RNA–Protein interactions for RNA: ENST00000638921.1

GFAP-230, Transcript of glial fibrillary acidic protein, humanhuman

Gene GFAP, Length 2,617 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-230ENST00000638921 DCAF11Q8TEB1 546 aa19.46■□□□□ 0.71
GFAP-230ENST00000638921 ST20-MTHFSA0A0A6YYL1 179 aa19.46■□□□□ 0.71
GFAP-230ENST00000638921 RSPH4AQ5TD94 716 aa19.45■□□□□ 0.7
GFAP-230ENST00000638921 TMC1Q8TDI8 760 aa19.45■□□□□ 0.7
GFAP-230ENST00000638921 CCDC141Q6ZP82 1450 aa19.44■□□□□ 0.7
GFAP-230ENST00000638921 RNF123Q5XPI4 1314 aa19.44■□□□□ 0.7
GFAP-230ENST00000638921 KTN1Q86UP2 1357 aaKnown RBP19.43■□□□□ 0.7
GFAP-230ENST00000638921 FAM135AQ9P2D6 1515 aa19.41■□□□□ 0.7
GFAP-230ENST00000638921 RALBP1Q15311 655 aa19.4■□□□□ 0.7
GFAP-230ENST00000638921 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
GFAP-230ENST00000638921 BRD4O60885 1362 aaPredicted RBP19.39■□□□□ 0.7
GFAP-230ENST00000638921 MYBBP1AQ9BQG0 1328 aaKnown RBP19.39■□□□□ 0.69
GFAP-230ENST00000638921 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
GFAP-230ENST00000638921 PREX2Q70Z35 1606 aa19.38■□□□□ 0.69
GFAP-230ENST00000638921 CDC42BPBQ9Y5S2 1711 aa19.37■□□□□ 0.69
GFAP-230ENST00000638921 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
GFAP-230ENST00000638921 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
GFAP-230ENST00000638921 PRAG1Q86YV5 1406 aa19.36■□□□□ 0.69
GFAP-230ENST00000638921 E9PCH4 1651 aa19.34■□□□□ 0.69
GFAP-230ENST00000638921 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
GFAP-230ENST00000638921 TRPM1Q7Z4N2 1603 aa19.31■□□□□ 0.68
GFAP-230ENST00000638921 SYCP2Q9BX26 1530 aa19.31■□□□□ 0.68
GFAP-230ENST00000638921 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
GFAP-230ENST00000638921 PLA2R1Q13018 1463 aa19.3■□□□□ 0.68
GFAP-230ENST00000638921 GPRASP1Q5JY77 1395 aa19.3■□□□□ 0.68
GFAP-230ENST00000638921 UNC13BO14795 1591 aa19.3■□□□□ 0.68
GFAP-230ENST00000638921 NOP58Q9Y2X3 529 aaKnown RBP19.3■□□□□ 0.68
GFAP-230ENST00000638921 SENP3-EIF4A1A0A087X0R7 540 aa19.29■□□□□ 0.68
GFAP-230ENST00000638921 ARHGAP5Q13017 1502 aa19.29■□□□□ 0.68
GFAP-230ENST00000638921 RGL3Q3MIN7 710 aa19.29■□□□□ 0.68
GFAP-230ENST00000638921 NLRP13Q86W25 1043 aa19.29■□□□□ 0.68
GFAP-230ENST00000638921 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
GFAP-230ENST00000638921 NBPF1Q3BBV0 1214 aa19.28■□□□□ 0.68
GFAP-230ENST00000638921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.68
GFAP-230ENST00000638921 A2MP01023 1474 aa19.27■□□□□ 0.67
GFAP-230ENST00000638921 TTC37Q6PGP7 1564 aa19.27■□□□□ 0.67
GFAP-230ENST00000638921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.26■□□□□ 0.67
GFAP-230ENST00000638921 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
GFAP-230ENST00000638921 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
GFAP-230ENST00000638921 UBE2Q2Q8WVN8 375 aa19.24■□□□□ 0.67
GFAP-230ENST00000638921 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
GFAP-230ENST00000638921 WASHC2CQ9Y4E1 1318 aa19.24■□□□□ 0.67
GFAP-230ENST00000638921 NBR1Q14596 966 aa19.24■□□□□ 0.67
GFAP-230ENST00000638921 LAMC1P11047 1609 aa19.23■□□□□ 0.67
GFAP-230ENST00000638921 IQGAP3Q86VI3 1631 aa19.23■□□□□ 0.67
GFAP-230ENST00000638921 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
GFAP-230ENST00000638921 TESK2Q96S53 571 aa19.22■□□□□ 0.67
GFAP-230ENST00000638921 PRDM15P57071 1507 aaPredicted RBP19.22■□□□□ 0.67
GFAP-230ENST00000638921 ATP10AO60312 1499 aa19.22■□□□□ 0.67
GFAP-230ENST00000638921 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
GFAP-230ENST00000638921 DUOX2Q9NRD8 1548 aa19.21■□□□□ 0.67
GFAP-230ENST00000638921 RRP1P56182 461 aaKnown RBP19.2■□□□□ 0.66
GFAP-230ENST00000638921 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
GFAP-230ENST00000638921 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
GFAP-230ENST00000638921 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
GFAP-230ENST00000638921 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
GFAP-230ENST00000638921 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
GFAP-230ENST00000638921 ERBINQ96RT1 1412 aa19.18■□□□□ 0.66
GFAP-230ENST00000638921 MYO5CQ9NQX4 1742 aa19.18■□□□□ 0.66
GFAP-230ENST00000638921 PAK3O75914 559 aaPredicted RBP19.18■□□□□ 0.66
GFAP-230ENST00000638921 RCAN3Q9UKA8 241 aa19.18■□□□□ 0.66
GFAP-230ENST00000638921 CHD1O14646 1710 aa19.17■□□□□ 0.66
GFAP-230ENST00000638921 INSRP06213 1382 aa19.17■□□□□ 0.66
GFAP-230ENST00000638921 TMF1P82094 1093 aa19.17■□□□□ 0.66
GFAP-230ENST00000638921 PANK3Q9H999 370 aa19.15■□□□□ 0.66
GFAP-230ENST00000638921 PLCH2O75038 1416 aa19.14■□□□□ 0.66
GFAP-230ENST00000638921 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
GFAP-230ENST00000638921 ZMYM4Q5VZL5 1548 aa19.14■□□□□ 0.65
GFAP-230ENST00000638921 IL27Q8NEV9 243 aa19.14■□□□□ 0.65
GFAP-230ENST00000638921 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
GFAP-230ENST00000638921 EFCAB2Q5VUJ9 269 aa19.13■□□□□ 0.65
GFAP-230ENST00000638921 EXOC6Q8TAG9 804 aa19.12■□□□□ 0.65
GFAP-230ENST00000638921 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
GFAP-230ENST00000638921 BLMP54132 1417 aaPredicted RBP19.11■□□□□ 0.65
GFAP-230ENST00000638921 ANP32AP39687 249 aaKnown RBP19.09■□□□□ 0.65
GFAP-230ENST00000638921 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.65
GFAP-230ENST00000638921 RNF17Q9BXT8 1623 aaKnown RBP19.08■□□□□ 0.65
GFAP-230ENST00000638921 ABCC1P33527 1531 aa19.07■□□□□ 0.64
GFAP-230ENST00000638921 IPO9Q96P70 1041 aaKnown RBP19.06■□□□□ 0.64
GFAP-230ENST00000638921 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
GFAP-230ENST00000638921 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
GFAP-230ENST00000638921 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
GFAP-230ENST00000638921 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
GFAP-230ENST00000638921 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
GFAP-230ENST00000638921 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
GFAP-230ENST00000638921 SPAG9O60271 1321 aaKnown RBP19.02■□□□□ 0.64
GFAP-230ENST00000638921 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
GFAP-230ENST00000638921 MADDQ8WXG6 1647 aa19.02■□□□□ 0.63
GFAP-230ENST00000638921 KNSTRNQ9Y448 316 aa19.02■□□□□ 0.63
GFAP-230ENST00000638921 RTN4Q9NQC3 1192 aaKnown RBP19.01■□□□□ 0.63
GFAP-230ENST00000638921 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.01■□□□□ 0.63
GFAP-230ENST00000638921 CDCA8Q53HL2 280 aa19.01■□□□□ 0.63
GFAP-230ENST00000638921 TRPM2O94759 1503 aa19.01■□□□□ 0.63
GFAP-230ENST00000638921 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
GFAP-230ENST00000638921 PTPRTO14522 1441 aa19■□□□□ 0.63
GFAP-230ENST00000638921 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
GFAP-230ENST00000638921 IQGAP1P46940 1657 aa18.99■□□□□ 0.63
GFAP-230ENST00000638921 ZBTB47Q9UFB7 747 aaPredicted RBP18.98■□□□□ 0.63
GFAP-230ENST00000638921 SCAF11Q99590 1463 aaKnown RBP18.98■□□□□ 0.63
GFAP-230ENST00000638921 MS4A1P11836 297 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms