RNA–Protein interactions for RNA: ENST00000638298.1

RTTN-212, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-212ENST00000638298 STAC3Q96MF2 364 aa14.25□□□□□ -0.13
RTTN-212ENST00000638298 MFSD10Q14728 455 aa14.24□□□□□ -0.13
RTTN-212ENST00000638298 DDX27Q96GQ7 796 aaKnown RBP14.24□□□□□ -0.13
RTTN-212ENST00000638298 JPH4Q96JJ6 628 aa14.24□□□□□ -0.13
RTTN-212ENST00000638298 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
RTTN-212ENST00000638298 LARP6Q9BRS8 491 aaKnown RBP14.22□□□□□ -0.13
RTTN-212ENST00000638298 EVI5O60447 810 aa14.21□□□□□ -0.13
RTTN-212ENST00000638298 KCTD12Q96CX2 325 aaKnown RBP14.21□□□□□ -0.13
RTTN-212ENST00000638298 WDR62O43379 1518 aa14.2□□□□□ -0.14
RTTN-212ENST00000638298 PTPREP23469 700 aa14.2□□□□□ -0.14
RTTN-212ENST00000638298 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
RTTN-212ENST00000638298 PEG3Q9GZU2 1588 aa14.2□□□□□ -0.14
RTTN-212ENST00000638298 ZDHHC16Q969W1 377 aa14.17□□□□□ -0.14
RTTN-212ENST00000638298 BHMG1C9JSJ3 638 aaPredicted RBP14.16□□□□□ -0.14
RTTN-212ENST00000638298 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
RTTN-212ENST00000638298 ZBED2Q9BTP6 218 aa14.15□□□□□ -0.14
RTTN-212ENST00000638298 MAP3K9P80192 1104 aa14.14□□□□□ -0.15
RTTN-212ENST00000638298 ADAM33Q9BZ11 813 aa14.12□□□□□ -0.15
RTTN-212ENST00000638298 EMILIN3Q9NT22 766 aa14.12□□□□□ -0.15
RTTN-212ENST00000638298 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
RTTN-212ENST00000638298 RIMBP3CA6NJZ7 1639 aa14.09□□□□□ -0.15
RTTN-212ENST00000638298 RIMBP3BA6NNM3 1639 aa14.09□□□□□ -0.15
RTTN-212ENST00000638298 RIMBP3Q9UFD9 1639 aa14.09□□□□□ -0.15
RTTN-212ENST00000638298 CYB5RLQ6IPT4 315 aa14.06□□□□□ -0.16
RTTN-212ENST00000638298 THSD4Q6ZMP0 1018 aa14.06□□□□□ -0.16
RTTN-212ENST00000638298 CADPS2Q86UW7 1296 aa14.06□□□□□ -0.16
RTTN-212ENST00000638298 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
RTTN-212ENST00000638298 NBPF3Q9H094 633 aa14.05□□□□□ -0.16
RTTN-212ENST00000638298 PCDHGA10Q9Y5H3 936 aa14.05□□□□□ -0.16
RTTN-212ENST00000638298 PPP1R3GB7ZBB8 358 aa14.04□□□□□ -0.16
RTTN-212ENST00000638298 PTPN5P54829 565 aa14.04□□□□□ -0.16
RTTN-212ENST00000638298 IFFO2Q5TF58 517 aa14.03□□□□□ -0.16
RTTN-212ENST00000638298 FBXW7Q969H0 707 aa14.03□□□□□ -0.16
RTTN-212ENST00000638298 GOLGA8CPA6NN73 597 aa14.02□□□□□ -0.17
RTTN-212ENST00000638298 WIZO95785 1651 aa14.01□□□□□ -0.17
RTTN-212ENST00000638298 PHF14O94880 888 aa14.01□□□□□ -0.17
RTTN-212ENST00000638298 CAMK2BQ13554 666 aa14.01□□□□□ -0.17
RTTN-212ENST00000638298 WNT2BQ93097 391 aa14.01□□□□□ -0.17
RTTN-212ENST00000638298 ARHGEF11O15085 1522 aa14□□□□□ -0.17
RTTN-212ENST00000638298 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
RTTN-212ENST00000638298 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
RTTN-212ENST00000638298 RABGEF1Q9UJ41 708 aa13.98□□□□□ -0.17
RTTN-212ENST00000638298 COL9A1P20849 921 aa13.94□□□□□ -0.18
RTTN-212ENST00000638298 EPAS1Q99814 870 aa13.94□□□□□ -0.18
RTTN-212ENST00000638298 CFTRP13569 1480 aa13.93□□□□□ -0.18
RTTN-212ENST00000638298 ZNF608Q9ULD9 1512 aaPredicted RBP13.93□□□□□ -0.18
RTTN-212ENST00000638298 RGS20O76081 388 aa13.92□□□□□ -0.18
RTTN-212ENST00000638298 PROX2Q3B8N5 592 aa13.91□□□□□ -0.18
RTTN-212ENST00000638298 LAPTM4BQ86VI4 370 aa13.91□□□□□ -0.18
RTTN-212ENST00000638298 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
RTTN-212ENST00000638298 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
RTTN-212ENST00000638298 DPYSL4O14531 572 aa13.88□□□□□ -0.19
RTTN-212ENST00000638298 ANKK1Q8NFD2 765 aa13.88□□□□□ -0.19
RTTN-212ENST00000638298 C6orf132Q5T0Z8 1188 aa13.86□□□□□ -0.19
RTTN-212ENST00000638298 IFT140Q96RY7 1462 aa13.85□□□□□ -0.19
RTTN-212ENST00000638298 A0A0G2JS52 829 aa13.84□□□□□ -0.19
RTTN-212ENST00000638298 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
RTTN-212ENST00000638298 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
RTTN-212ENST00000638298 SOWAHBA6NEL2 793 aa13.81□□□□□ -0.2
RTTN-212ENST00000638298 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
RTTN-212ENST00000638298 ITGBL1O95965 494 aaPredicted RBP13.8□□□□□ -0.2
RTTN-212ENST00000638298 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
RTTN-212ENST00000638298 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
RTTN-212ENST00000638298 PDIA6Q15084 440 aa13.78□□□□□ -0.2
RTTN-212ENST00000638298 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.2
RTTN-212ENST00000638298 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
RTTN-212ENST00000638298 BCAMP50895 628 aa13.77□□□□□ -0.21
RTTN-212ENST00000638298 CHD1O14646 1710 aa13.76□□□□□ -0.21
RTTN-212ENST00000638298 DDX12PQ92771 950 aa13.76□□□□□ -0.21
RTTN-212ENST00000638298 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
RTTN-212ENST00000638298 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
RTTN-212ENST00000638298 EN1Q05925 392 aaPredicted RBP13.75□□□□□ -0.21
RTTN-212ENST00000638298 FAM98CQ17RN3 349 aaKnown RBP13.75□□□□□ -0.21
RTTN-212ENST00000638298 SPDYE16A6NNV3 312 aaPredicted RBP13.74□□□□□ -0.21
RTTN-212ENST00000638298 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
RTTN-212ENST00000638298 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
RTTN-212ENST00000638298 SPRYD3Q8NCJ5 442 aa13.73□□□□□ -0.21
RTTN-212ENST00000638298 SEPT9Q9UHD8 586 aaPredicted RBP13.72□□□□□ -0.21
RTTN-212ENST00000638298 NBR1Q14596 966 aa13.7□□□□□ -0.22
RTTN-212ENST00000638298 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
RTTN-212ENST00000638298 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
RTTN-212ENST00000638298 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
RTTN-212ENST00000638298 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
RTTN-212ENST00000638298 MAP3K7O43318 606 aa13.67□□□□□ -0.22
RTTN-212ENST00000638298 PACS2Q86VP3 889 aa13.67□□□□□ -0.22
RTTN-212ENST00000638298 TSR1Q2NL82 804 aaKnown RBP13.66□□□□□ -0.22
RTTN-212ENST00000638298 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
RTTN-212ENST00000638298 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
RTTN-212ENST00000638298 TSR3Q9UJK0 312 aaKnown RBP13.66□□□□□ -0.22
RTTN-212ENST00000638298 TSKSQ9UJT2 592 aa13.66□□□□□ -0.22
RTTN-212ENST00000638298 CCDC88BA6NC98 1476 aa13.66□□□□□ -0.22
RTTN-212ENST00000638298 E2F4Q16254 413 aa13.65□□□□□ -0.22
RTTN-212ENST00000638298 CHMP7Q8WUX9 453 aaPredicted RBP13.65□□□□□ -0.22
RTTN-212ENST00000638298 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
RTTN-212ENST00000638298 ABCC8Q09428 1581 aa13.65□□□□□ -0.22
RTTN-212ENST00000638298 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
RTTN-212ENST00000638298 TDRD9Q8NDG6 1382 aaKnown RBP13.64□□□□□ -0.23
RTTN-212ENST00000638298 CERKQ8TCT0 537 aa13.63□□□□□ -0.23
RTTN-212ENST00000638298 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
RTTN-212ENST00000638298 KCNC4Q03721 635 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms