RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	LAS1L	Q9Y4W2	734 aa	Known RBP	11.63	□□□□□ -0.55
CNTN2-231	ENST00000640352	TSPOAP1	O95153	1857 aa		11.63	□□□□□ -0.55
CNTN2-231	ENST00000640352	RAPGEF6	Q8TEU7	1601 aa		11.62	□□□□□ -0.55
CNTN2-231	ENST00000640352	UBE2Q2	Q8WVN8	375 aa		11.62	□□□□□ -0.55
CNTN2-231	ENST00000640352	RSPH4A	Q5TD94	716 aa		11.62	□□□□□ -0.55
CNTN2-231	ENST00000640352	RBM33	Q96EV2	1170 aa	Known RBP	11.62	□□□□□ -0.55
CNTN2-231	ENST00000640352	KANK1	Q14678	1352 aa		11.61	□□□□□ -0.55
CNTN2-231	ENST00000640352	AKNA	Q7Z591	1439 aa		11.61	□□□□□ -0.55
CNTN2-231	ENST00000640352	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.61	□□□□□ -0.55
CNTN2-231	ENST00000640352	TRAPPC8	Q9Y2L5	1435 aa		11.6	□□□□□ -0.55
CNTN2-231	ENST00000640352	PDE4C	Q08493	712 aa		11.6	□□□□□ -0.55
CNTN2-231	ENST00000640352	NEFM	P07197	916 aa		11.59	□□□□□ -0.55
CNTN2-231	ENST00000640352	FANCI	Q9NVI1	1328 aa		11.59	□□□□□ -0.55
CNTN2-231	ENST00000640352	NBPF8	Q3BBV2	869 aa		11.58	□□□□□ -0.56
CNTN2-231	ENST00000640352	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.57	□□□□□ -0.56
CNTN2-231	ENST00000640352	ERICH6B	Q5W0A0	696 aa		11.56	□□□□□ -0.56
CNTN2-231	ENST00000640352	LMOD2	Q6P5Q4	547 aa		11.56	□□□□□ -0.56
CNTN2-231	ENST00000640352	ARX	Q96QS3	562 aa		11.56	□□□□□ -0.56
CNTN2-231	ENST00000640352	C9orf84	Q5VXU9	1444 aa		11.56	□□□□□ -0.56
CNTN2-231	ENST00000640352	DENND4B	O75064	1496 aa	Predicted RBP	11.55	□□□□□ -0.56
CNTN2-231	ENST00000640352	ANKRD50	Q9ULJ7	1429 aa		11.55	□□□□□ -0.56
CNTN2-231	ENST00000640352	ZBTB7C	A1YPR0	619 aa		11.54	□□□□□ -0.56
CNTN2-231	ENST00000640352	SLC26A8	Q96RN1	970 aa		11.54	□□□□□ -0.56
CNTN2-231	ENST00000640352	SHROOM2	Q13796	1616 aa		11.54	□□□□□ -0.56
CNTN2-231	ENST00000640352	PLCH2	O75038	1416 aa		11.54	□□□□□ -0.56
CNTN2-231	ENST00000640352	NAIP	Q13075	1403 aa		11.54	□□□□□ -0.56
CNTN2-231	ENST00000640352	ADCY10	Q96PN6	1610 aa		11.53	□□□□□ -0.56
CNTN2-231	ENST00000640352	MAGI3	Q5TCQ9	1506 aa		11.53	□□□□□ -0.56
CNTN2-231	ENST00000640352	SAMD9	Q5K651	1589 aa		11.52	□□□□□ -0.57
CNTN2-231	ENST00000640352	EHBP1L1	Q8N3D4	1523 aa		11.52	□□□□□ -0.57
CNTN2-231	ENST00000640352	KDM5B	Q9UGL1	1544 aa		11.52	□□□□□ -0.57
CNTN2-231	ENST00000640352	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.51	□□□□□ -0.57
CNTN2-231	ENST00000640352	KIF7	Q2M1P5	1343 aa		11.51	□□□□□ -0.57
CNTN2-231	ENST00000640352	KIF14	Q15058	1648 aa		11.51	□□□□□ -0.57
CNTN2-231	ENST00000640352	CAMSAP2	Q08AD1	1489 aa		11.51	□□□□□ -0.57
CNTN2-231	ENST00000640352	PPM1G	O15355	546 aa	Predicted RBP	11.51	□□□□□ -0.57
CNTN2-231	ENST00000640352	SOX12	O15370	315 aa		11.51	□□□□□ -0.57
CNTN2-231	ENST00000640352	ABCA8	O94911	1581 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	TMEM132E	Q6IEE7	984 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	POGK	Q9P215	609 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	YEATS2	Q9ULM3	1422 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	CCDC7	Q96M83	1385 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	SKAP1	Q86WV1	359 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	HFM1	A2PYH4	1435 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	ABCC5	O15440	1437 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	UHRF1BP1L	A0JNW5	1464 aa		11.5	□□□□□ -0.57
CNTN2-231	ENST00000640352	ABCC10	Q5T3U5	1492 aa		11.49	□□□□□ -0.57
CNTN2-231	ENST00000640352	PLEKHH2	Q8IVE3	1493 aa		11.49	□□□□□ -0.57
CNTN2-231	ENST00000640352	SYCP2	Q9BX26	1530 aa		11.49	□□□□□ -0.57
CNTN2-231	ENST00000640352	DAPK1	P53355	1430 aa		11.49	□□□□□ -0.57
CNTN2-231	ENST00000640352	TRAK1	Q9UPV9	953 aa		11.49	□□□□□ -0.57
CNTN2-231	ENST00000640352	ZBED9	Q6R2W3	1325 aa		11.48	□□□□□ -0.57
CNTN2-231	ENST00000640352	CNTLN	Q9NXG0	1405 aa		11.48	□□□□□ -0.57
CNTN2-231	ENST00000640352	TXNDC2	Q86VQ3	553 aa		11.48	□□□□□ -0.57
CNTN2-231	ENST00000640352	EID1	Q9Y6B2	187 aa		11.48	□□□□□ -0.57
CNTN2-231	ENST00000640352	CARD11	Q9BXL7	1154 aa		11.48	□□□□□ -0.57
CNTN2-231	ENST00000640352	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.48	□□□□□ -0.57
CNTN2-231	ENST00000640352	CDK11B	P21127	795 aa	Known RBP	11.47	□□□□□ -0.57
CNTN2-231	ENST00000640352	IPO9	Q96P70	1041 aa	Known RBP	11.47	□□□□□ -0.57
CNTN2-231	ENST00000640352	MAP3K1	Q13233	1512 aa		11.47	□□□□□ -0.57
CNTN2-231	ENST00000640352	DDRGK1	Q96HY6	314 aa		11.46	□□□□□ -0.58
CNTN2-231	ENST00000640352	CANX	P27824	592 aa	Known RBP	11.45	□□□□□ -0.58
CNTN2-231	ENST00000640352	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.45	□□□□□ -0.58
CNTN2-231	ENST00000640352	PTPN23	Q9H3S7	1636 aa		11.45	□□□□□ -0.58
CNTN2-231	ENST00000640352	IDI1	Q13907	227 aa		11.45	□□□□□ -0.58
CNTN2-231	ENST00000640352	CCDC141	Q6ZP82	1450 aa		11.44	□□□□□ -0.58
CNTN2-231	ENST00000640352	TEX14	Q8IWB6	1497 aa		11.44	□□□□□ -0.58
CNTN2-231	ENST00000640352	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CNTN2-231	ENST00000640352	NUDC	Q9Y266	331 aa		11.44	□□□□□ -0.58
CNTN2-231	ENST00000640352	EXOC6	Q8TAG9	804 aa		11.44	□□□□□ -0.58
CNTN2-231	ENST00000640352	MIA2	Q96PC5	1412 aa		11.43	□□□□□ -0.58
CNTN2-231	ENST00000640352	PLIN1	O60240	522 aa		11.43	□□□□□ -0.58
CNTN2-231	ENST00000640352	IL27	Q8NEV9	243 aa		11.41	□□□□□ -0.58
CNTN2-231	ENST00000640352	NCOA1	Q15788	1441 aa		11.41	□□□□□ -0.58
CNTN2-231	ENST00000640352	TNNT2	P45379	298 aa	Predicted RBP	11.41	□□□□□ -0.58
CNTN2-231	ENST00000640352	PDIA4	P13667	645 aa	Known RBP	11.41	□□□□□ -0.58
CNTN2-231	ENST00000640352	WDR43	Q15061	677 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CNTN2-231	ENST00000640352	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.4	□□□□□ -0.58
CNTN2-231	ENST00000640352	TTC37	Q6PGP7	1564 aa		11.4	□□□□□ -0.58
CNTN2-231	ENST00000640352	CFAP70	Q5T0N1	1121 aa		11.4	□□□□□ -0.58
CNTN2-231	ENST00000640352	CFAP43	Q8NDM7	1665 aa		11.4	□□□□□ -0.58
CNTN2-231	ENST00000640352		A0A0G2JS52	829 aa		11.4	□□□□□ -0.58
CNTN2-231	ENST00000640352	SLC4A3	P48751	1232 aa		11.4	□□□□□ -0.58
CNTN2-231	ENST00000640352	CFAP65	Q6ZU64	1925 aa	Known RBP	11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	PIP4K2B	P78356	416 aa		11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	SRPK2	P78362	688 aa	Known RBP	11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	KDM6B	O15054	1643 aa		11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	CCDC144A	A2RUR9	1427 aa		11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
CNTN2-231	ENST00000640352	POGZ	Q7Z3K3	1410 aa		11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	DHX29	Q7Z478	1369 aa	Known RBP	11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	HDGF	P51858	240 aa	Known RBP	11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	HAP1	P54257	671 aa	Predicted RBP	11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	CDCA7L	Q96GN5	454 aa		11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	CC2D1B	Q5T0F9	858 aa	Known RBP	11.38	□□□□□ -0.59
CNTN2-231	ENST00000640352	ST20-MTHFS	A0A0A6YYL1	179 aa		11.37	□□□□□ -0.59
CNTN2-231	ENST00000640352	ZNF518A	Q6AHZ1	1483 aa		11.37	□□□□□ -0.59
CNTN2-231	ENST00000640352	UPF2	Q9HAU5	1272 aa	Known RBP	11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms