222ENST00000641321 Q6ZNB5 142 aa12.23□□□□□ -0.45
CASC19-222ENST00000641321 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
CASC19-222ENST00000641321 C3orf80F5H4A9 247 aa12.22□□□□□ -0.45
CASC19-222ENST00000641321 TATDN2Q93075 761 aa12.22□□□□□ -0.45
CASC19-222ENST00000641321 OSBPP22059 807 aa12.21□□□□□ -0.45
CASC19-222ENST00000641321 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
CASC19-222ENST00000641321 RNF40O75150 1001 aa12.2□□□□□ -0.46
CASC19-222ENST00000641321 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
CASC19-222ENST00000641321 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
CASC19-222ENST00000641321 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
CASC19-222ENST00000641321 LAPTM4AQ15012 233 aa12.19□□□□□ -0.46
CASC19-222ENST00000641321 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
CASC19-222ENST00000641321 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
CASC19-222ENST00000641321 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
CASC19-222ENST00000641321 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
CASC19-222ENST00000641321 CDHR5Q9HBB8 845 aa12.16□□□□□ -0.46
CASC19-222ENST00000641321 UNC13AQ9UPW8 1703 aa12.15□□□□□ -0.46
CASC19-222ENST00000641321 NUDT18Q6ZVK8 323 aa12.14□□□□□ -0.47
CASC19-222ENST00000641321 TTC13Q8NBP0 860 aa12.14□□□□□ -0.47
CASC19-222ENST00000641321 MTRQ99707 1265 aa12.14□□□□□ -0.47
CASC19-222ENST00000641321 IL21Q9HBE4 155 aa12.14□□□□□ -0.47
CASC19-222ENST00000641321 NACADO15069 1562 aa12.13□□□□□ -0.47
CASC19-222ENST00000641321 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
CASC19-222ENST00000641321 APLP1P51693 650 aa12.08□□□□□ -0.48
CASC19-222ENST00000641321 GFRA3O60609 400 aa12.07□□□□□ -0.48
CASC19-222ENST00000641321 PPP1R18Q6NYC8 613 aa12.07□□□□□ -0.48
CASC19-222ENST00000641321 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
CASC19-222ENST00000641321 ZNF516Q92618 1163 aa12.07□□□□□ -0.48
CASC19-222ENST00000641321 GGCXP38435 758 aa12.06□□□□□ -0.48
CASC19-222ENST00000641321 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
CASC19-222ENST00000641321 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
CASC19-222ENST00000641321 PADI6Q6TGC4 694 aa12.05□□□□□ -0.48
CASC19-222ENST00000641321 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
CASC19-222ENST00000641321 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
CASC19-222ENST00000641321 SWT1Q5T5J6 900 aaKnown RBP12.03□□□□□ -0.48
CASC19-222ENST00000641321 PRR14Q9BWN1 585 aa12.03□□□□□ -0.48
CASC19-222ENST00000641321 LCE2BO14633 110 aa12.02□□□□□ -0.49
CASC19-222ENST00000641321 EYA1Q99502 592 aa12.02□□□□□ -0.49
CASC19-222ENST00000641321 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
CASC19-222ENST00000641321 NRG2O14511 850 aaPredicted RBP11.99□□□□□ -0.49
CASC19-222ENST00000641321 NKX2-3Q8TAU0 364 aa11.99□□□□□ -0.49
CASC19-222ENST00000641321 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
CASC19-222ENST00000641321 COPS2P61201 443 aa11.97□□□□□ -0.49
CASC19-222ENST00000641321 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
CASC19-222ENST00000641321 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms