RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 AKAP17AQ02040 695 aaKnown RBP23.56■■□□□ 1.36
CACNA1A-246ENST00000637736 TIMELESSQ9UNS1 1208 aa23.56■■□□□ 1.36
CACNA1A-246ENST00000637736 RALBP1Q15311 655 aa23.55■■□□□ 1.36
CACNA1A-246ENST00000637736 FOXD4L1Q9NU39 408 aa23.55■■□□□ 1.36
CACNA1A-246ENST00000637736 SLC4A10Q6U841 1118 aa23.55■■□□□ 1.36
CACNA1A-246ENST00000637736 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
CACNA1A-246ENST00000637736 SIN3AQ96ST3 1273 aa23.54■■□□□ 1.36
CACNA1A-246ENST00000637736 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
CACNA1A-246ENST00000637736 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.54■■□□□ 1.367e-11■■■■■ 260.8
CACNA1A-246ENST00000637736 PCMTD1Q96MG8 357 aaPredicted RBP23.54■■□□□ 1.36
CACNA1A-246ENST00000637736 GPS2Q13227 327 aa23.54■■□□□ 1.36
CACNA1A-246ENST00000637736 RCAN3Q9UKA8 241 aa23.53■■□□□ 1.36
CACNA1A-246ENST00000637736 ST18O60284 1047 aa23.53■■□□□ 1.36
CACNA1A-246ENST00000637736 GOLGA6L19H0YKK7 550 aa23.53■■□□□ 1.36
CACNA1A-246ENST00000637736 FOXD4L5Q5VV16 416 aaPredicted RBP23.53■■□□□ 1.36
CACNA1A-246ENST00000637736 FOXD4L4Q8WXT5 416 aaPredicted RBP23.53■■□□□ 1.36
CACNA1A-246ENST00000637736 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
CACNA1A-246ENST00000637736 CARMIL2Q6F5E8 1435 aa23.52■■□□□ 1.36
CACNA1A-246ENST00000637736 TERF2IPQ9NYB0 399 aa23.51■■□□□ 1.35
CACNA1A-246ENST00000637736 CWC22Q9HCG8 908 aaKnown RBP23.5■■□□□ 1.35
CACNA1A-246ENST00000637736 SMC4Q9NTJ3 1288 aa23.5■■□□□ 1.35
CACNA1A-246ENST00000637736 SETD5Q9C0A6 1442 aa23.5■■□□□ 1.35
CACNA1A-246ENST00000637736 KAT6BQ8WYB5 2073 aa23.49■■□□□ 1.35
CACNA1A-246ENST00000637736 GGT6Q6P531 493 aa23.49■■□□□ 1.35
CACNA1A-246ENST00000637736 EID1Q9Y6B2 187 aa23.48■■□□□ 1.35
CACNA1A-246ENST00000637736 FAM184AQ8NB25 1140 aa23.48■■□□□ 1.35
CACNA1A-246ENST00000637736 MSH5O43196 834 aa23.48■■□□□ 1.35
CACNA1A-246ENST00000637736 LRRFIP1Q32MZ4 808 aaKnown RBP23.46■■□□□ 1.35
CACNA1A-246ENST00000637736 AMOTL1Q8IY63 956 aa23.45■■□□□ 1.34
CACNA1A-246ENST00000637736 NOL10Q9BSC4 688 aaKnown RBP23.44■■□□□ 1.34
CACNA1A-246ENST00000637736 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
CACNA1A-246ENST00000637736 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
CACNA1A-246ENST00000637736 ODF2Q5BJF6 829 aa23.42■■□□□ 1.34
CACNA1A-246ENST00000637736 BECN2A8MW95 431 aa23.42■■□□□ 1.34
CACNA1A-246ENST00000637736 IPO7O95373 1038 aaKnown RBP23.42■■□□□ 1.34
CACNA1A-246ENST00000637736 SYNE3Q6ZMZ3 975 aa23.41■■□□□ 1.34
CACNA1A-246ENST00000637736 ATP6V1DQ9Y5K8 247 aa23.41■■□□□ 1.34
CACNA1A-246ENST00000637736 ZNF771Q7L3S4 317 aaPredicted RBP23.4■■□□□ 1.34
CACNA1A-246ENST00000637736 ZNF592Q92610 1267 aa23.4■■□□□ 1.34
CACNA1A-246ENST00000637736 CCDC43Q96MW1 224 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-246ENST00000637736 AMPHP49418 695 aa23.4■■□□□ 1.34
CACNA1A-246ENST00000637736 MCTP1Q6DN14 999 aa23.39■■□□□ 1.34
CACNA1A-246ENST00000637736 CUX2O14529 1486 aa23.39■■□□□ 1.33
CACNA1A-246ENST00000637736 DDX11L8A8MPP1 907 aa23.38■■□□□ 1.33
CACNA1A-246ENST00000637736 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
CACNA1A-246ENST00000637736 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
CACNA1A-246ENST00000637736 NGDNQ8NEJ9 315 aaKnown RBP23.38■■□□□ 1.33
CACNA1A-246ENST00000637736 CT47A1Q5JQC4 288 aaPredicted RBP23.37■■□□□ 1.33
CACNA1A-246ENST00000637736 HSP90AA2PQ14568 343 aaPredicted RBP23.37■■□□□ 1.33
CACNA1A-246ENST00000637736 PKD2Q13563 968 aa23.36■■□□□ 1.33
CACNA1A-246ENST00000637736 CCDC47Q96A33 483 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-246ENST00000637736 ANKRD20A12PQ8NF67 263 aa23.36■■□□□ 1.33
CACNA1A-246ENST00000637736 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
CACNA1A-246ENST00000637736 RILPL2Q969X0 211 aa23.35■■□□□ 1.33
CACNA1A-246ENST00000637736 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
CACNA1A-246ENST00000637736 FBXW7Q969H0 707 aa23.35■■□□□ 1.33
CACNA1A-246ENST00000637736 TRIM29Q14134 588 aa23.35■■□□□ 1.33
CACNA1A-246ENST00000637736 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
CACNA1A-246ENST00000637736 DHX16O60231 1041 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-246ENST00000637736 RUFY1Q96T51 708 aa23.33■■□□□ 1.33
CACNA1A-246ENST00000637736 HSPA5P11021 654 aaKnown RBP23.33■■□□□ 1.33
CACNA1A-246ENST00000637736 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.33
CACNA1A-246ENST00000637736 NAP1L1P55209 391 aaKnown RBP23.33■■□□□ 1.33
CACNA1A-246ENST00000637736 TEX35Q5T0J7 233 aa23.33■■□□□ 1.33
CACNA1A-246ENST00000637736 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.32
CACNA1A-246ENST00000637736 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
CACNA1A-246ENST00000637736 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
CACNA1A-246ENST00000637736 PRDM2Q13029 1718 aa23.32■■□□□ 1.32
CACNA1A-246ENST00000637736 FMN1Q68DA7 1419 aa23.32■■□□□ 1.32
CACNA1A-246ENST00000637736 EVA1CP58658 441 aa23.31■■□□□ 1.32
CACNA1A-246ENST00000637736 NUP155O75694 1391 aa23.3■■□□□ 1.32
CACNA1A-246ENST00000637736 ZFYVE27Q5T4F4 411 aa23.3■■□□□ 1.32
CACNA1A-246ENST00000637736 VPS37DQ86XT2 251 aa23.3■■□□□ 1.32
CACNA1A-246ENST00000637736 R3HCC1Q9Y3T6 440 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-246ENST00000637736 SAMD1Q6SPF0 538 aaPredicted RBP23.29■■□□□ 1.32
CACNA1A-246ENST00000637736 C1orf141Q5JVX7 400 aa23.29■■□□□ 1.32
CACNA1A-246ENST00000637736 MAP7D2Q96T17 732 aa23.29■■□□□ 1.32
CACNA1A-246ENST00000637736 AK7Q96M32 723 aa23.29■■□□□ 1.32
CACNA1A-246ENST00000637736 CPLX2Q6PUV4 134 aaKnown RBP23.28■■□□□ 1.32
CACNA1A-246ENST00000637736 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
CACNA1A-246ENST00000637736 HOMER1Q86YM7 354 aa23.28■■□□□ 1.32
CACNA1A-246ENST00000637736 APPP05067 770 aa23.27■■□□□ 1.32
CACNA1A-246ENST00000637736 PAF1Q8N7H5 531 aa23.27■■□□□ 1.32
CACNA1A-246ENST00000637736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.26■■□□□ 1.31
CACNA1A-246ENST00000637736 CDR1P51861 262 aa23.26■■□□□ 1.31
CACNA1A-246ENST00000637736 CCDC18Q5T9S5 1454 aa23.26■■□□□ 1.31
CACNA1A-246ENST00000637736 HSP90AB2PQ58FF8 381 aa23.25■■□□□ 1.31
CACNA1A-246ENST00000637736 EPS15P42566 896 aa23.24■■□□□ 1.31
CACNA1A-246ENST00000637736 EFCAB2Q5VUJ9 269 aa23.24■■□□□ 1.31
CACNA1A-246ENST00000637736 CLUAP1Q96AJ1 413 aa23.23■■□□□ 1.31
CACNA1A-246ENST00000637736 SKOR2Q2VWA4 1001 aaPredicted RBP23.23■■□□□ 1.31
CACNA1A-246ENST00000637736 KLHL34Q8N239 644 aa23.23■■□□□ 1.31
CACNA1A-246ENST00000637736 NEXNQ0ZGT2 675 aa23.23■■□□□ 1.31
CACNA1A-246ENST00000637736 SMARCA2P51531 1590 aa23.22■■□□□ 1.31
CACNA1A-246ENST00000637736 IPO9Q96P70 1041 aaKnown RBP23.22■■□□□ 1.31
CACNA1A-246ENST00000637736 RUFY2Q8WXA3 655 aa23.22■■□□□ 1.31
CACNA1A-246ENST00000637736 PDE3BQ13370 1112 aa23.21■■□□□ 1.31
CACNA1A-246ENST00000637736 NGEFQ8N5V2 710 aa23.21■■□□□ 1.31
CACNA1A-246ENST00000637736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.19■■□□□ 1.3
CACNA1A-246ENST00000637736 DDX49Q9Y6V7 483 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms