RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
SCN8A-212ENST00000636945 CEP170Q5SW79 1584 aa10.25□□□□□ -0.77
SCN8A-212ENST00000636945 VIRMAQ69YN4 1812 aaKnown RBP10.25□□□□□ -0.77
SCN8A-212ENST00000636945 ABCC5O15440 1437 aa10.25□□□□□ -0.77
SCN8A-212ENST00000636945 EPRSP07814 1512 aaKnown RBP10.25□□□□□ -0.77
SCN8A-212ENST00000636945 PARD3Q8TEW0 1356 aa10.24□□□□□ -0.77
SCN8A-212ENST00000636945 RALBP1Q15311 655 aa10.24□□□□□ -0.77
SCN8A-212ENST00000636945 DCAF11Q8TEB1 546 aa10.24□□□□□ -0.77
SCN8A-212ENST00000636945 FOXD1Q16676 465 aa10.23□□□□□ -0.77
SCN8A-212ENST00000636945 PLEKHH2Q8IVE3 1493 aa10.23□□□□□ -0.77
SCN8A-212ENST00000636945 C8orf34Q49A92 452 aa10.22□□□□□ -0.77
SCN8A-212ENST00000636945 TMC1Q8TDI8 760 aa10.22□□□□□ -0.77
SCN8A-212ENST00000636945 KIAA1107Q9UPP5 1409 aa10.21□□□□□ -0.77
SCN8A-212ENST00000636945 ADGBQ8N7X0 1667 aa10.21□□□□□ -0.77
SCN8A-212ENST00000636945 KIAA0586Q9BVV6 1533 aa10.21□□□□□ -0.77
SCN8A-212ENST00000636945 ADGRL2O95490 1459 aa10.21□□□□□ -0.78
SCN8A-212ENST00000636945 CHIC2Q9UKJ5 165 aa10.21□□□□□ -0.78
SCN8A-212ENST00000636945 PRG4Q92954 1404 aaPredicted RBP10.2□□□□□ -0.78
SCN8A-212ENST00000636945 CROCC2H7BZ55 1655 aa10.19□□□□□ -0.78
SCN8A-212ENST00000636945 KDM5DQ9BY66 1539 aa10.18□□□□□ -0.78
SCN8A-212ENST00000636945 FRAT2O75474 233 aaPredicted RBP10.18□□□□□ -0.78
SCN8A-212ENST00000636945 FAM161AQ3B820 660 aa10.18□□□□□ -0.78
SCN8A-212ENST00000636945 CENPQQ7L2Z9 268 aaPredicted RBP10.17□□□□□ -0.78
SCN8A-212ENST00000636945 NLRP13Q86W25 1043 aa10.17□□□□□ -0.78
SCN8A-212ENST00000636945 CRBNQ96SW2 442 aa10.17□□□□□ -0.78
SCN8A-212ENST00000636945 CDK13Q14004 1512 aaKnown RBP10.16□□□□□ -0.78
SCN8A-212ENST00000636945 LAMC1P11047 1609 aa10.16□□□□□ -0.78
SCN8A-212ENST00000636945 PKNOX2Q96KN3 472 aa10.16□□□□□ -0.78
SCN8A-212ENST00000636945 RRAGDQ9NQL2 400 aaPredicted RBP10.16□□□□□ -0.78
SCN8A-212ENST00000636945 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
SCN8A-212ENST00000636945 SHROOM2Q13796 1616 aa10.15□□□□□ -0.78
SCN8A-212ENST00000636945 USP19O94966 1318 aa10.15□□□□□ -0.78
SCN8A-212ENST00000636945 ERCC6L2Q5T890 1561 aa10.15□□□□□ -0.78
SCN8A-212ENST00000636945 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
SCN8A-212ENST00000636945 NLRP1Q9C000 1473 aa10.15□□□□□ -0.78
SCN8A-212ENST00000636945 EIF5BO60841 1220 aaKnown RBP10.15□□□□□ -0.79
SCN8A-212ENST00000636945 SLC4A3P48751 1232 aa10.15□□□□□ -0.79
SCN8A-212ENST00000636945 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.79
SCN8A-212ENST00000636945 SLC4A1APQ9BWU0 796 aaKnown RBP10.15□□□□□ -0.79
SCN8A-212ENST00000636945 CARMIL2Q6F5E8 1435 aa10.14□□□□□ -0.79
SCN8A-212ENST00000636945 TRPM1Q7Z4N2 1603 aa10.14□□□□□ -0.79
SCN8A-212ENST00000636945 ZNF521Q96K83 1311 aa10.12□□□□□ -0.79
SCN8A-212ENST00000636945 IQGAP2Q13576 1575 aa10.12□□□□□ -0.79
SCN8A-212ENST00000636945 PLIN1O60240 522 aa10.12□□□□□ -0.79
SCN8A-212ENST00000636945 C20orf194Q5TEA3 1177 aa10.11□□□□□ -0.79
SCN8A-212ENST00000636945 ADCY10Q96PN6 1610 aa10.11□□□□□ -0.79
SCN8A-212ENST00000636945 PTPRGP23470 1445 aa10.11□□□□□ -0.79
SCN8A-212ENST00000636945 FSD2A1L4K1 749 aa10.11□□□□□ -0.79
SCN8A-212ENST00000636945 ANTXR1Q9H6X2 564 aa10.11□□□□□ -0.79
SCN8A-212ENST00000636945 COL17A1Q9UMD9 1497 aaPredicted RBP10.11□□□□□ -0.79
SCN8A-212ENST00000636945 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
SCN8A-212ENST00000636945 ITSN2Q9NZM3 1697 aa10.1□□□□□ -0.79
SCN8A-212ENST00000636945 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
SCN8A-212ENST00000636945 NPM1P06748 294 aaKnown RBP eCLIP10.1□□□□□ -0.79
SCN8A-212ENST00000636945 EIF3AQ14152 1382 aaKnown RBP10.1□□□□□ -0.79
SCN8A-212ENST00000636945 CAMSAP2Q08AD1 1489 aa10.09□□□□□ -0.79
SCN8A-212ENST00000636945 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
SCN8A-212ENST00000636945 CLCN1P35523 988 aa10.09□□□□□ -0.79
SCN8A-212ENST00000636945 ZMYM3Q14202 1370 aa10.09□□□□□ -0.79
SCN8A-212ENST00000636945 L1TD1Q5T7N2 865 aaKnown RBP10.09□□□□□ -0.79
SCN8A-212ENST00000636945 POGKQ9P215 609 aa10.09□□□□□ -0.79
SCN8A-212ENST00000636945 ABCC10Q5T3U5 1492 aa10.09□□□□□ -0.79
SCN8A-212ENST00000636945 CCDC144AA2RUR9 1427 aa10.09□□□□□ -0.79
SCN8A-212ENST00000636945 PRDM15P57071 1507 aaPredicted RBP10.08□□□□□ -0.8
SCN8A-212ENST00000636945 ST20-MTHFSA0A0A6YYL1 179 aa10.08□□□□□ -0.8
SCN8A-212ENST00000636945 RRP9O43818 475 aaKnown RBP10.08□□□□□ -0.8
SCN8A-212ENST00000636945 DUSP27Q5VZP5 1158 aa10.08□□□□□ -0.8
SCN8A-212ENST00000636945 TRMT2AQ8IZ69 625 aaKnown RBP10.08□□□□□ -0.8
SCN8A-212ENST00000636945 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
SCN8A-212ENST00000636945 NUP153P49790 1475 aaKnown RBP10.07□□□□□ -0.8
SCN8A-212ENST00000636945 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
SCN8A-212ENST00000636945 CARD11Q9BXL7 1154 aa10.07□□□□□ -0.8
SCN8A-212ENST00000636945 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
SCN8A-212ENST00000636945 ZNF644Q9H582 1327 aaPredicted RBP10.06□□□□□ -0.8
SCN8A-212ENST00000636945 PRAG1Q86YV5 1406 aa10.06□□□□□ -0.8
SCN8A-212ENST00000636945 PLEKHH1Q9ULM0 1364 aa10.05□□□□□ -0.8
SCN8A-212ENST00000636945 ABCC2Q92887 1545 aa10.05□□□□□ -0.8
SCN8A-212ENST00000636945 DISP1Q96F81 1524 aa10.05□□□□□ -0.8
SCN8A-212ENST00000636945 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
SCN8A-212ENST00000636945 PKD2Q13563 968 aa10.05□□□□□ -0.8
SCN8A-212ENST00000636945 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
SCN8A-212ENST00000636945 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
SCN8A-212ENST00000636945 GPATCH8Q9UKJ3 1502 aaKnown RBP10.04□□□□□ -0.8
SCN8A-212ENST00000636945 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
SCN8A-212ENST00000636945 XRCC6P12956 609 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCN8A-212ENST00000636945 KIAA0556O60303 1618 aa10.03□□□□□ -0.8
SCN8A-212ENST00000636945 ANKRD50Q9ULJ7 1429 aa10.03□□□□□ -0.8
SCN8A-212ENST00000636945 RNF17Q9BXT8 1623 aaKnown RBP10.02□□□□□ -0.8
SCN8A-212ENST00000636945 TESK2Q96S53 571 aa10.02□□□□□ -0.81
SCN8A-212ENST00000636945 POLR3GLQ9BT43 218 aa10.02□□□□□ -0.81
SCN8A-212ENST00000636945 CENPJQ9HC77 1338 aaPredicted RBP10.02□□□□□ -0.81
SCN8A-212ENST00000636945 CNGB1Q14028 1251 aaPredicted RBP10.01□□□□□ -0.81
SCN8A-212ENST00000636945 TROQ12816 1431 aaPredicted RBP10.01□□□□□ -0.81
SCN8A-212ENST00000636945 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
SCN8A-212ENST00000636945 SLFN5Q08AF3 891 aa10□□□□□ -0.81
SCN8A-212ENST00000636945 DISP3Q9P2K9 1392 aa10□□□□□ -0.81
SCN8A-212ENST00000636945 EIF2AK4Q9P2K8 1649 aaKnown RBP10□□□□□ -0.81
SCN8A-212ENST00000636945 SEC24BO95487 1268 aa9.99□□□□□ -0.81
SCN8A-212ENST00000636945 WDR7Q9Y4E6 1490 aa9.99□□□□□ -0.81
SCN8A-212ENST00000636945 RTEL1-TNFRSF6BF6WH68 1400 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms