RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
SCARB2-210ENST00000638567 USP35Q9P2H5 1018 aa21.11■□□□□ 0.97
SCARB2-210ENST00000638567 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
SCARB2-210ENST00000638567 APBB1O00213 710 aa21.1■□□□□ 0.97
SCARB2-210ENST00000638567 HDGFL2Q7Z4V5 671 aaPredicted RBP21.1■□□□□ 0.97
SCARB2-210ENST00000638567 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
SCARB2-210ENST00000638567 ANKRD50Q9ULJ7 1429 aa21.08■□□□□ 0.96
SCARB2-210ENST00000638567 DNTTIP2Q5QJE6 756 aaKnown RBP21.08■□□□□ 0.96
SCARB2-210ENST00000638567 MLECQ14165 292 aa21.07■□□□□ 0.96
SCARB2-210ENST00000638567 COG6Q9Y2V7 657 aa21.07■□□□□ 0.96
SCARB2-210ENST00000638567 AQRO60306 1485 aaKnown RBP eCLIP21.06■□□□□ 0.96
SCARB2-210ENST00000638567 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
SCARB2-210ENST00000638567 PTPRGP23470 1445 aa21.06■□□□□ 0.96
SCARB2-210ENST00000638567 E9PSI1 815 aa21.05■□□□□ 0.96
SCARB2-210ENST00000638567 CDCA7LQ96GN5 454 aa21.05■□□□□ 0.96
SCARB2-210ENST00000638567 PLCB2Q00722 1185 aa21.04■□□□□ 0.96
SCARB2-210ENST00000638567 AKNAQ7Z591 1439 aa21.02■□□□□ 0.96
SCARB2-210ENST00000638567 BRD4O60885 1362 aaPredicted RBP21.01■□□□□ 0.95
SCARB2-210ENST00000638567 CGNL1Q0VF96 1302 aa21.01■□□□□ 0.95
SCARB2-210ENST00000638567 GBP4Q96PP9 640 aa21.01■□□□□ 0.95
SCARB2-210ENST00000638567 GSE1Q14687 1217 aa21■□□□□ 0.95
SCARB2-210ENST00000638567 HAP1P54257 671 aaPredicted RBP20.99■□□□□ 0.95
SCARB2-210ENST00000638567 NESP48681 1621 aa20.99■□□□□ 0.95
SCARB2-210ENST00000638567 NAIPQ13075 1403 aa20.99■□□□□ 0.95
SCARB2-210ENST00000638567 OS9Q13438 667 aaPredicted RBP20.99■□□□□ 0.95
SCARB2-210ENST00000638567 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
SCARB2-210ENST00000638567 TERF2IPQ9NYB0 399 aa20.99■□□□□ 0.95
SCARB2-210ENST00000638567 PNISRQ8TF01 805 aaKnown RBP20.98■□□□□ 0.95
SCARB2-210ENST00000638567 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
SCARB2-210ENST00000638567 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
SCARB2-210ENST00000638567 ADAMTS8Q9UP79 889 aa20.97■□□□□ 0.95
SCARB2-210ENST00000638567 MIA2Q96PC5 1412 aa20.97■□□□□ 0.95
SCARB2-210ENST00000638567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
SCARB2-210ENST00000638567 GOLGA6L3A6NEY3 463 aa20.96■□□□□ 0.95
SCARB2-210ENST00000638567 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
SCARB2-210ENST00000638567 PAK3O75914 559 aaPredicted RBP20.96■□□□□ 0.95
SCARB2-210ENST00000638567 NBPF1Q3BBV0 1214 aa20.95■□□□□ 0.94
SCARB2-210ENST00000638567 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
SCARB2-210ENST00000638567 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-210ENST00000638567 KCNJ4P48050 445 aa20.94■□□□□ 0.94
SCARB2-210ENST00000638567 RTF1Q92541 710 aaKnown RBP20.94■□□□□ 0.94
SCARB2-210ENST00000638567 FOXD4L1Q9NU39 408 aa20.94■□□□□ 0.94
SCARB2-210ENST00000638567 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
SCARB2-210ENST00000638567 CFAP44Q96MT7 982 aa20.93■□□□□ 0.94
SCARB2-210ENST00000638567 MSNP26038 577 aaKnown RBP20.93■□□□□ 0.94
SCARB2-210ENST00000638567 ZKSCAN2Q63HK3 967 aa20.92■□□□□ 0.94
SCARB2-210ENST00000638567 MCCP23508 829 aa20.92■□□□□ 0.94
SCARB2-210ENST00000638567 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
SCARB2-210ENST00000638567 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
SCARB2-210ENST00000638567 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
SCARB2-210ENST00000638567 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
SCARB2-210ENST00000638567 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
SCARB2-210ENST00000638567 PRDM2Q13029 1718 aa20.89■□□□□ 0.94
SCARB2-210ENST00000638567 KIAA1107Q9UPP5 1409 aa20.88■□□□□ 0.93
SCARB2-210ENST00000638567 HDGFP51858 240 aaKnown RBP20.88■□□□□ 0.93
SCARB2-210ENST00000638567 A0A0G2JS52 829 aa20.88■□□□□ 0.93
SCARB2-210ENST00000638567 ZRSR1Q15695 479 aaKnown RBP20.87■□□□□ 0.93
SCARB2-210ENST00000638567 NGEFQ8N5V2 710 aa20.86■□□□□ 0.93
SCARB2-210ENST00000638567 FGD1P98174 961 aa20.86■□□□□ 0.93
SCARB2-210ENST00000638567 PANK1Q8TE04 598 aa20.85■□□□□ 0.93
SCARB2-210ENST00000638567 SMG6Q86US8 1419 aaKnown RBP20.85■□□□□ 0.93
SCARB2-210ENST00000638567 PCF11O94913 1555 aaKnown RBP20.85■□□□□ 0.93
SCARB2-210ENST00000638567 NFKBIBQ15653 356 aa20.84■□□□□ 0.93
SCARB2-210ENST00000638567 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
SCARB2-210ENST00000638567 MSH5O43196 834 aa20.84■□□□□ 0.93
SCARB2-210ENST00000638567 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
SCARB2-210ENST00000638567 PTMSP20962 102 aa20.83■□□□□ 0.92
SCARB2-210ENST00000638567 EVC2Q86UK5 1308 aa20.83■□□□□ 0.92
SCARB2-210ENST00000638567 PPP2R1AP30153 589 aa20.83■□□□□ 0.92
SCARB2-210ENST00000638567 ANKRD45Q5TZF3 282 aa20.83■□□□□ 0.92
SCARB2-210ENST00000638567 SLC4A10Q6U841 1118 aa20.82■□□□□ 0.92
SCARB2-210ENST00000638567 GOLGA6L4A6NEF3 574 aa20.81■□□□□ 0.92
SCARB2-210ENST00000638567 DAPK1P53355 1430 aa20.81■□□□□ 0.92
SCARB2-210ENST00000638567 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
SCARB2-210ENST00000638567 VGFO15240 615 aaPredicted RBP20.81■□□□□ 0.92
SCARB2-210ENST00000638567 RUNDC1Q96C34 613 aa20.81■□□□□ 0.92
SCARB2-210ENST00000638567 TAOK2Q9UL54 1235 aa20.8■□□□□ 0.92
SCARB2-210ENST00000638567 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
SCARB2-210ENST00000638567 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
SCARB2-210ENST00000638567 BACH2Q9BYV9 841 aa20.79■□□□□ 0.92
SCARB2-210ENST00000638567 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
SCARB2-210ENST00000638567 STK31Q9BXU1 1019 aa20.79■□□□□ 0.92
SCARB2-210ENST00000638567 KIAA1211Q6ZU35 1233 aa20.78■□□□□ 0.92
SCARB2-210ENST00000638567 NAP1L2Q9ULW6 460 aaPredicted RBP20.78■□□□□ 0.92
SCARB2-210ENST00000638567 LMOD3Q0VAK6 560 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 DDX19BQ9UMR2 479 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 HMMRO75330 724 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 CC2D2AQ9P2K1 1620 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 TROQ12816 1431 aaPredicted RBP20.77■□□□□ 0.92
SCARB2-210ENST00000638567 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.92
SCARB2-210ENST00000638567 STAC3Q96MF2 364 aa20.77■□□□□ 0.91
SCARB2-210ENST00000638567 ANKRD30BQ9BXX2 1392 aa20.77■□□□□ 0.91
SCARB2-210ENST00000638567 DDX11L8A8MPP1 907 aa20.76■□□□□ 0.91
SCARB2-210ENST00000638567 AFAP1Q8N556 730 aa20.76■□□□□ 0.91
SCARB2-210ENST00000638567 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
SCARB2-210ENST00000638567 CDK13Q14004 1512 aaKnown RBP20.76■□□□□ 0.91
SCARB2-210ENST00000638567 NOL8Q76FK4 1167 aaKnown RBP20.75■□□□□ 0.91
SCARB2-210ENST00000638567 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms