RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 PTPRGP23470 1445 aa24.11■■□□□ 1.45
CROCCP2-204ENST00000639456 MYBBP1AQ9BQG0 1328 aaKnown RBP24.08■■□□□ 1.44
CROCCP2-204ENST00000639456 ARHGEF12Q9NZN5 1544 aa24.07■■□□□ 1.44
CROCCP2-204ENST00000639456 FAM135AQ9P2D6 1515 aa24.06■■□□□ 1.44
CROCCP2-204ENST00000639456 SAMD9LQ8IVG5 1584 aa24.05■■□□□ 1.44
CROCCP2-204ENST00000639456 RNF123Q5XPI4 1314 aa24.05■■□□□ 1.44
CROCCP2-204ENST00000639456 CCDC144AA2RUR9 1427 aa24.04■■□□□ 1.44
CROCCP2-204ENST00000639456 CC2D1BQ5T0F9 858 aaKnown RBP24.04■■□□□ 1.44
CROCCP2-204ENST00000639456 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
CROCCP2-204ENST00000639456 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
CROCCP2-204ENST00000639456 CCDC141Q6ZP82 1450 aa24.03■■□□□ 1.44
CROCCP2-204ENST00000639456 RALBP1Q15311 655 aa24.01■■□□□ 1.43
CROCCP2-204ENST00000639456 LRPPRCP42704 1394 aaKnown RBP24.01■■□□□ 1.43
CROCCP2-204ENST00000639456 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
CROCCP2-204ENST00000639456 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
CROCCP2-204ENST00000639456 PRAG1Q86YV5 1406 aa23.99■■□□□ 1.43
CROCCP2-204ENST00000639456 ARHGEF5Q12774 1597 aa23.98■■□□□ 1.43
CROCCP2-204ENST00000639456 CDCA7LQ96GN5 454 aa23.97■■□□□ 1.43
CROCCP2-204ENST00000639456 PLA2R1Q13018 1463 aa23.97■■□□□ 1.43
CROCCP2-204ENST00000639456 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
CROCCP2-204ENST00000639456 EXOC6Q8TAG9 804 aa23.96■■□□□ 1.43
CROCCP2-204ENST00000639456 ARHGAP5Q13017 1502 aa23.96■■□□□ 1.43
CROCCP2-204ENST00000639456 BCL11AQ9H165 835 aa23.96■■□□□ 1.43
CROCCP2-204ENST00000639456 DISP3Q9P2K9 1392 aa23.95■■□□□ 1.43
CROCCP2-204ENST00000639456 PER1O15534 1290 aaPredicted RBP23.95■■□□□ 1.42
CROCCP2-204ENST00000639456 NLRP13Q86W25 1043 aa23.95■■□□□ 1.42
CROCCP2-204ENST00000639456 KTN1Q86UP2 1357 aaKnown RBP23.95■■□□□ 1.42
CROCCP2-204ENST00000639456 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
CROCCP2-204ENST00000639456 PREX2Q70Z35 1606 aa23.93■■□□□ 1.42
CROCCP2-204ENST00000639456 A2MP01023 1474 aa23.93■■□□□ 1.42
CROCCP2-204ENST00000639456 TTC37Q6PGP7 1564 aa23.93■■□□□ 1.42
CROCCP2-204ENST00000639456 TRPM1Q7Z4N2 1603 aa23.93■■□□□ 1.42
CROCCP2-204ENST00000639456 RRP1P56182 461 aaKnown RBP23.93■■□□□ 1.42
CROCCP2-204ENST00000639456 PANK3Q9H999 370 aa23.93■■□□□ 1.42
CROCCP2-204ENST00000639456 RCAN3Q9UKA8 241 aa23.92■■□□□ 1.42
CROCCP2-204ENST00000639456 E9PCH4 1651 aa23.92■■□□□ 1.42
CROCCP2-204ENST00000639456 TESK2Q96S53 571 aa23.91■■□□□ 1.42
CROCCP2-204ENST00000639456 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
CROCCP2-204ENST00000639456 NBR1Q14596 966 aa23.9■■□□□ 1.42
CROCCP2-204ENST00000639456 RSPH4AQ5TD94 716 aa23.9■■□□□ 1.42
CROCCP2-204ENST00000639456 PLIN1O60240 522 aa23.89■■□□□ 1.42
CROCCP2-204ENST00000639456 NOP58Q9Y2X3 529 aaKnown RBP23.88■■□□□ 1.41
CROCCP2-204ENST00000639456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.87■■□□□ 1.411e-9■■□□□ 11.8
CROCCP2-204ENST00000639456 CHD1O14646 1710 aa23.86■■□□□ 1.41
CROCCP2-204ENST00000639456 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
CROCCP2-204ENST00000639456 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
CROCCP2-204ENST00000639456 SKAP1Q86WV1 359 aa23.82■■□□□ 1.4
CROCCP2-204ENST00000639456 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
CROCCP2-204ENST00000639456 ERBINQ96RT1 1412 aa23.8■■□□□ 1.4
CROCCP2-204ENST00000639456 TMF1P82094 1093 aa23.8■■□□□ 1.4
CROCCP2-204ENST00000639456 GPRASP1Q5JY77 1395 aa23.8■■□□□ 1.4
CROCCP2-204ENST00000639456 ANP32AP39687 249 aaKnown RBP23.8■■□□□ 1.4
CROCCP2-204ENST00000639456 MYO5CQ9NQX4 1742 aa23.8■■□□□ 1.4
CROCCP2-204ENST00000639456 UNC13BO14795 1591 aa23.78■■□□□ 1.4
CROCCP2-204ENST00000639456 PRDM15P57071 1507 aaPredicted RBP23.76■■□□□ 1.39
CROCCP2-204ENST00000639456 ADAMTS8Q9UP79 889 aa23.75■■□□□ 1.39
CROCCP2-204ENST00000639456 IPO9Q96P70 1041 aaKnown RBP23.75■■□□□ 1.39
CROCCP2-204ENST00000639456 AFAP1Q8N556 730 aa23.74■■□□□ 1.39
CROCCP2-204ENST00000639456 IQGAP3Q86VI3 1631 aa23.73■■□□□ 1.39
CROCCP2-204ENST00000639456 PDE3BQ13370 1112 aa23.72■■□□□ 1.39
CROCCP2-204ENST00000639456 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
CROCCP2-204ENST00000639456 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
CROCCP2-204ENST00000639456 C20orf194Q5TEA3 1177 aa23.7■■□□□ 1.38
CROCCP2-204ENST00000639456 EFCAB2Q5VUJ9 269 aa23.7■■□□□ 1.38
CROCCP2-204ENST00000639456 CRBNQ96SW2 442 aa23.7■■□□□ 1.38
CROCCP2-204ENST00000639456 ZBTB47Q9UFB7 747 aaPredicted RBP23.7■■□□□ 1.38
CROCCP2-204ENST00000639456 DEKP35659 375 aaKnown RBP23.69■■□□□ 1.38
CROCCP2-204ENST00000639456 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
CROCCP2-204ENST00000639456 KNSTRNQ9Y448 316 aa23.68■■□□□ 1.38
CROCCP2-204ENST00000639456 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
CROCCP2-204ENST00000639456 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
CROCCP2-204ENST00000639456 MAGI2Q86UL8 1455 aa23.67■■□□□ 1.38
CROCCP2-204ENST00000639456 WASHC2CQ9Y4E1 1318 aa23.67■■□□□ 1.38
CROCCP2-204ENST00000639456 MYT1LQ9UL68 1186 aa23.66■■□□□ 1.38
CROCCP2-204ENST00000639456 PDE4AP27815 886 aa23.65■■□□□ 1.38
CROCCP2-204ENST00000639456 BLMP54132 1417 aaPredicted RBP23.64■■□□□ 1.38
CROCCP2-204ENST00000639456 PLCH2O75038 1416 aa23.64■■□□□ 1.37
CROCCP2-204ENST00000639456 PPP2R1AP30153 589 aa23.64■■□□□ 1.37
CROCCP2-204ENST00000639456 SPAG9O60271 1321 aaKnown RBP23.64■■□□□ 1.37
CROCCP2-204ENST00000639456 EIF2AK4Q9P2K8 1649 aaKnown RBP23.63■■□□□ 1.37
CROCCP2-204ENST00000639456 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
CROCCP2-204ENST00000639456 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
CROCCP2-204ENST00000639456 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.374e-8■■■■□ 21.4
CROCCP2-204ENST00000639456 LAMC1P11047 1609 aa23.61■■□□□ 1.37
CROCCP2-204ENST00000639456 CCDC146Q8IYE0 955 aa23.61■■□□□ 1.37
CROCCP2-204ENST00000639456 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
CROCCP2-204ENST00000639456 ATP10AO60312 1499 aa23.6■■□□□ 1.37
CROCCP2-204ENST00000639456 PLEKHH1Q9ULM0 1364 aa23.6■■□□□ 1.37
CROCCP2-204ENST00000639456 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
CROCCP2-204ENST00000639456 BACH2Q9BYV9 841 aa23.58■■□□□ 1.37
CROCCP2-204ENST00000639456 ZCCHC11Q5TAX3 1644 aaKnown RBP23.57■■□□□ 1.36
CROCCP2-204ENST00000639456 KIF3BO15066 747 aa23.55■■□□□ 1.36
CROCCP2-204ENST00000639456 LAS1LQ9Y4W2 734 aaKnown RBP23.55■■□□□ 1.36
CROCCP2-204ENST00000639456 RNF17Q9BXT8 1623 aaKnown RBP23.55■■□□□ 1.36
CROCCP2-204ENST00000639456 ABCC1P33527 1531 aa23.55■■□□□ 1.36
CROCCP2-204ENST00000639456 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
CROCCP2-204ENST00000639456 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
CROCCP2-204ENST00000639456 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
CROCCP2-204ENST00000639456 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
CROCCP2-204ENST00000639456 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms